RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 BARHL2Q9NY43 387 aa23.33■■□□□ 1.33
TOP3A-219ENST00000584887 COG5Q9UP83 839 aa23.33■■□□□ 1.33
TOP3A-219ENST00000584887 TRANK1O15050 2925 aa23.33■■□□□ 1.33
TOP3A-219ENST00000584887 BRWD1Q9NSI6 2320 aa23.33■■□□□ 1.33
TOP3A-219ENST00000584887 SIP14410 1827 aa23.32■■□□□ 1.32
TOP3A-219ENST00000584887 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.32■■□□□ 1.32
TOP3A-219ENST00000584887 ARP10275 920 aa23.32■■□□□ 1.32
TOP3A-219ENST00000584887 HTRA4P83105 476 aaPredicted RBP23.32■■□□□ 1.32
TOP3A-219ENST00000584887 CEP55Q53EZ4 464 aa23.32■■□□□ 1.32
TOP3A-219ENST00000584887 Q6ZUG5 572 aa23.32■■□□□ 1.32
TOP3A-219ENST00000584887 DNAJB3Q8WWF6 145 aa23.32■■□□□ 1.32
TOP3A-219ENST00000584887 HLA-CQ95604 372 aa23.32■■□□□ 1.32
TOP3A-219ENST00000584887 ZBTB10Q96DT7 871 aa23.32■■□□□ 1.32
TOP3A-219ENST00000584887 PCYT2Q99447 389 aa23.32■■□□□ 1.32
TOP3A-219ENST00000584887 DDX39AO00148 427 aaKnown RBP23.31■■□□□ 1.32
TOP3A-219ENST00000584887 BMP1P13497 986 aa23.31■■□□□ 1.32
TOP3A-219ENST00000584887 ADD1P35611 737 aaKnown RBP23.31■■□□□ 1.32
TOP3A-219ENST00000584887 ACTR2P61160 394 aa23.31■■□□□ 1.32
TOP3A-219ENST00000584887 AP3B2Q13367 1082 aa23.31■■□□□ 1.32
TOP3A-219ENST00000584887 JAKMIP3Q5VZ66 844 aa23.31■■□□□ 1.32
TOP3A-219ENST00000584887 BRF1Q92994 677 aa23.31■■□□□ 1.32
TOP3A-219ENST00000584887 TOP1MTQ969P6 601 aa23.31■■□□□ 1.32
TOP3A-219ENST00000584887 GLT8D2Q9H1C3 349 aa23.31■■□□□ 1.32
TOP3A-219ENST00000584887 LMCD1Q9NZU5 365 aa23.31■■□□□ 1.32
TOP3A-219ENST00000584887 CDY2AQ9Y6F7 541 aa23.31■■□□□ 1.32
TOP3A-219ENST00000584887 CCDC196A0A1B0GTZ2 297 aa23.3■■□□□ 1.32
TOP3A-219ENST00000584887 INSRRP14616 1297 aa23.3■■□□□ 1.32
TOP3A-219ENST00000584887 SREBF1P36956 1147 aa23.3■■□□□ 1.32
TOP3A-219ENST00000584887 RCAN1P53805 252 aa23.3■■□□□ 1.32
TOP3A-219ENST00000584887 LPIN1Q14693 890 aa23.3■■□□□ 1.32
TOP3A-219ENST00000584887 BLOC1S2Q6QNY1 142 aa23.3■■□□□ 1.32
TOP3A-219ENST00000584887 SP7Q8TDD2 431 aaPredicted RBP23.3■■□□□ 1.32
TOP3A-219ENST00000584887 AGO4Q9HCK5 861 aaKnown RBP23.3■■□□□ 1.32
TOP3A-219ENST00000584887 NFASCO94856 1347 aa23.3■■□□□ 1.32
TOP3A-219ENST00000584887 MBLAC1A4D2B0 266 aaPredicted RBP23.29■■□□□ 1.32
TOP3A-219ENST00000584887 RRN3P2A6NIE6 340 aa23.29■■□□□ 1.32
TOP3A-219ENST00000584887 SCG2P13521 617 aa23.29■■□□□ 1.32
TOP3A-219ENST00000584887 MGAT3Q09327 533 aa23.29■■□□□ 1.32
TOP3A-219ENST00000584887 ITGB3BPQ13352 177 aaPredicted RBP23.29■■□□□ 1.32
TOP3A-219ENST00000584887 MARCH8Q5T0T0 291 aa23.29■■□□□ 1.32
TOP3A-219ENST00000584887 RPAINQ86UA6 219 aa23.29■■□□□ 1.32
TOP3A-219ENST00000584887 TEX2Q8IWB9 1127 aa23.29■■□□□ 1.32
TOP3A-219ENST00000584887 TRAPPC12Q8WVT3 735 aa23.29■■□□□ 1.32
TOP3A-219ENST00000584887 UIMC1Q96RL1 719 aa23.29■■□□□ 1.32
TOP3A-219ENST00000584887 SNX14Q9Y5W7 946 aa23.29■■□□□ 1.32
TOP3A-219ENST00000584887 STAT5BP51692 787 aa23.28■■□□□ 1.32
TOP3A-219ENST00000584887 MRPS6P82932 125 aaKnown RBP23.28■■□□□ 1.32
TOP3A-219ENST00000584887 PLCB4Q15147 1175 aa23.28■■□□□ 1.32
TOP3A-219ENST00000584887 PFKFB3Q16875 520 aaPredicted RBP23.28■■□□□ 1.32
TOP3A-219ENST00000584887 EPC2Q52LR7 807 aa23.28■■□□□ 1.32
TOP3A-219ENST00000584887 PLA2G4DQ86XP0 818 aa23.28■■□□□ 1.32
TOP3A-219ENST00000584887 M0QZ92 97 aa23.27■■□□□ 1.32
TOP3A-219ENST00000584887 MEIS1O00470 390 aa23.27■■□□□ 1.32
TOP3A-219ENST00000584887 BACH1O14867 736 aa23.27■■□□□ 1.32
TOP3A-219ENST00000584887 HSPA4P34932 840 aa23.27■■□□□ 1.32
TOP3A-219ENST00000584887 TMEM62Q0P6H9 643 aa23.27■■□□□ 1.32
TOP3A-219ENST00000584887 FBXO47Q5MNV8 452 aa23.27■■□□□ 1.32
TOP3A-219ENST00000584887 TNPO1Q92973 898 aaKnown RBP23.27■■□□□ 1.32
TOP3A-219ENST00000584887 SAMD11Q96NU1 681 aa23.27■■□□□ 1.32
TOP3A-219ENST00000584887 PPFIA3O75145 1194 aa23.26■■□□□ 1.31
TOP3A-219ENST00000584887 CLK2P49760 499 aaKnown RBP23.26■■□□□ 1.31
TOP3A-219ENST00000584887 AKAP17AQ02040 695 aaKnown RBP23.26■■□□□ 1.31
TOP3A-219ENST00000584887 TSHZ1Q6ZSZ6 1077 aa23.26■■□□□ 1.31
TOP3A-219ENST00000584887 TMEM192Q8IY95 271 aa23.26■■□□□ 1.31
TOP3A-219ENST00000584887 KCNB2Q92953 911 aa23.26■■□□□ 1.31
TOP3A-219ENST00000584887 IL17RAQ96F46 866 aa23.26■■□□□ 1.31
TOP3A-219ENST00000584887 POTEB3A0JP26 581 aa23.25■■□□□ 1.31
TOP3A-219ENST00000584887 CCNE2O96020 404 aa23.25■■□□□ 1.31
TOP3A-219ENST00000584887 RPS6KB1P23443 525 aa23.25■■□□□ 1.31
TOP3A-219ENST00000584887 CD52P31358 61 aa23.25■■□□□ 1.31
TOP3A-219ENST00000584887 GPM6BQ13491 265 aa23.25■■□□□ 1.31
TOP3A-219ENST00000584887 PTPROQ16827 1216 aa23.25■■□□□ 1.31
TOP3A-219ENST00000584887 IER5Q5VY09 327 aa23.25■■□□□ 1.31
TOP3A-219ENST00000584887 POTEBQ6S5H4 581 aa23.25■■□□□ 1.31
TOP3A-219ENST00000584887 PLPPR4Q7Z2D5 763 aa23.25■■□□□ 1.31
TOP3A-219ENST00000584887 REXO1Q8N1G1 1221 aaKnown RBP23.25■■□□□ 1.31
TOP3A-219ENST00000584887 CCDC12Q8WUD4 166 aaPredicted RBP23.25■■□□□ 1.31
TOP3A-219ENST00000584887 PHKBQ93100 1093 aa23.25■■□□□ 1.31
TOP3A-219ENST00000584887 C6orf50Q9HD87 102 aa23.25■■□□□ 1.31
TOP3A-219ENST00000584887 TRPV2Q9Y5S1 764 aa23.25■■□□□ 1.31
TOP3A-219ENST00000584887 FAM86B1E9PN63 330 aa23.24■■□□□ 1.31
TOP3A-219ENST00000584887 REC8O95072 547 aa23.24■■□□□ 1.31
TOP3A-219ENST00000584887 RPLP2P05387 115 aaKnown RBP23.24■■□□□ 1.31
TOP3A-219ENST00000584887 FAM86B2P0C5J1 330 aa23.24■■□□□ 1.31
TOP3A-219ENST00000584887 CTNNB1P35222 781 aa23.24■■□□□ 1.31
TOP3A-219ENST00000584887 FAM160B1Q5W0V3 765 aa23.24■■□□□ 1.31
TOP3A-219ENST00000584887 NIPA1Q7RTP0 329 aa23.24■■□□□ 1.31
TOP3A-219ENST00000584887 FIBCD1Q8N539 461 aa23.24■■□□□ 1.31
TOP3A-219ENST00000584887 MRPL38Q96DV4 380 aaKnown RBP23.24■■□□□ 1.31
TOP3A-219ENST00000584887 UBE2ZQ9H832 354 aaPredicted RBP23.24■■□□□ 1.31
TOP3A-219ENST00000584887 AGO3Q9H9G7 860 aaKnown RBP23.24■■□□□ 1.31
TOP3A-219ENST00000584887 SPTBN5Q9NRC6 3674 aaKnown RBP23.23■■□□□ 1.31
TOP3A-219ENST00000584887 REV3LO60673 3130 aa23.23■■□□□ 1.31
TOP3A-219ENST00000584887 ESYT2A0FGR8 921 aa23.23■■□□□ 1.31
TOP3A-219ENST00000584887 ADAMTS3O15072 1205 aa23.23■■□□□ 1.31
TOP3A-219ENST00000584887 IBSPP21815 317 aaPredicted RBP23.23■■□□□ 1.31
TOP3A-219ENST00000584887 PSMA5P28066 241 aa23.23■■□□□ 1.31
TOP3A-219ENST00000584887 SLC26A6Q9BXS9 759 aa23.23■■□□□ 1.31
TOP3A-219ENST00000584887 TCEAL9Q9UHQ7 104 aa23.23■■□□□ 1.31
TOP3A-219ENST00000584887 PCDHA2Q9Y5H9 948 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms