RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 UBA7P41226 1012 aa10.46□□□□□ -0.73
UBBP4-201ENST00000583708 PKP1Q13835 747 aa10.46□□□□□ -0.73
UBBP4-201ENST00000583708 XKR3Q5GH77 459 aa10.46□□□□□ -0.73
UBBP4-201ENST00000583708 SLC43A3Q8NBI5 491 aa10.46□□□□□ -0.73
UBBP4-201ENST00000583708 BBXQ8WY36 941 aaPredicted RBP10.46□□□□□ -0.73
UBBP4-201ENST00000583708 GLG1Q92896 1179 aa10.46□□□□□ -0.73
UBBP4-201ENST00000583708 NACC1Q96RE7 527 aa10.46□□□□□ -0.73
UBBP4-201ENST00000583708 JPH2Q9BR39 696 aaPredicted RBP10.46□□□□□ -0.73
UBBP4-201ENST00000583708 C16orf70Q9BSU1 422 aa10.46□□□□□ -0.73
UBBP4-201ENST00000583708 NT5C3AQ9H0P0 336 aa10.46□□□□□ -0.73
UBBP4-201ENST00000583708 ZNF302Q9NR11 478 aa10.46□□□□□ -0.73
UBBP4-201ENST00000583708 CLIC4Q9Y696 253 aa10.46□□□□□ -0.73
UBBP4-201ENST00000583708 COL1A2P08123 1366 aa10.45□□□□□ -0.74
UBBP4-201ENST00000583708 NRCAMQ92823 1304 aa10.45□□□□□ -0.74
UBBP4-201ENST00000583708 KDM3AQ9Y4C1 1321 aa10.45□□□□□ -0.74
UBBP4-201ENST00000583708 A0A0U1RQG5 324 aaPredicted RBP10.45□□□□□ -0.74
UBBP4-201ENST00000583708 POTEFA5A3E0 1075 aa10.45□□□□□ -0.74
UBBP4-201ENST00000583708 WNT7AO00755 349 aa10.45□□□□□ -0.74
UBBP4-201ENST00000583708 MYL3P08590 195 aa10.45□□□□□ -0.74
UBBP4-201ENST00000583708 TECP42680 631 aa10.45□□□□□ -0.74
UBBP4-201ENST00000583708 PSEN2P49810 448 aa10.45□□□□□ -0.74
UBBP4-201ENST00000583708 CDC42EP1Q00587 391 aa10.45□□□□□ -0.74
UBBP4-201ENST00000583708 DNM1Q05193 864 aaKnown RBP10.45□□□□□ -0.74
UBBP4-201ENST00000583708 ZNF484Q5JVG2 852 aa10.45□□□□□ -0.74
UBBP4-201ENST00000583708 HYIQ5T013 277 aa10.45□□□□□ -0.74
UBBP4-201ENST00000583708 GJC2Q5T442 439 aaPredicted RBP10.45□□□□□ -0.74
UBBP4-201ENST00000583708 ADALQ6DHV7 355 aa10.45□□□□□ -0.74
UBBP4-201ENST00000583708 SWSAP1Q6NVH7 229 aa10.45□□□□□ -0.74
UBBP4-201ENST00000583708 PDXDC2PQ6P474 469 aa10.45□□□□□ -0.74
UBBP4-201ENST00000583708 UBE2Q1Q7Z7E8 422 aa10.45□□□□□ -0.74
UBBP4-201ENST00000583708 ATP8B4Q8TF62 1192 aa10.45□□□□□ -0.74
UBBP4-201ENST00000583708 SPATA32Q96LK8 384 aa10.45□□□□□ -0.74
UBBP4-201ENST00000583708 TOX2Q96NM4 488 aa10.45□□□□□ -0.74
UBBP4-201ENST00000583708 EIF2AK1Q9BQI3 630 aaKnown RBP10.45□□□□□ -0.74
UBBP4-201ENST00000583708 NIFKQ9BYG3 293 aaKnown RBP10.45□□□□□ -0.74
UBBP4-201ENST00000583708 CCSER1Q9C0I3 900 aa10.45□□□□□ -0.74
UBBP4-201ENST00000583708 C11orf49Q9H6J7 331 aa10.45□□□□□ -0.74
UBBP4-201ENST00000583708 STARD7Q9NQZ5 370 aa10.45□□□□□ -0.74
UBBP4-201ENST00000583708 ANKEF1Q9NU02 776 aa10.45□□□□□ -0.74
UBBP4-201ENST00000583708 PKD2L1Q9P0L9 805 aa10.45□□□□□ -0.74
UBBP4-201ENST00000583708 TFIP11Q9UBB9 837 aaKnown RBP10.45□□□□□ -0.74
UBBP4-201ENST00000583708 IGSF9BQ9UPX0 1349 aa10.44□□□□□ -0.74
UBBP4-201ENST00000583708 A0A1W2PQ45 241 aaPredicted RBP10.44□□□□□ -0.74
UBBP4-201ENST00000583708 A0A1W2PQY0 241 aa10.44□□□□□ -0.74
UBBP4-201ENST00000583708 ARVCFO00192 962 aa10.44□□□□□ -0.74
UBBP4-201ENST00000583708 MAGEB2O15479 319 aa10.44□□□□□ -0.74
UBBP4-201ENST00000583708 GAS2O43903 313 aaKnown RBP10.44□□□□□ -0.74
UBBP4-201ENST00000583708 SLITRK3O94933 977 aa10.44□□□□□ -0.74
UBBP4-201ENST00000583708 CDK7P50613 346 aa10.44□□□□□ -0.74
UBBP4-201ENST00000583708 BEX3Q00994 111 aa10.44□□□□□ -0.74
UBBP4-201ENST00000583708 NBR1Q14596 966 aa10.44□□□□□ -0.74
UBBP4-201ENST00000583708 MFSD10Q14728 455 aa10.44□□□□□ -0.74
UBBP4-201ENST00000583708 SNX17Q15036 470 aa10.44□□□□□ -0.74
UBBP4-201ENST00000583708 TMEM63BQ5T3F8 832 aa10.44□□□□□ -0.74
UBBP4-201ENST00000583708 NCAPH2Q6IBW4 605 aa10.44□□□□□ -0.74
UBBP4-201ENST00000583708 FAM173BQ6P4H8 233 aa10.44□□□□□ -0.74
UBBP4-201ENST00000583708 C7orf31Q8N865 590 aa10.44□□□□□ -0.74
UBBP4-201ENST00000583708 LEO1Q8WVC0 666 aaPredicted RBP10.44□□□□□ -0.74
UBBP4-201ENST00000583708 KAT2BQ92831 832 aa10.44□□□□□ -0.74
UBBP4-201ENST00000583708 VTI1AQ96AJ9 217 aa10.44□□□□□ -0.74
UBBP4-201ENST00000583708 CALML4Q96GE6 196 aa10.44□□□□□ -0.74
UBBP4-201ENST00000583708 HTATIP2Q9BUP3 242 aa10.44□□□□□ -0.74
UBBP4-201ENST00000583708 CCDC39Q9UFE4 941 aa10.44□□□□□ -0.74
UBBP4-201ENST00000583708 KCNG1Q9UIX4 513 aa10.44□□□□□ -0.74
UBBP4-201ENST00000583708 FBXO2Q9UK22 296 aaPredicted RBP10.44□□□□□ -0.74
UBBP4-201ENST00000583708 A0A1W2PQ27 194 aa10.43□□□□□ -0.74
UBBP4-201ENST00000583708 A0A1W2PQ64 194 aa10.43□□□□□ -0.74
UBBP4-201ENST00000583708 A0A1W2PQD8 194 aa10.43□□□□□ -0.74
UBBP4-201ENST00000583708 POTEB3A0JP26 581 aa10.43□□□□□ -0.74
UBBP4-201ENST00000583708 VWA3AA6NCI4 1184 aa10.43□□□□□ -0.74
UBBP4-201ENST00000583708 DDX39AO00148 427 aaKnown RBP10.43□□□□□ -0.74
UBBP4-201ENST00000583708 EML1O00423 815 aa10.43□□□□□ -0.74
UBBP4-201ENST00000583708 TLR3O15455 904 aaKnown RBP10.43□□□□□ -0.74
UBBP4-201ENST00000583708 CMA1P23946 247 aa10.43□□□□□ -0.74
UBBP4-201ENST00000583708 HOXC8P31273 242 aa10.43□□□□□ -0.74
UBBP4-201ENST00000583708 ME1P48163 572 aa10.43□□□□□ -0.74
UBBP4-201ENST00000583708 MNX1P50219 401 aaPredicted RBP10.43□□□□□ -0.74
UBBP4-201ENST00000583708 ITGA7Q13683 1181 aa10.43□□□□□ -0.74
UBBP4-201ENST00000583708 KIAA0753Q2KHM9 967 aa10.43□□□□□ -0.74
UBBP4-201ENST00000583708 UTP14CQ5TAP6 766 aaKnown RBP10.43□□□□□ -0.74
UBBP4-201ENST00000583708 FOXD4L5Q5VV16 416 aaPredicted RBP10.43□□□□□ -0.74
UBBP4-201ENST00000583708 POTEBQ6S5H4 581 aa10.43□□□□□ -0.74
UBBP4-201ENST00000583708 CXCL17Q6UXB2 119 aa10.43□□□□□ -0.74
UBBP4-201ENST00000583708 SLC39A5Q6ZMH5 540 aa10.43□□□□□ -0.74
UBBP4-201ENST00000583708 CCDC73Q6ZRK6 1079 aa10.43□□□□□ -0.74
UBBP4-201ENST00000583708 ANKRD33Q7Z3H0 272 aa10.43□□□□□ -0.74
UBBP4-201ENST00000583708 CCDC60Q8IWA6 550 aaPredicted RBP10.43□□□□□ -0.74
UBBP4-201ENST00000583708 FOXD4L4Q8WXT5 416 aaPredicted RBP10.43□□□□□ -0.74
UBBP4-201ENST00000583708 LENG1Q96BZ8 264 aaPredicted RBP10.43□□□□□ -0.74
UBBP4-201ENST00000583708 CCDC34Q96HJ3 373 aa10.43□□□□□ -0.74
UBBP4-201ENST00000583708 GBP4Q96PP9 640 aa10.43□□□□□ -0.74
UBBP4-201ENST00000583708 PCYT2Q99447 389 aa10.43□□□□□ -0.74
UBBP4-201ENST00000583708 LRRC27Q9C0I9 530 aa10.43□□□□□ -0.74
UBBP4-201ENST00000583708 CUEDC2Q9H467 287 aa10.43□□□□□ -0.74
UBBP4-201ENST00000583708 BCAS3Q9H6U6 928 aa10.43□□□□□ -0.74
UBBP4-201ENST00000583708 FAM13BQ9NYF5 915 aa10.43□□□□□ -0.74
UBBP4-201ENST00000583708 KCND2Q9NZV8 630 aa10.43□□□□□ -0.74
UBBP4-201ENST00000583708 GABBR1Q9UBS5 961 aa10.43□□□□□ -0.74
UBBP4-201ENST00000583708 USP25Q9UHP3 1055 aa10.43□□□□□ -0.74
UBBP4-201ENST00000583708 DBR1Q9UK59 544 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms