RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 LPIN1Q14693 890 aa17.17■□□□□ 0.34
VAPA-209ENST00000585042 UBE2SQ16763 222 aa17.17■□□□□ 0.34
VAPA-209ENST00000585042 TSGA10IPQ3SY00 556 aa17.17■□□□□ 0.34
VAPA-209ENST00000585042 FBXO47Q5MNV8 452 aa17.17■□□□□ 0.34
VAPA-209ENST00000585042 IER5Q5VY09 327 aa17.17■□□□□ 0.34
VAPA-209ENST00000585042 PPP1R18Q6NYC8 613 aa17.17■□□□□ 0.34
VAPA-209ENST00000585042 RUFY4Q6ZNE9 571 aa17.17■□□□□ 0.34
VAPA-209ENST00000585042 TSHZ1Q6ZSZ6 1077 aa17.17■□□□□ 0.34
VAPA-209ENST00000585042 PLPPR4Q7Z2D5 763 aa17.17■□□□□ 0.34
VAPA-209ENST00000585042 HEATR3Q7Z4Q2 680 aa17.17■□□□□ 0.34
VAPA-209ENST00000585042 CCDC82Q8N4S0 544 aa17.17■□□□□ 0.34
VAPA-209ENST00000585042 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.17■□□□□ 0.34
VAPA-209ENST00000585042 CLP1Q92989 425 aaKnown RBP17.17■□□□□ 0.34
VAPA-209ENST00000585042 FTHL17Q9BXU8 183 aa17.17■□□□□ 0.34
VAPA-209ENST00000585042 EPHX3Q9H6B9 360 aa17.17■□□□□ 0.34
VAPA-209ENST00000585042 AZI2Q9H6S1 392 aa17.17■□□□□ 0.34
VAPA-209ENST00000585042 JPH1Q9HDC5 661 aaPredicted RBP17.17■□□□□ 0.34
VAPA-209ENST00000585042 RIC8AQ9NPQ8 531 aa17.17■□□□□ 0.34
VAPA-209ENST00000585042 ANO2Q9NQ90 1003 aa17.17■□□□□ 0.34
VAPA-209ENST00000585042 KCNH7Q9NS40 1196 aa17.17■□□□□ 0.34
VAPA-209ENST00000585042 SLC9A2Q9UBY0 812 aa17.17■□□□□ 0.34
VAPA-209ENST00000585042 RALGAPA2Q2PPJ7 1873 aa17.16■□□□□ 0.34
VAPA-209ENST00000585042 GRXCR2A6NFK2 248 aa17.16■□□□□ 0.34
VAPA-209ENST00000585042 GHRP10912 638 aa17.16■□□□□ 0.34
VAPA-209ENST00000585042 KCNA5P22460 613 aa17.16■□□□□ 0.34
VAPA-209ENST00000585042 SLC26A2P50443 739 aa17.16■□□□□ 0.34
VAPA-209ENST00000585042 IRX6P78412 446 aaPredicted RBP17.16■□□□□ 0.34
VAPA-209ENST00000585042 EXOSC10Q01780 885 aaKnown RBP17.16■□□□□ 0.34
VAPA-209ENST00000585042 TMEM31Q5JXX7 168 aa17.16■□□□□ 0.34
VAPA-209ENST00000585042 APOA5Q6Q788 366 aa17.16■□□□□ 0.34
VAPA-209ENST00000585042 NME8Q8N427 588 aa17.16■□□□□ 0.34
VAPA-209ENST00000585042 DNAJB3Q8WWF6 145 aa17.16■□□□□ 0.34
VAPA-209ENST00000585042 ZNF689Q96CS4 500 aaPredicted RBP17.16■□□□□ 0.34
VAPA-209ENST00000585042 PABPC5Q96DU9 382 aaKnown RBP17.16■□□□□ 0.34
VAPA-209ENST00000585042 NEK1Q96PY6 1258 aa17.16■□□□□ 0.34
VAPA-209ENST00000585042 SDF4Q9BRK5 362 aa17.16■□□□□ 0.34
VAPA-209ENST00000585042 C11orf84Q9BUA3 381 aaPredicted RBP17.16■□□□□ 0.34
VAPA-209ENST00000585042 NSUN3Q9H649 340 aaKnown RBP17.16■□□□□ 0.34
VAPA-209ENST00000585042 FAM50BQ9Y247 325 aa17.16■□□□□ 0.34
VAPA-209ENST00000585042 ATG7O95352 703 aa17.15■□□□□ 0.34
VAPA-209ENST00000585042 INSRRP14616 1297 aa17.15■□□□□ 0.34
VAPA-209ENST00000585042 MARK3P27448 753 aa17.15■□□□□ 0.34
VAPA-209ENST00000585042 RCAN1P53805 252 aa17.15■□□□□ 0.34
VAPA-209ENST00000585042 MRPS6P82932 125 aaKnown RBP17.15■□□□□ 0.34
VAPA-209ENST00000585042 COL9A3Q14050 684 aaPredicted RBP17.15■□□□□ 0.34
VAPA-209ENST00000585042 CEP55Q53EZ4 464 aa17.15■□□□□ 0.34
VAPA-209ENST00000585042 BMP2KLQ5H9B9 411 aa17.15■□□□□ 0.34
VAPA-209ENST00000585042 PTCRAQ6ISU1 281 aaPredicted RBP17.15■□□□□ 0.34
VAPA-209ENST00000585042 DHX32Q7L7V1 743 aaKnown RBP17.15■□□□□ 0.34
