RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 SH2D4AQ9H788 454 aa9.39□□□□□ -0.91
PPP4R1-225ENST00000583438 IL17RBQ9NRM6 502 aa9.39□□□□□ -0.91
PPP4R1-225ENST00000583438 NDFIP2Q9NV92 336 aa9.39□□□□□ -0.91
PPP4R1-225ENST00000583438 SLC5A4Q9NY91 659 aa9.39□□□□□ -0.91
PPP4R1-225ENST00000583438 MTMR4Q9NYA4 1195 aa9.39□□□□□ -0.91
PPP4R1-225ENST00000583438 FAM184BQ9ULE4 1060 aa9.39□□□□□ -0.91
PPP4R1-225ENST00000583438 CNPY2Q9Y2B0 182 aa9.39□□□□□ -0.91
PPP4R1-225ENST00000583438 USP20Q9Y2K6 914 aa9.39□□□□□ -0.91
PPP4R1-225ENST00000583438 PCDHGC4Q9Y5F7 938 aa9.39□□□□□ -0.91
PPP4R1-225ENST00000583438 ELP1O95163 1332 aa9.38□□□□□ -0.91
PPP4R1-225ENST00000583438 MICAL3Q7RTP6 2002 aa9.38□□□□□ -0.91
PPP4R1-225ENST00000583438 DCDC2BA2VCK2 349 aa9.38□□□□□ -0.91
PPP4R1-225ENST00000583438 DCDC2CA8MYV0 355 aa9.38□□□□□ -0.91
PPP4R1-225ENST00000583438 RFXAPO00287 272 aa9.38□□□□□ -0.91
PPP4R1-225ENST00000583438 FZD6O60353 706 aa9.38□□□□□ -0.91
PPP4R1-225ENST00000583438 RAB11FIP3O75154 756 aa9.38□□□□□ -0.91
PPP4R1-225ENST00000583438 CCL23P55773 120 aa9.38□□□□□ -0.91
PPP4R1-225ENST00000583438 TFF2Q03403 129 aa9.38□□□□□ -0.91
PPP4R1-225ENST00000583438 TNP2Q05952 138 aa9.38□□□□□ -0.91
PPP4R1-225ENST00000583438 CCDC85BQ15834 202 aaPredicted RBP9.38□□□□□ -0.91
PPP4R1-225ENST00000583438 HSP90AB4PQ58FF6 505 aa9.38□□□□□ -0.91
PPP4R1-225ENST00000583438 ALKBH2Q6NS38 261 aa9.38□□□□□ -0.91
PPP4R1-225ENST00000583438 SV2AQ7L0J3 742 aa9.38□□□□□ -0.91
PPP4R1-225ENST00000583438 MSL3Q8N5Y2 521 aaKnown RBP9.38□□□□□ -0.91
PPP4R1-225ENST00000583438 PRPF38AQ8NAV1 312 aaKnown RBP9.38□□□□□ -0.91
PPP4R1-225ENST00000583438 PI4K2BQ8TCG2 481 aa9.38□□□□□ -0.91
PPP4R1-225ENST00000583438 HERVK_113Q902F9 699 aa9.38□□□□□ -0.91
PPP4R1-225ENST00000583438 SCLYQ96I15 445 aa9.38□□□□□ -0.91
PPP4R1-225ENST00000583438 CTAGE1Q96RT6 745 aa9.38□□□□□ -0.91
PPP4R1-225ENST00000583438 NOC4LQ9BVI4 516 aaKnown RBP9.38□□□□□ -0.91
PPP4R1-225ENST00000583438 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.38□□□□□ -0.91
PPP4R1-225ENST00000583438 NLRC5Q86WI3 1866 aa9.38□□□□□ -0.91
PPP4R1-225ENST00000583438 SALL3Q9BXA9 1300 aa9.37□□□□□ -0.91
PPP4R1-225ENST00000583438 A0A0U1RQG5 324 aaPredicted RBP9.37□□□□□ -0.91
PPP4R1-225ENST00000583438 H3BM21 787 aa9.37□□□□□ -0.91
PPP4R1-225ENST00000583438 KHNYNO15037 678 aaKnown RBP9.37□□□□□ -0.91
PPP4R1-225ENST00000583438 EFSO43281 561 aa9.37□□□□□ -0.91
PPP4R1-225ENST00000583438 FAM157BP0CG42 384 aa9.37□□□□□ -0.91
PPP4R1-225ENST00000583438 ARSDP51689 593 aa9.37□□□□□ -0.91
PPP4R1-225ENST00000583438 AAMPQ13685 434 aa9.37□□□□□ -0.91
PPP4R1-225ENST00000583438 TCTN1Q2MV58 587 aa9.37□□□□□ -0.91
PPP4R1-225ENST00000583438 VPS53Q5VIR6 699 aa9.37□□□□□ -0.91
PPP4R1-225ENST00000583438 TTBK2Q6IQ55 1244 aa9.37□□□□□ -0.91
PPP4R1-225ENST00000583438 EEPD1Q7L9B9 569 aa9.37□□□□□ -0.91
PPP4R1-225ENST00000583438 OTOP2Q7RTS6 562 aa9.37□□□□□ -0.91
PPP4R1-225ENST00000583438 IFNL3Q8IZI9 196 aa9.37□□□□□ -0.91
PPP4R1-225ENST00000583438 GMCL1P1Q8NEA9 526 aa9.37□□□□□ -0.91
PPP4R1-225ENST00000583438 APPBP2Q92624 585 aa9.37□□□□□ -0.91
PPP4R1-225ENST00000583438 DDX11Q96FC9 970 aa9.37□□□□□ -0.91
PPP4R1-225ENST00000583438 ABHD17AQ96GS6 310 aa9.37□□□□□ -0.91
PPP4R1-225ENST00000583438 GLT1D1Q96MS3 346 aa9.37□□□□□ -0.91
PPP4R1-225ENST00000583438 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.37□□□□□ -0.91
PPP4R1-225ENST00000583438 ABHD16BQ9H3Z7 469 aa9.37□□□□□ -0.91
PPP4R1-225ENST00000583438 BRD7Q9NPI1 651 aa9.37□□□□□ -0.91
PPP4R1-225ENST00000583438 RNF146Q9NTX7 359 aa9.37□□□□□ -0.91
PPP4R1-225ENST00000583438 TMEM232C9JQI7 657 aa9.36□□□□□ -0.91
PPP4R1-225ENST00000583438 RNF113AO15541 343 aaKnown RBP9.36□□□□□ -0.91
PPP4R1-225ENST00000583438 MAPTP10636 758 aaKnown RBP9.36□□□□□ -0.91
PPP4R1-225ENST00000583438 KCNQ1P51787 676 aa9.36□□□□□ -0.91
PPP4R1-225ENST00000583438 SFSWAPQ12872 951 aaKnown RBP9.36□□□□□ -0.91
PPP4R1-225ENST00000583438 PPIGQ13427 754 aaKnown RBP eCLIP9.36□□□□□ -0.91
PPP4R1-225ENST00000583438 TTLL4Q14679 1199 aa9.36□□□□□ -0.91
PPP4R1-225ENST00000583438 GPNMBQ14956 572 aa9.36□□□□□ -0.91
PPP4R1-225ENST00000583438 TMCO4Q5TGY1 634 aa9.36□□□□□ -0.91
PPP4R1-225ENST00000583438 SLFN13Q68D06 897 aa9.36□□□□□ -0.91
PPP4R1-225ENST00000583438 KCTD1Q719H9 257 aa9.36□□□□□ -0.91
PPP4R1-225ENST00000583438 TLK2Q86UE8 772 aa9.36□□□□□ -0.91
PPP4R1-225ENST00000583438 GPR161Q8N6U8 529 aaKnown RBP9.36□□□□□ -0.91
PPP4R1-225ENST00000583438 NEDD1Q8NHV4 660 aa9.36□□□□□ -0.91
PPP4R1-225ENST00000583438 GPR152Q8TDT2 470 aa9.36□□□□□ -0.91
PPP4R1-225ENST00000583438 NUP133Q8WUM0 1156 aa9.36□□□□□ -0.91
PPP4R1-225ENST00000583438 EDEM1Q92611 657 aa9.36□□□□□ -0.91
PPP4R1-225ENST00000583438 ASB2Q96Q27 587 aa9.36□□□□□ -0.91
PPP4R1-225ENST00000583438 LRRCC1Q9C099 1032 aa9.36□□□□□ -0.91
PPP4R1-225ENST00000583438 IL23AQ9NPF7 189 aa9.36□□□□□ -0.91
PPP4R1-225ENST00000583438 ECHDC1Q9NTX5 307 aa9.36□□□□□ -0.91
PPP4R1-225ENST00000583438 TRMT13Q9NUP7 481 aaKnown RBP9.36□□□□□ -0.91
PPP4R1-225ENST00000583438 DDX19BQ9UMR2 479 aa9.36□□□□□ -0.91
PPP4R1-225ENST00000583438 C5orf42Q9H799 3197 aa9.35□□□□□ -0.91
PPP4R1-225ENST00000583438 NFIBO00712 420 aa9.35□□□□□ -0.91
PPP4R1-225ENST00000583438 TERTO14746 1132 aaKnown RBP9.35□□□□□ -0.91
PPP4R1-225ENST00000583438 CYP2C9P11712 490 aa9.35□□□□□ -0.91
PPP4R1-225ENST00000583438 BMP3P12645 472 aa9.35□□□□□ -0.91
PPP4R1-225ENST00000583438 MCCP23508 829 aa9.35□□□□□ -0.91
PPP4R1-225ENST00000583438 COPB2P35606 906 aa9.35□□□□□ -0.91
PPP4R1-225ENST00000583438 NOVP48745 357 aa9.35□□□□□ -0.91
PPP4R1-225ENST00000583438 TNFAIP2Q03169 654 aa9.35□□□□□ -0.91
PPP4R1-225ENST00000583438 DNM1Q05193 864 aaKnown RBP9.35□□□□□ -0.91
PPP4R1-225ENST00000583438 AKNAD1Q5T1N1 836 aa9.35□□□□□ -0.91
PPP4R1-225ENST00000583438 GIMAP6Q6P9H5 292 aa9.35□□□□□ -0.91
PPP4R1-225ENST00000583438 CCDC174Q6PII3 467 aa9.35□□□□□ -0.91
PPP4R1-225ENST00000583438 SLC30A10Q6XR72 485 aa9.35□□□□□ -0.91
PPP4R1-225ENST00000583438 TMCO2Q7Z6W1 182 aaPredicted RBP9.35□□□□□ -0.91
PPP4R1-225ENST00000583438 NPAS3Q8IXF0 933 aa9.35□□□□□ -0.91
PPP4R1-225ENST00000583438 RGL4Q8IZJ4 473 aa9.35□□□□□ -0.91
PPP4R1-225ENST00000583438 ANKRD35Q8N283 1001 aa9.35□□□□□ -0.91
PPP4R1-225ENST00000583438 CHST13Q8NET6 341 aa9.35□□□□□ -0.91
PPP4R1-225ENST00000583438 MORC4Q8TE76 937 aa9.35□□□□□ -0.91
PPP4R1-225ENST00000583438 HIPK3Q9H422 1215 aa9.35□□□□□ -0.91
PPP4R1-225ENST00000583438 MKNK2Q9HBH9 465 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms