RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 SMARCAD1Q9H4L7 1026 aa20.53■□□□□ 0.88
SRSF1-208ENST00000584773 NRCAMQ92823 1304 aa20.52■□□□□ 0.88
SRSF1-208ENST00000584773 EPOPA6NHQ4 379 aa20.52■□□□□ 0.87
SRSF1-208ENST00000584773 CENPBP07199 599 aaPredicted RBP20.52■□□□□ 0.87
SRSF1-208ENST00000584773 CYP3A4P08684 503 aa20.52■□□□□ 0.87
SRSF1-208ENST00000584773 GNAT1P11488 350 aa20.52■□□□□ 0.87
SRSF1-208ENST00000584773 MARCH8Q5T0T0 291 aa20.52■□□□□ 0.87
SRSF1-208ENST00000584773 FAM117BQ6P1L5 589 aa20.52■□□□□ 0.87
SRSF1-208ENST00000584773 TRAPPC12Q8WVT3 735 aa20.52■□□□□ 0.87
SRSF1-208ENST00000584773 ZNF274Q96GC6 653 aaPredicted RBP20.52■□□□□ 0.87
SRSF1-208ENST00000584773 GAS2L1Q99501 681 aaPredicted RBP20.52■□□□□ 0.87
SRSF1-208ENST00000584773 DHX15O43143 795 aaKnown RBP20.51■□□□□ 0.87
SRSF1-208ENST00000584773 TLL1O43897 1013 aa20.51■□□□□ 0.87
SRSF1-208ENST00000584773 IGFBP4P22692 258 aa20.51■□□□□ 0.87
SRSF1-208ENST00000584773 GNA11P29992 359 aa20.51■□□□□ 0.87
SRSF1-208ENST00000584773 SSRP1Q08945 709 aaKnown RBP20.51■□□□□ 0.87
SRSF1-208ENST00000584773 PLCB4Q15147 1175 aa20.51■□□□□ 0.87
SRSF1-208ENST00000584773 PLEKHG4Q58EX7 1191 aa20.51■□□□□ 0.87
SRSF1-208ENST00000584773 NIPA1Q7RTP0 329 aa20.51■□□□□ 0.87
SRSF1-208ENST00000584773 CCDC148Q8NFR7 591 aa20.51■□□□□ 0.87
SRSF1-208ENST00000584773 PRDM6Q9NQX0 595 aa20.51■□□□□ 0.87
SRSF1-208ENST00000584773 TUBE1Q9UJT0 475 aa20.51■□□□□ 0.87
SRSF1-208ENST00000584773 ABHD14A-ACY1A0A1B0GW23 586 aa20.5■□□□□ 0.87
SRSF1-208ENST00000584773 CPLX1O14810 134 aa20.5■□□□□ 0.87
SRSF1-208ENST00000584773 CHRNA1P02708 482 aa20.5■□□□□ 0.87
SRSF1-208ENST00000584773 INSRRP14616 1297 aa20.5■□□□□ 0.87
SRSF1-208ENST00000584773 NLRP5P59047 1200 aa20.5■□□□□ 0.87
SRSF1-208ENST00000584773 TAP1Q03518 808 aa20.5■□□□□ 0.87
SRSF1-208ENST00000584773 SCRN1Q12765 414 aa20.5■□□□□ 0.87
SRSF1-208ENST00000584773 MKRN4PQ13434 485 aaPredicted RBP20.5■□□□□ 0.87
SRSF1-208ENST00000584773 IKBKEQ14164 716 aa20.5■□□□□ 0.87
SRSF1-208ENST00000584773 DNAJB3Q8WWF6 145 aa20.5■□□□□ 0.87
SRSF1-208ENST00000584773 AZI2Q9H6S1 392 aa20.5■□□□□ 0.87
SRSF1-208ENST00000584773 TPCN1Q9ULQ1 816 aa20.5■□□□□ 0.87
SRSF1-208ENST00000584773 TRPC6Q9Y210 931 aa20.5■□□□□ 0.87
SRSF1-208ENST00000584773 ATG7O95352 703 aa20.49■□□□□ 0.87
SRSF1-208ENST00000584773 SEC24BO95487 1268 aa20.49■□□□□ 0.87
SRSF1-208ENST00000584773 STAT5BP51692 787 aa20.49■□□□□ 0.87
SRSF1-208ENST00000584773 MGAT3Q09327 533 aa20.49■□□□□ 0.87
SRSF1-208ENST00000584773 PRR16Q569H4 304 aa20.49■□□□□ 0.87
SRSF1-208ENST00000584773 CCDC60Q8IWA6 550 aaPredicted RBP20.49■□□□□ 0.87
SRSF1-208ENST00000584773 TRIM22Q8IYM9 498 aa20.49■□□□□ 0.87
SRSF1-208ENST00000584773 ZNF577Q9BSK1 485 aa20.49■□□□□ 0.87
SRSF1-208ENST00000584773 MBLAC1A4D2B0 266 aaPredicted RBP20.48■□□□□ 0.87
SRSF1-208ENST00000584773 IPO5O00410 1097 aaKnown RBP20.48■□□□□ 0.87
SRSF1-208ENST00000584773 CAND2O75155 1236 aa20.48■□□□□ 0.87
SRSF1-208ENST00000584773 GHRP10912 638 aa20.48■□□□□ 0.87
SRSF1-208ENST00000584773 CCDC85BQ15834 202 aaPredicted RBP20.48■□□□□ 0.87
SRSF1-208ENST00000584773 FAM26DQ5JW98 314 aa20.48■□□□□ 0.87
SRSF1-208ENST00000584773 ABHD15Q6UXT9 468 aa20.48■□□□□ 0.87
SRSF1-208ENST00000584773 ARNTL2Q8WYA1 636 aa20.48■□□□□ 0.87
SRSF1-208ENST00000584773 GJA10Q969M2 543 aa20.48■□□□□ 0.87
SRSF1-208ENST00000584773 LENG9Q96B70 501 aa20.48■□□□□ 0.87
SRSF1-208ENST00000584773 ZBED2Q9BTP6 218 aa20.48■□□□□ 0.87
SRSF1-208ENST00000584773 FAM49AQ9H0Q0 323 aaPredicted RBP20.48■□□□□ 0.87
SRSF1-208ENST00000584773 VCANP13611 3396 aa20.47■□□□□ 0.87
SRSF1-208ENST00000584773 COL4A4P53420 1690 aaPredicted RBP20.47■□□□□ 0.87
SRSF1-208ENST00000584773 LOXHD1Q8IVV2 1947 aa20.47■□□□□ 0.87
SRSF1-208ENST00000584773 IGKV6D-21A0A0A0MT36 114 aa20.47■□□□□ 0.87
SRSF1-208ENST00000584773 KIF28PB7ZC32 967 aa20.47■□□□□ 0.87
SRSF1-208ENST00000584773 GJB5O95377 273 aa20.47■□□□□ 0.87
SRSF1-208ENST00000584773 DEXIO95424 95 aa20.47■□□□□ 0.87
SRSF1-208ENST00000584773 AK2P54819 239 aa20.47■□□□□ 0.87
SRSF1-208ENST00000584773 NPY5RQ15761 445 aa20.47■□□□□ 0.87
SRSF1-208ENST00000584773 KRT40Q6A162 431 aa20.47■□□□□ 0.87
SRSF1-208ENST00000584773 MYOCDQ8IZQ8 938 aa20.47■□□□□ 0.87
SRSF1-208ENST00000584773 BICD2Q8TD16 824 aa20.47■□□□□ 0.87
SRSF1-208ENST00000584773 SEPT8Q92599 483 aa20.47■□□□□ 0.87
SRSF1-208ENST00000584773 SH3GLB2Q9NR46 395 aa20.47■□□□□ 0.87
SRSF1-208ENST00000584773 KCNJ14Q9UNX9 436 aa20.47■□□□□ 0.87
SRSF1-208ENST00000584773 REV3LO60673 3130 aa20.46■□□□□ 0.87
SRSF1-208ENST00000584773 WDR81Q562E7 1941 aa20.46■□□□□ 0.87
SRSF1-208ENST00000584773 SPTBN5Q9NRC6 3674 aaKnown RBP20.46■□□□□ 0.87
SRSF1-208ENST00000584773 DLL1O00548 723 aa20.46■□□□□ 0.87
SRSF1-208ENST00000584773 BACH1O14867 736 aa20.46■□□□□ 0.87
SRSF1-208ENST00000584773 LARGE1O95461 756 aa20.46■□□□□ 0.87
SRSF1-208ENST00000584773 CIITAP33076 1130 aa20.46■□□□□ 0.87
SRSF1-208ENST00000584773 SETQ01105 290 aaPredicted RBP20.46■□□□□ 0.87
SRSF1-208ENST00000584773 TMEM62Q0P6H9 643 aa20.46■□□□□ 0.87
SRSF1-208ENST00000584773 TAF2Q6P1X5 1199 aa20.46■□□□□ 0.87
SRSF1-208ENST00000584773 PLPPR4Q7Z2D5 763 aa20.46■□□□□ 0.87
SRSF1-208ENST00000584773 MICALL1Q8N3F8 863 aa20.46■□□□□ 0.87
SRSF1-208ENST00000584773 SLKQ9H2G2 1235 aaPredicted RBP20.46■□□□□ 0.87
SRSF1-208ENST00000584773 GJB4Q9NTQ9 266 aa20.46■□□□□ 0.87
SRSF1-208ENST00000584773 PCDHA4Q9UN74 947 aa20.46■□□□□ 0.87
SRSF1-208ENST00000584773 CDY2AQ9Y6F7 541 aa20.46■□□□□ 0.87
SRSF1-208ENST00000584773 PRRC2BQ5JSZ5 2229 aaKnown RBP20.45■□□□□ 0.86
SRSF1-208ENST00000584773 MYH9P35579 1960 aaKnown RBP20.45■□□□□ 0.86
SRSF1-208ENST00000584773 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.45■□□□□ 0.86
SRSF1-208ENST00000584773 POTEB3A0JP26 581 aa20.45■□□□□ 0.86
SRSF1-208ENST00000584773 ATP4AP20648 1035 aa20.45■□□□□ 0.86
SRSF1-208ENST00000584773 LPIN1Q14693 890 aa20.45■□□□□ 0.86
SRSF1-208ENST00000584773 MCTP2Q6DN12 878 aa20.45■□□□□ 0.86
SRSF1-208ENST00000584773 SWSAP1Q6NVH7 229 aa20.45■□□□□ 0.86
SRSF1-208ENST00000584773 POTEBQ6S5H4 581 aa20.45■□□□□ 0.86
SRSF1-208ENST00000584773 TRMT1LQ7Z2T5 733 aaKnown RBP20.45■□□□□ 0.86
SRSF1-208ENST00000584773 RPAINQ86UA6 219 aa20.45■□□□□ 0.86
SRSF1-208ENST00000584773 TBCKQ8TEA7 893 aa20.45■□□□□ 0.86
SRSF1-208ENST00000584773 IFIH1Q9BYX4 1025 aaKnown RBP20.45■□□□□ 0.86
SRSF1-208ENST00000584773 ZNF302Q9NR11 478 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 300.6 ms