VAPA-209ENST00000585042 NIPA1Q7RTP0 329 aa17.15■□□□□ 0.34
VAPA-209ENST00000585042 MICU3Q86XE3 530 aa17.15■□□□□ 0.34
VAPA-209ENST00000585042 PCYT2Q99447 389 aa17.15■□□□□ 0.34
VAPA-209ENST00000585042 LRFN3Q9BTN0 628 aa17.15■□□□□ 0.34
VAPA-209ENST00000585042 PLVAPQ9BX97 442 aa17.15■□□□□ 0.34
VAPA-209ENST00000585042 RC3H2Q9HBD1 1191 aaKnown RBP17.15■□□□□ 0.34
VAPA-209ENST00000585042 PCDHA2Q9Y5H9 948 aa17.15■□□□□ 0.34
VAPA-209ENST00000585042 CDY2AQ9Y6F7 541 aa17.15■□□□□ 0.34
VAPA-209ENST00000585042 hCG_1642624A0A1W2PR95 340 aa17.14■□□□□ 0.33
VAPA-209ENST00000585042 M0QZ92 97 aa17.14■□□□□ 0.33
VAPA-209ENST00000585042 MEIS1O00470 390 aa17.14■□□□□ 0.33
VAPA-209ENST00000585042 PLA2G5P39877 138 aa17.14■□□□□ 0.33
VAPA-209ENST00000585042 STAT5BP51692 787 aa17.14■□□□□ 0.33
VAPA-209ENST00000585042 NAPAP54920 295 aa17.14■□□□□ 0.33
VAPA-209ENST00000585042 FUT2Q10981 343 aa17.14■□□□□ 0.33
VAPA-209ENST00000585042 AP3B2Q13367 1082 aa17.14■□□□□ 0.33
VAPA-209ENST00000585042 NAALADL2Q58DX5 795 aa17.14■□□□□ 0.33
VAPA-209ENST00000585042 WWC2Q6AWC2 1192 aa17.14■□□□□ 0.33
VAPA-209ENST00000585042 GJD3Q8N144 294 aa17.14■□□□□ 0.33
VAPA-209ENST00000585042 LRRC2Q9BYS8 371 aa17.14■□□□□ 0.33
VAPA-209ENST00000585042 TTC3P53804 2025 aa17.14■□□□□ 0.33
VAPA-209ENST00000585042 ADGRA3Q8IWK6 1321 aa17.14■□□□□ 0.33
VAPA-209ENST00000585042 NLRC5Q86WI3 1866 aa17.14■□□□□ 0.33
VAPA-209ENST00000585042 SMIM35A0A1B0GVV1 85 aa17.13■□□□□ 0.33
VAPA-209ENST00000585042 ZBTB43O43298 467 aa17.13■□□□□ 0.33
VAPA-209ENST00000585042 DGKIO75912 1065 aa17.13■□□□□ 0.33
VAPA-209ENST00000585042 HMGB1P09429 215 aaKnown RBP17.13■□□□□ 0.33
VAPA-209ENST00000585042 LINC00271P0C7V0 271 aa17.13■□□□□ 0.33
VAPA-209ENST00000585042 CTNNB1P35222 781 aa17.13■□□□□ 0.33
VAPA-209ENST00000585042 ADCY7P51828 1080 aa17.13■□□□□ 0.33
VAPA-209ENST00000585042 ACTR2P61160 394 aa17.13■□□□□ 0.33
VAPA-209ENST00000585042 KRT32Q14532 448 aa17.13■□□□□ 0.33
VAPA-209ENST00000585042 TCEAL5Q5H9L2 206 aa17.13■□□□□ 0.33
VAPA-209ENST00000585042 MCTP2Q6DN12 878 aa17.13■□□□□ 0.33
VAPA-209ENST00000585042 CRIPAKQ8N1N5 446 aa17.13■□□□□ 0.33
VAPA-209ENST00000585042 P2RX5Q93086 422 aa17.13■□□□□ 0.33
VAPA-209ENST00000585042 CD320Q9NPF0 282 aa17.13■□□□□ 0.33
VAPA-209ENST00000585042 BARHL2Q9NY43 387 aa17.13■□□□□ 0.33
VAPA-209ENST00000585042 PKD2L1Q9P0L9 805 aa17.13■□□□□ 0.33
VAPA-209ENST00000585042 PRKAG3Q9UGI9 489 aa17.13■□□□□ 0.33
VAPA-209ENST00000585042 V9GY48 417 aaPredicted RBP17.13■□□□□ 0.33
VAPA-209ENST00000585042 CNTNAP5Q8WYK1 1306 aa17.13■□□□□ 0.33
VAPA-209ENST00000585042 KDM3AQ9Y4C1 1321 aa17.13■□□□□ 0.33
VAPA-209ENST00000585042 IGKV6D-21A0A0A0MT36 114 aa17.12■□□□□ 0.33
VAPA-209ENST00000585042 SMCO2A6NFE2 343 aa17.12■□□□□ 0.33
VAPA-209ENST00000585042 STAG3L1P0CL83 205 aa17.12■□□□□ 0.33
VAPA-209ENST00000585042 SREBF1P36956 1147 aa17.12■□□□□ 0.33
VAPA-209ENST00000585042 CLK2P49760 499 aaKnown RBP17.12■□□□□ 0.33
VAPA-209ENST00000585042 IGBP1P78318 339 aa17.12■□□□□ 0.33
VAPA-209ENST00000585042 BTG3Q14201 252 aaPredicted RBP17.12■□□□□ 0.33
VAPA-209ENST00000585042 PLCB4Q15147 1175 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms