RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 PCDHA10Q9Y5I2 948 aa14.31□□□□□ -0.12
SNORD55-201ENST00000581525 DOCK5Q9H7D0 1870 aa14.3□□□□□ -0.12
SNORD55-201ENST00000581525 CAND2O75155 1236 aa14.3□□□□□ -0.12
SNORD55-201ENST00000581525 PFKMP08237 780 aa14.3□□□□□ -0.12
SNORD55-201ENST00000581525 CKBP12277 381 aa14.3□□□□□ -0.12
SNORD55-201ENST00000581525 ATP4AP20648 1035 aa14.3□□□□□ -0.12
SNORD55-201ENST00000581525 ZNF200P98182 395 aaPredicted RBP14.3□□□□□ -0.12
SNORD55-201ENST00000581525 SP4Q02446 784 aa14.3□□□□□ -0.12
SNORD55-201ENST00000581525 TRIM29Q14134 588 aa14.3□□□□□ -0.12
SNORD55-201ENST00000581525 PLCB4Q15147 1175 aa14.3□□□□□ -0.12
SNORD55-201ENST00000581525 C9orf50Q5SZB4 431 aa14.3□□□□□ -0.12
SNORD55-201ENST00000581525 MARCH8Q5T0T0 291 aa14.3□□□□□ -0.12
SNORD55-201ENST00000581525 MIS18BP1Q6P0N0 1132 aa14.3□□□□□ -0.12
SNORD55-201ENST00000581525 RPUSD2Q8IZ73 545 aaKnown RBP14.3□□□□□ -0.12
SNORD55-201ENST00000581525 CCDC155Q8N6L0 562 aa14.3□□□□□ -0.12
SNORD55-201ENST00000581525 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.3□□□□□ -0.12
SNORD55-201ENST00000581525 SETD4Q9NVD3 440 aa14.3□□□□□ -0.12
SNORD55-201ENST00000581525 RRN3P2A6NIE6 340 aa14.29□□□□□ -0.12
SNORD55-201ENST00000581525 TREHO43280 583 aa14.29□□□□□ -0.12
SNORD55-201ENST00000581525 CXCL10P02778 98 aa14.29□□□□□ -0.12
SNORD55-201ENST00000581525 U2AF2P26368 475 aaKnown RBP eCLIP14.29□□□□□ -0.12
SNORD55-201ENST00000581525 SFNP31947 248 aa14.29□□□□□ -0.12
SNORD55-201ENST00000581525 LETM2Q2VYF4 491 aa14.29□□□□□ -0.12
SNORD55-201ENST00000581525 FAM26DQ5JW98 314 aa14.29□□□□□ -0.12
SNORD55-201ENST00000581525 CCDC60Q8IWA6 550 aaPredicted RBP14.29□□□□□ -0.12
SNORD55-201ENST00000581525 LMBR1Q8WVP7 490 aa14.29□□□□□ -0.12
SNORD55-201ENST00000581525 HERVK_113Q902F9 699 aa14.29□□□□□ -0.12
SNORD55-201ENST00000581525 HAS1Q92839 578 aa14.29□□□□□ -0.12
SNORD55-201ENST00000581525 GLG1Q92896 1179 aa14.29□□□□□ -0.12
SNORD55-201ENST00000581525 ATP6V0A1Q93050 837 aa14.29□□□□□ -0.12
SNORD55-201ENST00000581525 WNT8BQ93098 351 aa14.29□□□□□ -0.12
SNORD55-201ENST00000581525 C8orf76Q96K31 380 aa14.29□□□□□ -0.12
SNORD55-201ENST00000581525 AZI2Q9H6S1 392 aa14.29□□□□□ -0.12
SNORD55-201ENST00000581525 DDX25Q9UHL0 483 aaKnown RBP14.29□□□□□ -0.12
SNORD55-201ENST00000581525 FAM205CA6NFA0 338 aa14.28□□□□□ -0.12
SNORD55-201ENST00000581525 WDR64B1ANS9 1081 aa14.28□□□□□ -0.12
SNORD55-201ENST00000581525 SLC37A4O43826 429 aa14.28□□□□□ -0.12
SNORD55-201ENST00000581525 HBP1O60381 514 aa14.28□□□□□ -0.12
SNORD55-201ENST00000581525 PSAPP07602 524 aa14.28□□□□□ -0.12
SNORD55-201ENST00000581525 INSRRP14616 1297 aa14.28□□□□□ -0.12
SNORD55-201ENST00000581525 SELPP16109 830 aa14.28□□□□□ -0.12
SNORD55-201ENST00000581525 CCL23P55773 120 aa14.28□□□□□ -0.12
SNORD55-201ENST00000581525 PPP2R5CQ13362 524 aa14.28□□□□□ -0.12
SNORD55-201ENST00000581525 LRCH2Q5VUJ6 765 aa14.28□□□□□ -0.12
SNORD55-201ENST00000581525 FAM160B1Q5W0V3 765 aa14.28□□□□□ -0.12
SNORD55-201ENST00000581525 SWSAP1Q6NVH7 229 aa14.28□□□□□ -0.12
SNORD55-201ENST00000581525 PSRC1Q6PGN9 363 aaPredicted RBP14.28□□□□□ -0.12
SNORD55-201ENST00000581525 RETREG2Q8NC44 543 aa14.28□□□□□ -0.12
SNORD55-201ENST00000581525 TEKT3Q9BXF9 490 aa14.28□□□□□ -0.12
SNORD55-201ENST00000581525 UNC45AQ9H3U1 944 aa14.28□□□□□ -0.12
SNORD55-201ENST00000581525 DISC1Q9NRI5 854 aa14.28□□□□□ -0.12
SNORD55-201ENST00000581525 NOD1Q9Y239 953 aa14.28□□□□□ -0.12
SNORD55-201ENST00000581525 IGSF9BQ9UPX0 1349 aa14.27□□□□□ -0.12
SNORD55-201ENST00000581525 POTEB3A0JP26 581 aa14.27□□□□□ -0.13
SNORD55-201ENST00000581525 ZBTB42B2RXF5 422 aa14.27□□□□□ -0.13
SNORD55-201ENST00000581525 GAS7O60861 476 aa14.27□□□□□ -0.13
SNORD55-201ENST00000581525 FGBP02675 491 aa14.27□□□□□ -0.13
SNORD55-201ENST00000581525 RPLP2P05387 115 aaKnown RBP14.27□□□□□ -0.13
SNORD55-201ENST00000581525 JAK3P52333 1124 aa14.27□□□□□ -0.13
SNORD55-201ENST00000581525 SPIRE1Q08AE8 756 aa14.27□□□□□ -0.13
SNORD55-201ENST00000581525 ORC2Q13416 577 aaPredicted RBP14.27□□□□□ -0.13
SNORD55-201ENST00000581525 SAFBQ15424 915 aaKnown RBP eCLIP14.27□□□□□ -0.13
SNORD55-201ENST00000581525 GRIK4Q16099 956 aa14.27□□□□□ -0.13
SNORD55-201ENST00000581525 ZNF618Q5T7W0 954 aa14.27□□□□□ -0.13
SNORD55-201ENST00000581525 TAF2Q6P1X5 1199 aa14.27□□□□□ -0.13
SNORD55-201ENST00000581525 POTEBQ6S5H4 581 aa14.27□□□□□ -0.13
SNORD55-201ENST00000581525 ZNF365Q70YC5 407 aa14.27□□□□□ -0.13
SNORD55-201ENST00000581525 FAM184AQ8NB25 1140 aa14.27□□□□□ -0.13
SNORD55-201ENST00000581525 ATP8B4Q8TF62 1192 aa14.27□□□□□ -0.13
SNORD55-201ENST00000581525 SCLYQ96I15 445 aa14.27□□□□□ -0.13
SNORD55-201ENST00000581525 MTMR9Q96QG7 549 aa14.27□□□□□ -0.13
SNORD55-201ENST00000581525 ZNF302Q9NR11 478 aa14.27□□□□□ -0.13
SNORD55-201ENST00000581525 VAV3Q9UKW4 847 aa14.27□□□□□ -0.13
SNORD55-201ENST00000581525 KIF3AQ9Y496 699 aa14.27□□□□□ -0.13
SNORD55-201ENST00000581525 COL1A2P08123 1366 aa14.26□□□□□ -0.13
SNORD55-201ENST00000581525 DDX39AO00148 427 aaKnown RBP14.26□□□□□ -0.13
SNORD55-201ENST00000581525 SOX1O00570 391 aaPredicted RBP14.26□□□□□ -0.13
SNORD55-201ENST00000581525 CCNT1O60563 726 aaKnown RBP14.26□□□□□ -0.13
SNORD55-201ENST00000581525 STBD1O95210 358 aa14.26□□□□□ -0.13
SNORD55-201ENST00000581525 TRAPPC10P48553 1259 aa14.26□□□□□ -0.13
SNORD55-201ENST00000581525 CHMP4BP1P59074 171 aa14.26□□□□□ -0.13
SNORD55-201ENST00000581525 SMAD3P84022 425 aaKnown RBP14.26□□□□□ -0.13
SNORD55-201ENST00000581525 PPFIA1Q13136 1202 aa14.26□□□□□ -0.13
SNORD55-201ENST00000581525 MBTPS1Q14703 1052 aa14.26□□□□□ -0.13
SNORD55-201ENST00000581525 ZNF484Q5JVG2 852 aa14.26□□□□□ -0.13
SNORD55-201ENST00000581525 FAM109BQ6ICB4 259 aaPredicted RBP14.26□□□□□ -0.13
SNORD55-201ENST00000581525 PDXDC2PQ6P474 469 aa14.26□□□□□ -0.13
SNORD55-201ENST00000581525 LRRC8DQ7L1W4 858 aa14.26□□□□□ -0.13
SNORD55-201ENST00000581525 BBXQ8WY36 941 aaPredicted RBP14.26□□□□□ -0.13
SNORD55-201ENST00000581525 SNX21Q969T3 373 aa14.26□□□□□ -0.13
SNORD55-201ENST00000581525 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.26□□□□□ -0.13
SNORD55-201ENST00000581525 PCDHA2Q9Y5H9 948 aa14.26□□□□□ -0.13
SNORD55-201ENST00000581525 SMIM35A0A1B0GVV1 85 aa14.25□□□□□ -0.13
SNORD55-201ENST00000581525 WNT7AO00755 349 aa14.25□□□□□ -0.13
SNORD55-201ENST00000581525 ZNF862O60290 1169 aa14.25□□□□□ -0.13
SNORD55-201ENST00000581525 NBNO60934 754 aa14.25□□□□□ -0.13
SNORD55-201ENST00000581525 ACRP10323 421 aa14.25□□□□□ -0.13
SNORD55-201ENST00000581525 MARK3P27448 753 aa14.25□□□□□ -0.13
SNORD55-201ENST00000581525 MKRN4PQ13434 485 aaPredicted RBP14.25□□□□□ -0.13
SNORD55-201ENST00000581525 FAM43BQ6ZT52 329 aaPredicted RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms