RNA–Protein interactions for RNA: ENST00000584054.5

EIF4A1-231, Transcript of eukaryotic translation initiation factor 4A1, human

TSL 2

Gene EIF4A1, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EIF4A1-231	ENST00000584054	NEK9	Q8TD19	979 aa		11.23	□□□□□ -0.61
EIF4A1-231	ENST00000584054	SPATA33	Q96N06	139 aa		11.23	□□□□□ -0.61
EIF4A1-231	ENST00000584054	CEP89	Q96ST8	783 aa		11.23	□□□□□ -0.61
EIF4A1-231	ENST00000584054	RNF208	Q9H0X6	261 aa		11.23	□□□□□ -0.61
EIF4A1-231	ENST00000584054	MLXIP	Q9HAP2	919 aa		11.23	□□□□□ -0.61
EIF4A1-231	ENST00000584054	XPNPEP3	Q9NQH7	507 aa		11.23	□□□□□ -0.61
EIF4A1-231	ENST00000584054	DISC1	Q9NRI5	854 aa		11.23	□□□□□ -0.61
EIF4A1-231	ENST00000584054	PHF24	Q9UPV7	400 aa		11.23	□□□□□ -0.61
EIF4A1-231	ENST00000584054	IGSF9B	Q9UPX0	1349 aa		11.23	□□□□□ -0.61
EIF4A1-231	ENST00000584054	FRMPD3	Q5JV73	1810 aa		11.23	□□□□□ -0.61
EIF4A1-231	ENST00000584054	MOXD2P	A6NHM9	499 aa		11.22	□□□□□ -0.61
EIF4A1-231	ENST00000584054	DNM1L	O00429	736 aa		11.22	□□□□□ -0.61
EIF4A1-231	ENST00000584054	ZNF862	O60290	1169 aa		11.22	□□□□□ -0.61
EIF4A1-231	ENST00000584054	CUTA	O60888	179 aa		11.22	□□□□□ -0.61
EIF4A1-231	ENST00000584054	P4HB	P07237	508 aa	Known RBP	11.22	□□□□□ -0.61
EIF4A1-231	ENST00000584054	XRCC6	P12956	609 aa	Known RBP eCLIP	11.22	□□□□□ -0.61	1e-6	■■■□□ 17.2
EIF4A1-231	ENST00000584054	TEC	P42680	631 aa		11.22	□□□□□ -0.61
EIF4A1-231	ENST00000584054	SLC26A2	P50443	739 aa		11.22	□□□□□ -0.61
EIF4A1-231	ENST00000584054	PURA	Q00577	322 aa	Known RBP	11.22	□□□□□ -0.61
EIF4A1-231	ENST00000584054	STK38	Q15208	465 aa		11.22	□□□□□ -0.61
EIF4A1-231	ENST00000584054	DGKD	Q16760	1214 aa		11.22	□□□□□ -0.61
EIF4A1-231	ENST00000584054	SHC4	Q6S5L8	630 aa		11.22	□□□□□ -0.61
EIF4A1-231	ENST00000584054	CCDC60	Q8IWA6	550 aa	Predicted RBP	11.22	□□□□□ -0.61
EIF4A1-231	ENST00000584054	C4orf19	Q8IY42	314 aa		11.22	□□□□□ -0.61
EIF4A1-231	ENST00000584054	ARRDC4	Q8NCT1	418 aa		11.22	□□□□□ -0.61
EIF4A1-231	ENST00000584054	U2AF1L4	Q8WU68	220 aa	Known RBP	11.22	□□□□□ -0.61
EIF4A1-231	ENST00000584054	AP5M1	Q9H0R1	490 aa		11.22	□□□□□ -0.61
EIF4A1-231	ENST00000584054	CSRNP2	Q9H175	543 aa		11.22	□□□□□ -0.61
EIF4A1-231	ENST00000584054	TUFT1	Q9NNX1	390 aa		11.22	□□□□□ -0.61
EIF4A1-231	ENST00000584054	HPSE	Q9Y251	543 aa		11.22	□□□□□ -0.61
EIF4A1-231	ENST00000584054	SCN10A	Q9Y5Y9	1956 aa		11.21	□□□□□ -0.61
EIF4A1-231	ENST00000584054	TCHH	Q07283	1943 aa		11.21	□□□□□ -0.61
EIF4A1-231	ENST00000584054	GRIN2D	O15399	1336 aa		11.21	□□□□□ -0.61
EIF4A1-231	ENST00000584054	POTEM	A6NI47	508 aa		11.21	□□□□□ -0.61
EIF4A1-231	ENST00000584054	CABYR	O75952	493 aa		11.21	□□□□□ -0.61
EIF4A1-231	ENST00000584054	PGK1	P00558	417 aa		11.21	□□□□□ -0.61
EIF4A1-231	ENST00000584054	LGALS2	P05162	132 aa		11.21	□□□□□ -0.61
EIF4A1-231	ENST00000584054	PSAP	P07602	524 aa		11.21	□□□□□ -0.61
EIF4A1-231	ENST00000584054	CMA1	P23946	247 aa		11.21	□□□□□ -0.61
EIF4A1-231	ENST00000584054	MARCKS	P29966	332 aa	Predicted RBP	11.21	□□□□□ -0.61
EIF4A1-231	ENST00000584054	CNGA1	P29973	690 aa		11.21	□□□□□ -0.61
EIF4A1-231	ENST00000584054	TCF7	P36402	384 aa	Predicted RBP	11.21	□□□□□ -0.61
EIF4A1-231	ENST00000584054	ADAM17	P78536	824 aa		11.21	□□□□□ -0.61
EIF4A1-231	ENST00000584054	TARBP2	Q15633	366 aa	Known RBP	11.21	□□□□□ -0.61
EIF4A1-231	ENST00000584054	ECM1	Q16610	540 aa		11.21	□□□□□ -0.61
EIF4A1-231	ENST00000584054	TMEM119	Q4V9L6	283 aa		11.21	□□□□□ -0.61
EIF4A1-231	ENST00000584054	C1orf53	Q5VUE5	145 aa		11.21	□□□□□ -0.61
EIF4A1-231	ENST00000584054	RESP18	Q5W5W9	173 aa		11.21	□□□□□ -0.61
EIF4A1-231	ENST00000584054	MIS18BP1	Q6P0N0	1132 aa		11.21	□□□□□ -0.61
EIF4A1-231	ENST00000584054	USP49	Q70CQ1	688 aa		11.21	□□□□□ -0.61
EIF4A1-231	ENST00000584054	RNF180	Q86T96	592 aa		11.21	□□□□□ -0.61
EIF4A1-231	ENST00000584054	SESTD1	Q86VW0	696 aa		11.21	□□□□□ -0.61
EIF4A1-231	ENST00000584054	CATSPER3	Q86XQ3	398 aa		11.21	□□□□□ -0.61
EIF4A1-231	ENST00000584054	PCSK9	Q8NBP7	692 aa	Known RBP	11.21	□□□□□ -0.61
EIF4A1-231	ENST00000584054	CLIC6	Q96NY7	704 aa		11.21	□□□□□ -0.61
EIF4A1-231	ENST00000584054	DEFB118	Q96PH6	123 aa		11.21	□□□□□ -0.61
EIF4A1-231	ENST00000584054	PNMA5	Q96PV4	448 aa		11.21	□□□□□ -0.61
EIF4A1-231	ENST00000584054	EIF2AK1	Q9BQI3	630 aa	Known RBP	11.21	□□□□□ -0.61
EIF4A1-231	ENST00000584054	NIFK	Q9BYG3	293 aa	Known RBP	11.21	□□□□□ -0.61
EIF4A1-231	ENST00000584054	SEZ6L	Q9BYH1	1024 aa		11.21	□□□□□ -0.61
EIF4A1-231	ENST00000584054	RAB34	Q9BZG1	259 aa		11.21	□□□□□ -0.61
EIF4A1-231	ENST00000584054	SMARCAD1	Q9H4L7	1026 aa		11.21	□□□□□ -0.61
EIF4A1-231	ENST00000584054	WRAP73	Q9P2S5	460 aa	Predicted RBP	11.21	□□□□□ -0.61
EIF4A1-231	ENST00000584054	LRWD1	Q9UFC0	647 aa		11.21	□□□□□ -0.61
EIF4A1-231	ENST00000584054	VWA3A	A6NCI4	1184 aa		11.2	□□□□□ -0.62
EIF4A1-231	ENST00000584054	ZBTB42	B2RXF5	422 aa		11.2	□□□□□ -0.62
EIF4A1-231	ENST00000584054	MED24	O75448	989 aa		11.2	□□□□□ -0.62
EIF4A1-231	ENST00000584054	ASGR1	P07306	291 aa		11.2	□□□□□ -0.62
EIF4A1-231	ENST00000584054	PRR29	P0C7W0	189 aa		11.2	□□□□□ -0.62
EIF4A1-231	ENST00000584054	QARS	P47897	775 aa	Known RBP	11.2	□□□□□ -0.62
EIF4A1-231	ENST00000584054	CDK7	P50613	346 aa		11.2	□□□□□ -0.62
EIF4A1-231	ENST00000584054	STAT5B	P51692	787 aa		11.2	□□□□□ -0.62
EIF4A1-231	ENST00000584054	ACLY	P53396	1101 aa		11.2	□□□□□ -0.62
EIF4A1-231	ENST00000584054	PSMC5	P62195	406 aa		11.2	□□□□□ -0.62
EIF4A1-231	ENST00000584054	CEBPZ	Q03701	1054 aa	Known RBP	11.2	□□□□□ -0.62
EIF4A1-231	ENST00000584054	SNX17	Q15036	470 aa		11.2	□□□□□ -0.62
EIF4A1-231	ENST00000584054	KCNA10	Q16322	511 aa		11.2	□□□□□ -0.62
EIF4A1-231	ENST00000584054	UGCG	Q16739	394 aa		11.2	□□□□□ -0.62
EIF4A1-231	ENST00000584054	TMEM266	Q2M3C6	531 aa		11.2	□□□□□ -0.62
EIF4A1-231	ENST00000584054	GNAS	Q5JWF2	1037 aa		11.2	□□□□□ -0.62
EIF4A1-231	ENST00000584054	MIER3	Q7Z3K6	550 aa		11.2	□□□□□ -0.62
EIF4A1-231	ENST00000584054	LRRC15	Q8TF66	581 aa		11.2	□□□□□ -0.62
EIF4A1-231	ENST00000584054	SPATA32	Q96LK8	384 aa		11.2	□□□□□ -0.62
EIF4A1-231	ENST00000584054	UIMC1	Q96RL1	719 aa		11.2	□□□□□ -0.62
EIF4A1-231	ENST00000584054	SPC25	Q9HBM1	224 aa		11.2	□□□□□ -0.62
EIF4A1-231	ENST00000584054	PKD2L1	Q9P0L9	805 aa		11.2	□□□□□ -0.62
EIF4A1-231	ENST00000584054	DOCK5	Q9H7D0	1870 aa		11.2	□□□□□ -0.62
EIF4A1-231	ENST00000584054	PP2D1	A8MPX8	630 aa		11.19	□□□□□ -0.62
EIF4A1-231	ENST00000584054		H3BRB1	525 aa		11.19	□□□□□ -0.62
EIF4A1-231	ENST00000584054	ZEB2	O60315	1214 aa		11.19	□□□□□ -0.62
EIF4A1-231	ENST00000584054	C6orf222	P0C671	652 aa	Predicted RBP	11.19	□□□□□ -0.62
EIF4A1-231	ENST00000584054	BEX3	Q00994	111 aa		11.19	□□□□□ -0.62
EIF4A1-231	ENST00000584054	GRB10	Q13322	594 aa		11.19	□□□□□ -0.62
EIF4A1-231	ENST00000584054	E2F4	Q16254	413 aa		11.19	□□□□□ -0.62
EIF4A1-231	ENST00000584054	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	11.19	□□□□□ -0.62
EIF4A1-231	ENST00000584054	NAALADL2	Q58DX5	795 aa		11.19	□□□□□ -0.62
EIF4A1-231	ENST00000584054	BRDT	Q58F21	947 aa	Predicted RBP	11.19	□□□□□ -0.62
EIF4A1-231	ENST00000584054	SWSAP1	Q6NVH7	229 aa		11.19	□□□□□ -0.62
EIF4A1-231	ENST00000584054	FOXD4L3	Q6VB84	417 aa	Predicted RBP	11.19	□□□□□ -0.62
EIF4A1-231	ENST00000584054	ANO5	Q75V66	913 aa		11.19	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms