RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 MTDHQ86UE4 582 aaKnown RBP6.45□□□□□ -1.38
SMCHD1-208ENST00000583344 REXO1L1PQ8IX06 675 aa6.45□□□□□ -1.38
SMCHD1-208ENST00000583344 IFNL2Q8IZJ0 200 aa6.45□□□□□ -1.38
SMCHD1-208ENST00000583344 LMF1Q96S06 567 aa6.45□□□□□ -1.38
SMCHD1-208ENST00000583344 ZNF747Q9BV97 191 aa6.45□□□□□ -1.38
SMCHD1-208ENST00000583344 IGSF5Q9NSI5 407 aa6.45□□□□□ -1.38
SMCHD1-208ENST00000583344 RIC8BQ9NVN3 520 aa6.45□□□□□ -1.38
SMCHD1-208ENST00000583344 SRPK3Q9UPE1 567 aa6.45□□□□□ -1.38
SMCHD1-208ENST00000583344 PDPK1O15530 556 aa6.44□□□□□ -1.38
SMCHD1-208ENST00000583344 FOXS1O43638 330 aa6.44□□□□□ -1.38
SMCHD1-208ENST00000583344 STK10O94804 968 aaKnown RBP6.44□□□□□ -1.38
SMCHD1-208ENST00000583344 PTPN1P18031 435 aaKnown RBP6.44□□□□□ -1.38
SMCHD1-208ENST00000583344 PAK1Q13153 545 aa6.44□□□□□ -1.38
SMCHD1-208ENST00000583344 FAM209AQ5JX71 171 aa6.44□□□□□ -1.38
SMCHD1-208ENST00000583344 ARHGAP36Q6ZRI8 547 aa6.44□□□□□ -1.38
SMCHD1-208ENST00000583344 DPH6Q7L8W6 267 aa6.44□□□□□ -1.38
SMCHD1-208ENST00000583344 PTRH1Q86Y79 214 aaKnown RBP6.44□□□□□ -1.38
SMCHD1-208ENST00000583344 CKAP2LQ8IYA6 745 aa6.44□□□□□ -1.38
SMCHD1-208ENST00000583344 ZNF669Q96BR6 464 aaPredicted RBP6.44□□□□□ -1.38
SMCHD1-208ENST00000583344 CDC6Q99741 560 aa6.44□□□□□ -1.38
SMCHD1-208ENST00000583344 VPS11Q9H270 941 aa6.44□□□□□ -1.38
SMCHD1-208ENST00000583344 SEC61A2Q9H9S3 476 aa6.44□□□□□ -1.38
SMCHD1-208ENST00000583344 PCDHA8Q9Y5H6 950 aa6.44□□□□□ -1.38
SMCHD1-208ENST00000583344 TRBV23-1A0A0A0MS06 115 aa6.43□□□□□ -1.38
SMCHD1-208ENST00000583344 ESYT3A0FGR9 886 aa6.43□□□□□ -1.38
SMCHD1-208ENST00000583344 MAN2B1O00754 1011 aa6.43□□□□□ -1.38
SMCHD1-208ENST00000583344 DIAPH1O60610 1272 aaKnown RBP6.43□□□□□ -1.38
SMCHD1-208ENST00000583344 AMHP03971 560 aa6.43□□□□□ -1.38
SMCHD1-208ENST00000583344 C6orf222P0C671 652 aaPredicted RBP6.43□□□□□ -1.38
SMCHD1-208ENST00000583344 PYGMP11217 842 aa6.43□□□□□ -1.38
SMCHD1-208ENST00000583344 KRT15P19012 456 aa6.43□□□□□ -1.38
SMCHD1-208ENST00000583344 SSRP1Q08945 709 aaKnown RBP6.43□□□□□ -1.38
SMCHD1-208ENST00000583344 USP10Q14694 798 aaKnown RBP6.43□□□□□ -1.38
SMCHD1-208ENST00000583344 GPR19Q15760 415 aa6.43□□□□□ -1.38
SMCHD1-208ENST00000583344 MTERF2Q49AM1 385 aa6.43□□□□□ -1.38
SMCHD1-208ENST00000583344 GIMAP8Q8ND71 665 aaPredicted RBP6.43□□□□□ -1.38
SMCHD1-208ENST00000583344 PCDH19Q8TAB3 1148 aa6.43□□□□□ -1.38
SMCHD1-208ENST00000583344 CATSPERZQ9NTU4 200 aa6.43□□□□□ -1.38
SMCHD1-208ENST00000583344 CBLCQ9ULV8 474 aa6.43□□□□□ -1.38
SMCHD1-208ENST00000583344 AQP7O14520 342 aa6.42□□□□□ -1.38
SMCHD1-208ENST00000583344 KCNK3O14649 394 aa6.42□□□□□ -1.38
SMCHD1-208ENST00000583344 U2SURPO15042 1029 aaKnown RBP6.42□□□□□ -1.38
SMCHD1-208ENST00000583344 AMY2AP04746 511 aa6.42□□□□□ -1.38
SMCHD1-208ENST00000583344 PDE6AP16499 860 aa6.42□□□□□ -1.38
SMCHD1-208ENST00000583344 AMY2BP19961 511 aa6.42□□□□□ -1.38
SMCHD1-208ENST00000583344 RRADP55042 308 aa6.42□□□□□ -1.38
SMCHD1-208ENST00000583344 TOP3AQ13472 1001 aaPredicted RBP6.42□□□□□ -1.38
SMCHD1-208ENST00000583344 MAMDC2Q7Z304 686 aaPredicted RBP6.42□□□□□ -1.38
SMCHD1-208ENST00000583344 OSTM1Q86WC4 334 aa6.42□□□□□ -1.38
SMCHD1-208ENST00000583344 SCUBE1Q8IWY4 988 aa6.42□□□□□ -1.38
SMCHD1-208ENST00000583344 PTPRN2Q92932 1015 aa6.42□□□□□ -1.38
SMCHD1-208ENST00000583344 FBXW5Q969U6 566 aa6.42□□□□□ -1.38
SMCHD1-208ENST00000583344 NEIL1Q96FI4 390 aaPredicted RBP6.42□□□□□ -1.38
SMCHD1-208ENST00000583344 ARHGAP28Q9P2N2 729 aa6.42□□□□□ -1.38
SMCHD1-208ENST00000583344 WNT9AO14904 365 aa6.41□□□□□ -1.38
SMCHD1-208ENST00000583344 SLPIP03973 132 aa6.41□□□□□ -1.38
SMCHD1-208ENST00000583344 SRGAP2CP0DJJ0 459 aa6.41□□□□□ -1.38
SMCHD1-208ENST00000583344 POLD1P28340 1107 aa6.41□□□□□ -1.38
SMCHD1-208ENST00000583344 MC4RP32245 332 aa6.41□□□□□ -1.38
SMCHD1-208ENST00000583344 GDF5P43026 501 aa6.41□□□□□ -1.38
SMCHD1-208ENST00000583344 JAM2P57087 298 aa6.41□□□□□ -1.38
SMCHD1-208ENST00000583344 SUMO1P63165 101 aaKnown RBP6.41□□□□□ -1.38
SMCHD1-208ENST00000583344 GUCY1A3Q02108 690 aa6.41□□□□□ -1.38
SMCHD1-208ENST00000583344 RASGRF1Q13972 1273 aa6.41□□□□□ -1.38
SMCHD1-208ENST00000583344 NOLC1Q14978 699 aaKnown RBP eCLIP6.41□□□□□ -1.38
SMCHD1-208ENST00000583344 RNF151Q2KHN1 245 aa6.41□□□□□ -1.38
SMCHD1-208ENST00000583344 TAX1BP1Q86VP1 789 aa6.41□□□□□ -1.38
SMCHD1-208ENST00000583344 ZFPM1Q8IX07 1006 aa6.41□□□□□ -1.38
SMCHD1-208ENST00000583344 NLGN4XQ8N0W4 816 aa6.41□□□□□ -1.38
SMCHD1-208ENST00000583344 EXOC2Q96KP1 924 aa6.41□□□□□ -1.38
SMCHD1-208ENST00000583344 SORCS2Q96PQ0 1159 aa6.41□□□□□ -1.38
SMCHD1-208ENST00000583344 CARD11Q9BXL7 1154 aa6.41□□□□□ -1.38
SMCHD1-208ENST00000583344 ZFR2Q9UPR6 939 aaKnown RBP6.41□□□□□ -1.38
SMCHD1-208ENST00000583344 PCDHA9Q9Y5H5 950 aa6.41□□□□□ -1.38
SMCHD1-208ENST00000583344 ATP23Q9Y6H3 246 aa6.41□□□□□ -1.38
SMCHD1-208ENST00000583344 ARVCFO00192 962 aa6.4□□□□□ -1.38
SMCHD1-208ENST00000583344 FAM153BP0C7A2 387 aa6.4□□□□□ -1.38
SMCHD1-208ENST00000583344 IL13RA1P78552 427 aa6.4□□□□□ -1.38
SMCHD1-208ENST00000583344 ZNF568Q3ZCX4 644 aa6.4□□□□□ -1.38
SMCHD1-208ENST00000583344 NAALADL2Q58DX5 795 aa6.4□□□□□ -1.38
SMCHD1-208ENST00000583344 FIGNQ5HY92 759 aa6.4□□□□□ -1.38
SMCHD1-208ENST00000583344 ZBTB38Q8NAP3 1195 aaPredicted RBP6.4□□□□□ -1.38
SMCHD1-208ENST00000583344 PRAMEF25A6NGN4 478 aa6.39□□□□□ -1.39
SMCHD1-208ENST00000583344 CUTAO60888 179 aa6.39□□□□□ -1.39
SMCHD1-208ENST00000583344 PTGS1P23219 599 aa6.39□□□□□ -1.39
SMCHD1-208ENST00000583344 ACVRL1P37023 503 aa6.39□□□□□ -1.39
SMCHD1-208ENST00000583344 ADCY8P40145 1251 aa6.39□□□□□ -1.39
SMCHD1-208ENST00000583344 RAC3P60763 192 aa6.39□□□□□ -1.39
SMCHD1-208ENST00000583344 WDR72Q3MJ13 1102 aa6.39□□□□□ -1.39
SMCHD1-208ENST00000583344 FUKQ8N0W3 1084 aa6.39□□□□□ -1.39
SMCHD1-208ENST00000583344 ADOQ96SZ5 270 aa6.39□□□□□ -1.39
SMCHD1-208ENST00000583344 DPYSL5Q9BPU6 564 aa6.39□□□□□ -1.39
SMCHD1-208ENST00000583344 SEMA4AQ9H3S1 761 aa6.39□□□□□ -1.39
SMCHD1-208ENST00000583344 SMURF1Q9HCE7 757 aa6.39□□□□□ -1.39
SMCHD1-208ENST00000583344 PPP1R1BQ9UD71 204 aaPredicted RBP6.39□□□□□ -1.39
SMCHD1-208ENST00000583344 TESMINQ9Y4I5 508 aa6.39□□□□□ -1.39
SMCHD1-208ENST00000583344 CCDC66A2RUB6 948 aa6.38□□□□□ -1.39
SMCHD1-208ENST00000583344 ZNF561-AS1K7EIQ3 104 aa6.38□□□□□ -1.39
SMCHD1-208ENST00000583344 C4BPAP04003 597 aaKnown RBP6.38□□□□□ -1.39
SMCHD1-208ENST00000583344 DNM2P50570 870 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms