RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 PIGSQ96S52 555 aa14.73□□□□□ -0.05
SS18-219ENST00000581570 KRT23Q9C075 422 aa14.73□□□□□ -0.05
SS18-219ENST00000581570 MAD2L2Q9UI95 211 aa14.73□□□□□ -0.05
SS18-219ENST00000581570 CDY2AQ9Y6F7 541 aa14.73□□□□□ -0.05
SS18-219ENST00000581570 PALM3A6NDB9 673 aaPredicted RBP14.72□□□□□ -0.05
SS18-219ENST00000581570 GLP2RO95838 553 aa14.72□□□□□ -0.05
SS18-219ENST00000581570 PPFIA1Q13136 1202 aa14.72□□□□□ -0.05
SS18-219ENST00000581570 PAN2Q504Q3 1202 aaKnown RBP14.72□□□□□ -0.05
SS18-219ENST00000581570 RTN4RL1Q86UN2 441 aaPredicted RBP14.72□□□□□ -0.05
SS18-219ENST00000581570 NPAS4Q8IUM7 802 aa14.72□□□□□ -0.05
SS18-219ENST00000581570 DNAJB3Q8WWF6 145 aa14.72□□□□□ -0.05
SS18-219ENST00000581570 LINC01599Q8WXQ3 324 aa14.72□□□□□ -0.05
SS18-219ENST00000581570 SENP7Q9BQF6 1050 aa14.72□□□□□ -0.05
SS18-219ENST00000581570 TLE6Q9H808 572 aa14.72□□□□□ -0.05
SS18-219ENST00000581570 AGO3Q9H9G7 860 aaKnown RBP14.72□□□□□ -0.05
SS18-219ENST00000581570 TRIOO75962 3097 aa14.72□□□□□ -0.05
SS18-219ENST00000581570 PPFIA3O75145 1194 aa14.71□□□□□ -0.05
SS18-219ENST00000581570 STAG3L1P0CL83 205 aa14.71□□□□□ -0.05
SS18-219ENST00000581570 ATF7P17544 494 aaPredicted RBP14.71□□□□□ -0.05
SS18-219ENST00000581570 CD52P31358 61 aa14.71□□□□□ -0.05
SS18-219ENST00000581570 GRIK4Q16099 956 aa14.71□□□□□ -0.05
SS18-219ENST00000581570 IMMTQ16891 758 aaKnown RBP14.71□□□□□ -0.05
SS18-219ENST00000581570 CRIPAKQ8N1N5 446 aa14.71□□□□□ -0.05
SS18-219ENST00000581570 MICAL1Q8TDZ2 1067 aa14.71□□□□□ -0.05
SS18-219ENST00000581570 RIOX1Q9H6W3 641 aa14.71□□□□□ -0.05
SS18-219ENST00000581570 CNNM2Q9H8M5 875 aa14.71□□□□□ -0.05
SS18-219ENST00000581570 TUBE1Q9UJT0 475 aa14.71□□□□□ -0.05
SS18-219ENST00000581570 PCDHGC5Q9Y5F6 944 aa14.71□□□□□ -0.05
SS18-219ENST00000581570 FRMPD4Q14CM0 1322 aa14.7□□□□□ -0.06
SS18-219ENST00000581570 PNMA6FA0A0J9YX94 578 aa14.7□□□□□ -0.06
SS18-219ENST00000581570 MBLAC1A4D2B0 266 aaPredicted RBP14.7□□□□□ -0.06
SS18-219ENST00000581570 H0Y858 1186 aa14.7□□□□□ -0.06
SS18-219ENST00000581570 PER2O15055 1255 aa14.7□□□□□ -0.06
SS18-219ENST00000581570 TCF7P36402 384 aaPredicted RBP14.7□□□□□ -0.06
SS18-219ENST00000581570 MRPS6P82932 125 aaKnown RBP14.7□□□□□ -0.06
SS18-219ENST00000581570 SEC23AQ15436 765 aa14.7□□□□□ -0.06
SS18-219ENST00000581570 SLC35G1Q2M3R5 365 aa14.7□□□□□ -0.06
SS18-219ENST00000581570 NLRX1Q86UT6 975 aa14.7□□□□□ -0.06
SS18-219ENST00000581570 GIMAP8Q8ND71 665 aaPredicted RBP14.7□□□□□ -0.06
SS18-219ENST00000581570 SUSD6Q92537 303 aa14.7□□□□□ -0.06
SS18-219ENST00000581570 FTHL17Q9BXU8 183 aa14.7□□□□□ -0.06
SS18-219ENST00000581570 TLR9Q9NR96 1032 aa14.7□□□□□ -0.06
SS18-219ENST00000581570 ATG2AQ2TAZ0 1938 aa14.7□□□□□ -0.06
SS18-219ENST00000581570 USP34Q70CQ2 3546 aa14.7□□□□□ -0.06
SS18-219ENST00000581570 MARK3P27448 753 aa14.69□□□□□ -0.06
SS18-219ENST00000581570 NUBP1P53384 320 aa14.69□□□□□ -0.06
SS18-219ENST00000581570 PTPN21Q16825 1174 aa14.69□□□□□ -0.06
SS18-219ENST00000581570 MARCH8Q5T0T0 291 aa14.69□□□□□ -0.06
SS18-219ENST00000581570 IER5Q5VY09 327 aa14.69□□□□□ -0.06
SS18-219ENST00000581570 CWC27Q6UX04 472 aaKnown RBP14.69□□□□□ -0.06
SS18-219ENST00000581570 ATP8B4Q8TF62 1192 aa14.69□□□□□ -0.06
SS18-219ENST00000581570 SEPT1Q8WYJ6 367 aa14.69□□□□□ -0.06
SS18-219ENST00000581570 NEK1Q96PY6 1258 aa14.69□□□□□ -0.06
SS18-219ENST00000581570 ERAP1Q9NZ08 941 aa14.69□□□□□ -0.06
SS18-219ENST00000581570 LRFN2Q9ULH4 789 aa14.69□□□□□ -0.06
SS18-219ENST00000581570 SQORQ9Y6N5 450 aa14.69□□□□□ -0.06
SS18-219ENST00000581570 GSTTP1A0A1W2PQM5 241 aa14.68□□□□□ -0.06
SS18-219ENST00000581570 CYTH3O43739 400 aa14.68□□□□□ -0.06
SS18-219ENST00000581570 RPLP2P05387 115 aaKnown RBP14.68□□□□□ -0.06
SS18-219ENST00000581570 SCG2P13521 617 aa14.68□□□□□ -0.06
SS18-219ENST00000581570 GATMP50440 423 aa14.68□□□□□ -0.06
SS18-219ENST00000581570 IGBP1P78318 339 aa14.68□□□□□ -0.06
SS18-219ENST00000581570 RBM10P98175 930 aaKnown RBP14.68□□□□□ -0.06
SS18-219ENST00000581570 UBE3AQ05086 875 aa14.68□□□□□ -0.06
SS18-219ENST00000581570 GRM4Q14833 912 aa14.68□□□□□ -0.06
SS18-219ENST00000581570 SPOUT1Q5T280 376 aaKnown RBP14.68□□□□□ -0.06
SS18-219ENST00000581570 PCNX4Q63HM2 1172 aa14.68□□□□□ -0.06
SS18-219ENST00000581570 XRRA1Q6P2D8 792 aa14.68□□□□□ -0.06
SS18-219ENST00000581570 ZBTB33Q86T24 672 aa14.68□□□□□ -0.06
SS18-219ENST00000581570 GLG1Q92896 1179 aa14.68□□□□□ -0.06
SS18-219ENST00000581570 RIPOR3Q96MK2 946 aa14.68□□□□□ -0.06
SS18-219ENST00000581570 CDCA3Q99618 268 aaPredicted RBP14.68□□□□□ -0.06
SS18-219ENST00000581570 DSCC1Q9BVC3 393 aa14.68□□□□□ -0.06
SS18-219ENST00000581570 FAM49AQ9H0Q0 323 aaPredicted RBP14.68□□□□□ -0.06
SS18-219ENST00000581570 PADI3Q9ULW8 664 aa14.68□□□□□ -0.06
SS18-219ENST00000581570 PCDHB12Q9Y5F1 795 aa14.68□□□□□ -0.06
SS18-219ENST00000581570 MYH6P13533 1939 aa14.68□□□□□ -0.06
SS18-219ENST00000581570 TTC3P53804 2025 aa14.68□□□□□ -0.06
SS18-219ENST00000581570 FSD2A1L4K1 749 aa14.67□□□□□ -0.06
SS18-219ENST00000581570 RRN3P2A6NIE6 340 aa14.67□□□□□ -0.06
SS18-219ENST00000581570 PROB1E7EW31 1015 aa14.67□□□□□ -0.06
SS18-219ENST00000581570 M0QZ92 97 aa14.67□□□□□ -0.06
SS18-219ENST00000581570 ATP9AO75110 1047 aa14.67□□□□□ -0.06
SS18-219ENST00000581570 PDGFBP01127 241 aaPredicted RBP14.67□□□□□ -0.06
SS18-219ENST00000581570 IBSPP21815 317 aaPredicted RBP14.67□□□□□ -0.06
SS18-219ENST00000581570 DUSP6Q16828 381 aa14.67□□□□□ -0.06
SS18-219ENST00000581570 CYB5R4Q7L1T6 521 aa14.67□□□□□ -0.06
SS18-219ENST00000581570 ASCL5Q7RTU5 278 aa14.67□□□□□ -0.06
SS18-219ENST00000581570 VN1R2Q8NFZ6 395 aa14.67□□□□□ -0.06
SS18-219ENST00000581570 SMARCC2Q8TAQ2 1214 aa14.67□□□□□ -0.06
SS18-219ENST00000581570 PIBF1Q8WXW3 757 aa14.67□□□□□ -0.06
SS18-219ENST00000581570 CUL5Q93034 780 aa14.67□□□□□ -0.06
SS18-219ENST00000581570 ZBTB10Q96DT7 871 aa14.67□□□□□ -0.06
SS18-219ENST00000581570 SMARCAD1Q9H4L7 1026 aa14.67□□□□□ -0.06
SS18-219ENST00000581570 AAASQ9NRG9 546 aa14.67□□□□□ -0.06
SS18-219ENST00000581570 DIAPH3Q9NSV4 1193 aa14.67□□□□□ -0.06
SS18-219ENST00000581570 TRPV2Q9Y5S1 764 aa14.67□□□□□ -0.06
SS18-219ENST00000581570 GALR2O43603 387 aaPredicted RBP14.66□□□□□ -0.06
SS18-219ENST00000581570 INSRRP14616 1297 aa14.66□□□□□ -0.06
SS18-219ENST00000581570 KCNA2P16389 499 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms