RNA–Protein interactions for RNA: ENST00000583948.5

NUP85-224, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,197 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-224ENST00000583948 S1PR5Q9H228 398 aa13.29□□□□□ -0.28
NUP85-224ENST00000583948 TUT1Q9H6E5 874 aaKnown RBP13.29□□□□□ -0.28
NUP85-224ENST00000583948 AGO3Q9H9G7 860 aaKnown RBP13.29□□□□□ -0.28
NUP85-224ENST00000583948 VAT1LQ9HCJ6 419 aa13.29□□□□□ -0.28
NUP85-224ENST00000583948 PXMP2Q9NR77 195 aa13.29□□□□□ -0.28
NUP85-224ENST00000583948 LOXHD1Q8IVV2 1947 aa13.29□□□□□ -0.28
NUP85-224ENST00000583948 C2CD4DB7Z1M9 353 aa13.28□□□□□ -0.28
NUP85-224ENST00000583948 OPLAHO14841 1288 aa13.28□□□□□ -0.28
NUP85-224ENST00000583948 SGSM2O43147 1006 aa13.28□□□□□ -0.28
NUP85-224ENST00000583948 PPFIA4O75335 1185 aa13.28□□□□□ -0.28
NUP85-224ENST00000583948 CFBP00751 764 aa13.28□□□□□ -0.28
NUP85-224ENST00000583948 LGALS2P05162 132 aa13.28□□□□□ -0.28
NUP85-224ENST00000583948 TOP1P11387 765 aaKnown RBP13.28□□□□□ -0.28
NUP85-224ENST00000583948 ARHGAP4P98171 946 aa13.28□□□□□ -0.28
NUP85-224ENST00000583948 CDC37Q16543 378 aaPredicted RBP13.28□□□□□ -0.28
NUP85-224ENST00000583948 UTP14CQ5TAP6 766 aaKnown RBP13.28□□□□□ -0.28
NUP85-224ENST00000583948 SYCE2Q6PIF2 218 aa13.28□□□□□ -0.28
NUP85-224ENST00000583948 FLCNQ8NFG4 579 aa13.28□□□□□ -0.28
NUP85-224ENST00000583948 ATP8B4Q8TF62 1192 aa13.28□□□□□ -0.28
NUP85-224ENST00000583948 FAM227BQ96M60 508 aa13.28□□□□□ -0.28
NUP85-224ENST00000583948 USP26Q9BXU7 913 aa13.28□□□□□ -0.28
NUP85-224ENST00000583948 IRF2BPLQ9H1B7 796 aa13.28□□□□□ -0.28
NUP85-224ENST00000583948 MYH6P13533 1939 aa13.28□□□□□ -0.28
NUP85-224ENST00000583948 CEP250Q9BV73 2442 aa13.28□□□□□ -0.28
NUP85-224ENST00000583948 A0A0D9SFI3 127 aa13.27□□□□□ -0.29
NUP85-224ENST00000583948 EIF3JO75822 258 aaKnown RBP13.27□□□□□ -0.29
NUP85-224ENST00000583948 SLC3A2P08195 630 aaKnown RBP13.27□□□□□ -0.29
NUP85-224ENST00000583948 HOXA13P31271 388 aaPredicted RBP13.27□□□□□ -0.29
NUP85-224ENST00000583948 TECP42680 631 aa13.27□□□□□ -0.29
NUP85-224ENST00000583948 SP4Q02446 784 aa13.27□□□□□ -0.29
NUP85-224ENST00000583948 CWF19L1Q69YN2 538 aaKnown RBP13.27□□□□□ -0.29
NUP85-224ENST00000583948 NACAP1Q9BZK3 213 aa13.27□□□□□ -0.29
NUP85-224ENST00000583948 IL25Q9H293 177 aa13.27□□□□□ -0.29
NUP85-224ENST00000583948 R4GN57 208 aa13.27□□□□□ -0.29
NUP85-224ENST00000583948 WDR19Q8NEZ3 1342 aa13.27□□□□□ -0.29
NUP85-224ENST00000583948 B4DLN1 442 aa13.26□□□□□ -0.29
NUP85-224ENST00000583948 CD52P31358 61 aa13.26□□□□□ -0.29
NUP85-224ENST00000583948 RBM25P49756 843 aaKnown RBP13.26□□□□□ -0.29
NUP85-224ENST00000583948 MRPL12P52815 198 aaKnown RBP13.26□□□□□ -0.29
NUP85-224ENST00000583948 HAND2P61296 217 aa13.26□□□□□ -0.29
NUP85-224ENST00000583948 MGAT3Q09327 533 aa13.26□□□□□ -0.29
NUP85-224ENST00000583948 QRICH1Q2TAL8 776 aa13.26□□□□□ -0.29
NUP85-224ENST00000583948 FAM26DQ5JW98 314 aa13.26□□□□□ -0.29
NUP85-224ENST00000583948 ASTLQ6HA08 431 aaPredicted RBP13.26□□□□□ -0.29
NUP85-224ENST00000583948 ADGRF4Q8IZF3 695 aa13.26□□□□□ -0.29
NUP85-224ENST00000583948 KCNG4Q8TDN1 519 aa13.26□□□□□ -0.29
NUP85-224ENST00000583948 LMBR1Q8WVP7 490 aa13.26□□□□□ -0.29
NUP85-224ENST00000583948 POMKQ9H5K3 350 aa13.26□□□□□ -0.29
NUP85-224ENST00000583948 EHMT1Q9H9B1 1298 aa13.26□□□□□ -0.29
NUP85-224ENST00000583948 CHD6Q8TD26 2715 aa13.25□□□□□ -0.29
NUP85-224ENST00000583948 ATF7P17544 494 aaPredicted RBP13.25□□□□□ -0.29
NUP85-224ENST00000583948 ADAM17P78536 824 aa13.25□□□□□ -0.29
NUP85-224ENST00000583948 TMEM62Q0P6H9 643 aa13.25□□□□□ -0.29
NUP85-224ENST00000583948 DUSP6Q16828 381 aa13.25□□□□□ -0.29
NUP85-224ENST00000583948 ZMYM1Q5SVZ6 1142 aa13.25□□□□□ -0.29
NUP85-224ENST00000583948 PLPP4Q5VZY2 271 aa13.25□□□□□ -0.29
NUP85-224ENST00000583948 CRIPAKQ8N1N5 446 aa13.25□□□□□ -0.29
NUP85-224ENST00000583948 RGS22Q8NE09 1264 aa13.25□□□□□ -0.29
NUP85-224ENST00000583948 DNAJB3Q8WWF6 145 aa13.25□□□□□ -0.29
NUP85-224ENST00000583948 APBB2Q92870 758 aa13.25□□□□□ -0.29
NUP85-224ENST00000583948 P2RX5Q93086 422 aa13.25□□□□□ -0.29
NUP85-224ENST00000583948 IPO9Q96P70 1041 aaKnown RBP13.25□□□□□ -0.29
NUP85-224ENST00000583948 IWS1Q96ST2 819 aa13.25□□□□□ -0.29
NUP85-224ENST00000583948 PDCD2LQ9BRP1 358 aa13.25□□□□□ -0.29
NUP85-224ENST00000583948 PLVAPQ9BX97 442 aa13.25□□□□□ -0.29
NUP85-224ENST00000583948 MLXIPQ9HAP2 919 aa13.25□□□□□ -0.29
NUP85-224ENST00000583948 RWDD3Q9Y3V2 267 aa13.25□□□□□ -0.29
NUP85-224ENST00000583948 MAP1BP46821 2468 aaKnown RBP13.25□□□□□ -0.29
NUP85-224ENST00000583948 ACACBO00763 2458 aa13.24□□□□□ -0.29
NUP85-224ENST00000583948 BAHCC1Q9P281 2608 aa13.24□□□□□ -0.29
NUP85-224ENST00000583948 HIDE1A8MVS5 230 aa13.24□□□□□ -0.29
NUP85-224ENST00000583948 PPP1R11O60927 126 aaPredicted RBP13.24□□□□□ -0.29
NUP85-224ENST00000583948 SNHG28P0DPA3 235 aa13.24□□□□□ -0.29
NUP85-224ENST00000583948 NPR3P17342 541 aa13.24□□□□□ -0.29
NUP85-224ENST00000583948 ANGPT1Q15389 498 aa13.24□□□□□ -0.29
NUP85-224ENST00000583948 ANKRD54Q6NXT1 300 aa13.24□□□□□ -0.29
NUP85-224ENST00000583948 CYFIP1Q7L576 1253 aa13.24□□□□□ -0.29
NUP85-224ENST00000583948 C12orf76Q8N812 135 aaPredicted RBP13.24□□□□□ -0.29
NUP85-224ENST00000583948 RIN2Q8WYP3 895 aaPredicted RBP13.24□□□□□ -0.29
NUP85-224ENST00000583948 NEK1Q96PY6 1258 aa13.24□□□□□ -0.29
NUP85-224ENST00000583948 LSG1Q9H089 658 aaKnown RBP13.24□□□□□ -0.29
NUP85-224ENST00000583948 LIMD1Q9UGP4 676 aa13.24□□□□□ -0.29
NUP85-224ENST00000583948 CDY2AQ9Y6F7 541 aa13.24□□□□□ -0.29
NUP85-224ENST00000583948 KAT6AQ92794 2004 aa13.23□□□□□ -0.29
NUP85-224ENST00000583948 ABCB11O95342 1321 aa13.23□□□□□ -0.29
NUP85-224ENST00000583948 ORC4O43929 436 aa13.23□□□□□ -0.29
NUP85-224ENST00000583948 ZFYP08048 801 aaPredicted RBP13.23□□□□□ -0.29
NUP85-224ENST00000583948 MARK3P27448 753 aa13.23□□□□□ -0.29
NUP85-224ENST00000583948 PBX3P40426 434 aa13.23□□□□□ -0.29
NUP85-224ENST00000583948 SEMA3FQ13275 785 aa13.23□□□□□ -0.29
NUP85-224ENST00000583948 MTMR3Q13615 1198 aa13.23□□□□□ -0.29
NUP85-224ENST00000583948 KCNC3Q14003 757 aa13.23□□□□□ -0.29
NUP85-224ENST00000583948 PGM5Q15124 567 aa13.23□□□□□ -0.29
NUP85-224ENST00000583948 TMEM266Q2M3C6 531 aa13.23□□□□□ -0.29
NUP85-224ENST00000583948 FBXO47Q5MNV8 452 aa13.23□□□□□ -0.29
NUP85-224ENST00000583948 PPP2R3CQ969Q6 453 aa13.23□□□□□ -0.29
NUP85-224ENST00000583948 MFSD1Q9H3U5 465 aa13.23□□□□□ -0.29
NUP85-224ENST00000583948 RTEL1Q9NZ71 1219 aa13.23□□□□□ -0.29
NUP85-224ENST00000583948 SORCS3Q9UPU3 1222 aa13.23□□□□□ -0.29
NUP85-224ENST00000583948 FNDC1Q4ZHG4 1894 aaPredicted RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms