RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 POLR2DO15514 142 aaKnown RBP18.34■□□□□ 0.53
CDK5RAP3-228ENST00000583363 ADCY6O43306 1168 aa18.34■□□□□ 0.53
CDK5RAP3-228ENST00000583363 MED24O75448 989 aa18.34■□□□□ 0.53
CDK5RAP3-228ENST00000583363 NR1I2O75469 434 aa18.34■□□□□ 0.53
CDK5RAP3-228ENST00000583363 ZNF202O95125 648 aa18.34■□□□□ 0.53
CDK5RAP3-228ENST00000583363 CCT6AP40227 531 aaKnown RBP18.34■□□□□ 0.53
CDK5RAP3-228ENST00000583363 GRB10Q13322 594 aa18.34■□□□□ 0.53
CDK5RAP3-228ENST00000583363 KARSQ15046 597 aaKnown RBP18.34■□□□□ 0.53
CDK5RAP3-228ENST00000583363 ECM1Q16610 540 aa18.34■□□□□ 0.53
CDK5RAP3-228ENST00000583363 SKOR2Q2VWA4 1001 aaPredicted RBP18.34■□□□□ 0.53
CDK5RAP3-228ENST00000583363 GJC2Q5T442 439 aaPredicted RBP18.34■□□□□ 0.53
CDK5RAP3-228ENST00000583363 MAP3K21Q5TCX8 1036 aa18.34■□□□□ 0.53
CDK5RAP3-228ENST00000583363 HAUS3Q68CZ6 603 aa18.34■□□□□ 0.53
CDK5RAP3-228ENST00000583363 CATSPER3Q86XQ3 398 aa18.34■□□□□ 0.53
CDK5RAP3-228ENST00000583363 SEPT1Q8WYJ6 367 aa18.34■□□□□ 0.53
CDK5RAP3-228ENST00000583363 CALML4Q96GE6 196 aa18.34■□□□□ 0.53
CDK5RAP3-228ENST00000583363 DYDC2Q96IM9 177 aa18.34■□□□□ 0.53
CDK5RAP3-228ENST00000583363 DEFB118Q96PH6 123 aa18.34■□□□□ 0.53
CDK5RAP3-228ENST00000583363 TUFT1Q9NNX1 390 aa18.34■□□□□ 0.53
CDK5RAP3-228ENST00000583363 RGL1Q9NZL6 768 aa18.34■□□□□ 0.53
CDK5RAP3-228ENST00000583363 Q9Y3F1 56 aa18.34■□□□□ 0.53
CDK5RAP3-228ENST00000583363 SAMM50Q9Y512 469 aa18.34■□□□□ 0.53
CDK5RAP3-228ENST00000583363 P4HBP07237 508 aaKnown RBP18.33■□□□□ 0.52
CDK5RAP3-228ENST00000583363 PSAPP07602 524 aa18.33■□□□□ 0.52
CDK5RAP3-228ENST00000583363 PRKAR2AP13861 404 aaKnown RBP18.33■□□□□ 0.52
CDK5RAP3-228ENST00000583363 AKR1A1P14550 325 aa18.33■□□□□ 0.52
CDK5RAP3-228ENST00000583363 PTGS1P23219 599 aa18.33■□□□□ 0.52
CDK5RAP3-228ENST00000583363 SP4Q02446 784 aa18.33■□□□□ 0.52
CDK5RAP3-228ENST00000583363 RRAGBQ5VZM2 374 aa18.33■□□□□ 0.52
CDK5RAP3-228ENST00000583363 MIS18BP1Q6P0N0 1132 aa18.33■□□□□ 0.52
CDK5RAP3-228ENST00000583363 PDILTQ8N807 584 aa18.33■□□□□ 0.52
CDK5RAP3-228ENST00000583363 NEK9Q8TD19 979 aa18.33■□□□□ 0.52
CDK5RAP3-228ENST00000583363 SPATA33Q96N06 139 aa18.33■□□□□ 0.52
CDK5RAP3-228ENST00000583363 GPR20Q99678 358 aa18.33■□□□□ 0.52
CDK5RAP3-228ENST00000583363 PYM1Q9BRP8 204 aaKnown RBP18.33■□□□□ 0.52
CDK5RAP3-228ENST00000583363 PAK6Q9NQU5 681 aaPredicted RBP18.33■□□□□ 0.52
CDK5RAP3-228ENST00000583363 IGKV6D-21A0A0A0MT36 114 aa18.32■□□□□ 0.52
CDK5RAP3-228ENST00000583363 SEPT4O43236 478 aa18.32■□□□□ 0.52
CDK5RAP3-228ENST00000583363 DYNC1LI2O43237 492 aaPredicted RBP18.32■□□□□ 0.52
CDK5RAP3-228ENST00000583363 TRAK2O60296 914 aa18.32■□□□□ 0.52
CDK5RAP3-228ENST00000583363 TFRCP02786 760 aaKnown RBP18.32■□□□□ 0.52
CDK5RAP3-228ENST00000583363 SUPT20HL2P0C7V6 817 aa18.32■□□□□ 0.52
CDK5RAP3-228ENST00000583363 MUTP22033 750 aa18.32■□□□□ 0.52
CDK5RAP3-228ENST00000583363 CTTNQ14247 550 aaKnown RBP18.32■□□□□ 0.52
CDK5RAP3-228ENST00000583363 ZRSR1Q15695 479 aaKnown RBP18.32■□□□□ 0.52
CDK5RAP3-228ENST00000583363 E2F4Q16254 413 aa18.32■□□□□ 0.52
CDK5RAP3-228ENST00000583363 HSDL1Q3SXM5 330 aa18.32■□□□□ 0.52
CDK5RAP3-228ENST00000583363 LONRF3Q496Y0 759 aa18.32■□□□□ 0.52
CDK5RAP3-228ENST00000583363 TMEM119Q4V9L6 283 aa18.32■□□□□ 0.52
CDK5RAP3-228ENST00000583363 IQUBQ8NA54 791 aa18.32■□□□□ 0.52
CDK5RAP3-228ENST00000583363 PLIN2Q99541 437 aa18.32■□□□□ 0.52
CDK5RAP3-228ENST00000583363 CRISPLD2Q9H0B8 497 aa18.32■□□□□ 0.52
CDK5RAP3-228ENST00000583363 DACT1Q9NYF0 836 aa18.32■□□□□ 0.52
CDK5RAP3-228ENST00000583363 DOCK5Q9H7D0 1870 aa18.31■□□□□ 0.52
CDK5RAP3-228ENST00000583363 KDM3AQ9Y4C1 1321 aa18.31■□□□□ 0.52
CDK5RAP3-228ENST00000583363 LAMA3Q16787 3333 aa18.31■□□□□ 0.52
CDK5RAP3-228ENST00000583363 EVI5O60447 810 aa18.31■□□□□ 0.52
CDK5RAP3-228ENST00000583363 DUSP11O75319 330 aaKnown RBP18.31■□□□□ 0.52
CDK5RAP3-228ENST00000583363 PLCG1P19174 1290 aa18.31■□□□□ 0.52
CDK5RAP3-228ENST00000583363 CCND3P30281 292 aaPredicted RBP18.31■□□□□ 0.52
CDK5RAP3-228ENST00000583363 QARSP47897 775 aaKnown RBP18.31■□□□□ 0.52
CDK5RAP3-228ENST00000583363 CYP4A11Q02928 519 aa18.31■□□□□ 0.52
CDK5RAP3-228ENST00000583363 KLHL40Q2TBA0 621 aa18.31■□□□□ 0.52
CDK5RAP3-228ENST00000583363 NAALADL2Q58DX5 795 aa18.31■□□□□ 0.52
CDK5RAP3-228ENST00000583363 SWSAP1Q6NVH7 229 aa18.31■□□□□ 0.52
CDK5RAP3-228ENST00000583363 TPH2Q8IWU9 490 aa18.31■□□□□ 0.52
CDK5RAP3-228ENST00000583363 KCTD17Q8N5Z5 321 aa18.31■□□□□ 0.52
CDK5RAP3-228ENST00000583363 OR6J1Q8NGC5 347 aa18.31■□□□□ 0.52
CDK5RAP3-228ENST00000583363 PPTC7Q8NI37 304 aa18.31■□□□□ 0.52
CDK5RAP3-228ENST00000583363 LRRC15Q8TF66 581 aa18.31■□□□□ 0.52
CDK5RAP3-228ENST00000583363 DHX58Q96C10 678 aa18.31■□□□□ 0.52
CDK5RAP3-228ENST00000583363 CDK5RAP3Q96JB5 506 aa18.31■□□□□ 0.52
CDK5RAP3-228ENST00000583363 TIGD1Q96MW7 591 aa18.31■□□□□ 0.52
CDK5RAP3-228ENST00000583363 NT5C3AQ9H0P0 336 aa18.31■□□□□ 0.52
CDK5RAP3-228ENST00000583363 USP25Q9UHP3 1055 aa18.31■□□□□ 0.52
CDK5RAP3-228ENST00000583363 KIAA1024Q9UPX6 916 aa18.31■□□□□ 0.52
CDK5RAP3-228ENST00000583363 POTEB3A0JP26 581 aa18.3■□□□□ 0.52
CDK5RAP3-228ENST00000583363 NOP56O00567 594 aaKnown RBP18.3■□□□□ 0.52
CDK5RAP3-228ENST00000583363 LGR5O75473 907 aa18.3■□□□□ 0.52
CDK5RAP3-228ENST00000583363 CNGA1P29973 690 aa18.3■□□□□ 0.52
CDK5RAP3-228ENST00000583363 PSMC5P62195 406 aa18.3■□□□□ 0.52
CDK5RAP3-228ENST00000583363 POTEBQ6S5H4 581 aa18.3■□□□□ 0.52
CDK5RAP3-228ENST00000583363 BANK1Q8NDB2 785 aa18.3■□□□□ 0.52
CDK5RAP3-228ENST00000583363 RASSF8Q8NHQ8 419 aa18.3■□□□□ 0.52
CDK5RAP3-228ENST00000583363 AFG1LQ8WV93 481 aa18.3■□□□□ 0.52
CDK5RAP3-228ENST00000583363 PCYT2Q99447 389 aa18.3■□□□□ 0.52
CDK5RAP3-228ENST00000583363 ZSWIM4Q9H7M6 989 aa18.3■□□□□ 0.52
CDK5RAP3-228ENST00000583363 DDX19AQ9NUU7 478 aaKnown RBP18.3■□□□□ 0.52
CDK5RAP3-228ENST00000583363 GABBR1Q9UBS5 961 aa18.3■□□□□ 0.52
CDK5RAP3-228ENST00000583363 SERTAD1Q9UHV2 236 aa18.3■□□□□ 0.52
CDK5RAP3-228ENST00000583363 ACTN4O43707 911 aaKnown RBP18.29■□□□□ 0.52
CDK5RAP3-228ENST00000583363 PPFIA4O75335 1185 aa18.29■□□□□ 0.52
CDK5RAP3-228ENST00000583363 LYPLA2O95372 231 aa18.29■□□□□ 0.52
CDK5RAP3-228ENST00000583363 SLFN14P0C7P3 912 aa18.29■□□□□ 0.52
CDK5RAP3-228ENST00000583363 TCF7P36402 384 aaPredicted RBP18.29■□□□□ 0.52
CDK5RAP3-228ENST00000583363 STAT6P42226 847 aa18.29■□□□□ 0.52
CDK5RAP3-228ENST00000583363 KRBA2Q6ZNG9 492 aa18.29■□□□□ 0.52
CDK5RAP3-228ENST00000583363 KCNK18Q7Z418 384 aa18.29■□□□□ 0.52
CDK5RAP3-228ENST00000583363 CCDC60Q8IWA6 550 aaPredicted RBP18.29■□□□□ 0.52
CDK5RAP3-228ENST00000583363 C4orf19Q8IY42 314 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms