RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 SWSAP1Q6NVH7 229 aa10.7□□□□□ -0.7
RFFL-210ENST00000582308 MIS18BP1Q6P0N0 1132 aa10.7□□□□□ -0.7
RFFL-210ENST00000582308 CATSPER3Q86XQ3 398 aa10.7□□□□□ -0.7
RFFL-210ENST00000582308 CCDC60Q8IWA6 550 aaPredicted RBP10.7□□□□□ -0.7
RFFL-210ENST00000582308 BANK1Q8NDB2 785 aa10.7□□□□□ -0.7
RFFL-210ENST00000582308 ERMNQ8TAM6 284 aa10.7□□□□□ -0.7
RFFL-210ENST00000582308 LRRC15Q8TF66 581 aa10.7□□□□□ -0.7
RFFL-210ENST00000582308 MRPS27Q92552 414 aaKnown RBP10.7□□□□□ -0.7
RFFL-210ENST00000582308 ARMC5Q96C12 935 aa10.7□□□□□ -0.7
RFFL-210ENST00000582308 PNMA5Q96PV4 448 aa10.7□□□□□ -0.7
RFFL-210ENST00000582308 POLR3CQ9BUI4 534 aaPredicted RBP10.7□□□□□ -0.7
RFFL-210ENST00000582308 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.7□□□□□ -0.7
RFFL-210ENST00000582308 TUFT1Q9NNX1 390 aa10.7□□□□□ -0.7
RFFL-210ENST00000582308 WRAP73Q9P2S5 460 aaPredicted RBP10.7□□□□□ -0.7
RFFL-210ENST00000582308 KCNH3Q9ULD8 1083 aa10.7□□□□□ -0.7
RFFL-210ENST00000582308 HPSEQ9Y251 543 aa10.7□□□□□ -0.7
RFFL-210ENST00000582308 SCN10AQ9Y5Y9 1956 aa10.7□□□□□ -0.7
RFFL-210ENST00000582308 DNAH12Q6ZR08 3092 aa10.69□□□□□ -0.7
RFFL-210ENST00000582308 SYNRGQ9UMZ2 1314 aa10.69□□□□□ -0.7
RFFL-210ENST00000582308 MYH11P35749 1972 aa10.69□□□□□ -0.7
RFFL-210ENST00000582308 A0A087WWV3 80 aa10.69□□□□□ -0.7
RFFL-210ENST00000582308 POTEB3A0JP26 581 aa10.69□□□□□ -0.7
RFFL-210ENST00000582308 DDX11L8A8MPP1 907 aa10.69□□□□□ -0.7
RFFL-210ENST00000582308 SLC26A4O43511 780 aa10.69□□□□□ -0.7
RFFL-210ENST00000582308 ZNF862O60290 1169 aa10.69□□□□□ -0.7
RFFL-210ENST00000582308 ADAMTS4O75173 837 aa10.69□□□□□ -0.7
RFFL-210ENST00000582308 PPFIA4O75335 1185 aa10.69□□□□□ -0.7
RFFL-210ENST00000582308 MYCP01106 439 aaPredicted RBP10.69□□□□□ -0.7
RFFL-210ENST00000582308 P4HBP07237 508 aaKnown RBP10.69□□□□□ -0.7
RFFL-210ENST00000582308 CCL5P13501 91 aa10.69□□□□□ -0.7
RFFL-210ENST00000582308 QARSP47897 775 aaKnown RBP10.69□□□□□ -0.7
RFFL-210ENST00000582308 BEX3Q00994 111 aa10.69□□□□□ -0.7
RFFL-210ENST00000582308 NFKBIBQ15653 356 aa10.69□□□□□ -0.7
RFFL-210ENST00000582308 ZRSR1Q15695 479 aaKnown RBP10.69□□□□□ -0.7
RFFL-210ENST00000582308 FSCN1Q16658 493 aaKnown RBP10.69□□□□□ -0.7
RFFL-210ENST00000582308 TMEM119Q4V9L6 283 aa10.69□□□□□ -0.7
RFFL-210ENST00000582308 POTEBQ6S5H4 581 aa10.69□□□□□ -0.7
RFFL-210ENST00000582308 POTEGQ6S5H5 508 aa10.69□□□□□ -0.7
RFFL-210ENST00000582308 TRIM50Q86XT4 487 aa10.69□□□□□ -0.7
RFFL-210ENST00000582308 TPH2Q8IWU9 490 aa10.69□□□□□ -0.7
RFFL-210ENST00000582308 PDILTQ8N807 584 aa10.69□□□□□ -0.7
RFFL-210ENST00000582308 KLHDC9Q8NEP7 349 aa10.69□□□□□ -0.7
RFFL-210ENST00000582308 ENGASEQ8NFI3 743 aa10.69□□□□□ -0.7
RFFL-210ENST00000582308 GPT2Q8TD30 523 aa10.69□□□□□ -0.7
RFFL-210ENST00000582308 ZNF333Q96JL9 665 aa10.69□□□□□ -0.7
RFFL-210ENST00000582308 PLIN2Q99541 437 aa10.69□□□□□ -0.7
RFFL-210ENST00000582308 XPNPEP3Q9NQH7 507 aa10.69□□□□□ -0.7
RFFL-210ENST00000582308 PAK6Q9NQU5 681 aaPredicted RBP10.69□□□□□ -0.7
RFFL-210ENST00000582308 FAM13BQ9NYF5 915 aa10.69□□□□□ -0.7
RFFL-210ENST00000582308 GABBR1Q9UBS5 961 aa10.69□□□□□ -0.7
RFFL-210ENST00000582308 KIAA1024Q9UPX6 916 aa10.69□□□□□ -0.7
RFFL-210ENST00000582308 STK24Q9Y6E0 443 aa10.69□□□□□ -0.7
RFFL-210ENST00000582308 IGSF9BQ9UPX0 1349 aa10.68□□□□□ -0.7
RFFL-210ENST00000582308 BACH1O14867 736 aa10.68□□□□□ -0.7
RFFL-210ENST00000582308 ZBTB39O15060 712 aa10.68□□□□□ -0.7
RFFL-210ENST00000582308 POLR2DO15514 142 aaKnown RBP10.68□□□□□ -0.7
RFFL-210ENST00000582308 MSCO60682 206 aa10.68□□□□□ -0.7
RFFL-210ENST00000582308 STBD1O95210 358 aa10.68□□□□□ -0.7
RFFL-210ENST00000582308 LGALS2P05162 132 aa10.68□□□□□ -0.7
RFFL-210ENST00000582308 C6orf222P0C671 652 aaPredicted RBP10.68□□□□□ -0.7
RFFL-210ENST00000582308 PLCG1P19174 1290 aa10.68□□□□□ -0.7
RFFL-210ENST00000582308 ATP4AP20648 1035 aa10.68□□□□□ -0.7
RFFL-210ENST00000582308 TXLNAP40222 546 aa10.68□□□□□ -0.7
RFFL-210ENST00000582308 CPT1AP50416 773 aa10.68□□□□□ -0.7
RFFL-210ENST00000582308 PSMC5P62195 406 aa10.68□□□□□ -0.7
RFFL-210ENST00000582308 PSMC6P62333 389 aa10.68□□□□□ -0.7
RFFL-210ENST00000582308 SNW1Q13573 536 aaKnown RBP10.68□□□□□ -0.7
RFFL-210ENST00000582308 E2F4Q16254 413 aa10.68□□□□□ -0.7
RFFL-210ENST00000582308 DGKDQ16760 1214 aa10.68□□□□□ -0.7
RFFL-210ENST00000582308 NAALADL2Q58DX5 795 aa10.68□□□□□ -0.7
RFFL-210ENST00000582308 GNASQ5JWF2 1037 aa10.68□□□□□ -0.7
RFFL-210ENST00000582308 UTP14CQ5TAP6 766 aaKnown RBP10.68□□□□□ -0.7
RFFL-210ENST00000582308 RRAGBQ5VZM2 374 aa10.68□□□□□ -0.7
RFFL-210ENST00000582308 HAUS3Q68CZ6 603 aa10.68□□□□□ -0.7
RFFL-210ENST00000582308 CCDC73Q6ZRK6 1079 aa10.68□□□□□ -0.7
RFFL-210ENST00000582308 KCNK18Q7Z418 384 aa10.68□□□□□ -0.7
RFFL-210ENST00000582308 FMR1NBQ8N0W7 255 aaPredicted RBP10.68□□□□□ -0.7
RFFL-210ENST00000582308 NEK9Q8TD19 979 aa10.68□□□□□ -0.7
RFFL-210ENST00000582308 AFAP1L1Q8TED9 768 aa10.68□□□□□ -0.7
RFFL-210ENST00000582308 CALML4Q96GE6 196 aa10.68□□□□□ -0.7
RFFL-210ENST00000582308 LXNQ9BS40 222 aa10.68□□□□□ -0.7
RFFL-210ENST00000582308 C16orf70Q9BSU1 422 aa10.68□□□□□ -0.7
RFFL-210ENST00000582308 MCOLN1Q9GZU1 580 aa10.68□□□□□ -0.7
RFFL-210ENST00000582308 ZSWIM4Q9H7M6 989 aa10.68□□□□□ -0.7
RFFL-210ENST00000582308 ZNF302Q9NR11 478 aa10.68□□□□□ -0.7
RFFL-210ENST00000582308 DDX19AQ9NUU7 478 aaKnown RBP10.68□□□□□ -0.7
RFFL-210ENST00000582308 MAFBQ9Y5Q3 323 aaPredicted RBP10.68□□□□□ -0.7
RFFL-210ENST00000582308 BRCA2P51587 3418 aa10.68□□□□□ -0.7
RFFL-210ENST00000582308 EMSYQ7Z589 1322 aa10.67□□□□□ -0.7
RFFL-210ENST00000582308 KDM3AQ9Y4C1 1321 aa10.67□□□□□ -0.7
RFFL-210ENST00000582308 NR1I2O75469 434 aa10.67□□□□□ -0.7
RFFL-210ENST00000582308 ZNF202O95125 648 aa10.67□□□□□ -0.7
RFFL-210ENST00000582308 LYPLA2O95372 231 aa10.67□□□□□ -0.7
RFFL-210ENST00000582308 ZNF286BP0CG31 522 aa10.67□□□□□ -0.7
RFFL-210ENST00000582308 MUTP22033 750 aa10.67□□□□□ -0.7
RFFL-210ENST00000582308 SYKP43405 635 aa10.67□□□□□ -0.7
RFFL-210ENST00000582308 STAT5BP51692 787 aa10.67□□□□□ -0.7
RFFL-210ENST00000582308 FAM160A1Q05DH4 1040 aa10.67□□□□□ -0.7
RFFL-210ENST00000582308 LRRC41Q15345 812 aa10.67□□□□□ -0.7
RFFL-210ENST00000582308 LONRF3Q496Y0 759 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms