RNA–Protein interactions for RNA: ENST00000580556.5

CCDC84-209, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-209ENST00000580556 SEPT14Q6ZU15 432 aa13.71□□□□□ -0.21
CCDC84-209ENST00000580556 EEPD1Q7L9B9 569 aa13.71□□□□□ -0.21
CCDC84-209ENST00000580556 POTEDQ86YR6 584 aa13.71□□□□□ -0.21
CCDC84-209ENST00000580556 SLFN12Q8IYM2 578 aa13.71□□□□□ -0.21
CCDC84-209ENST00000580556 FOXD4L4Q8WXT5 416 aaPredicted RBP13.71□□□□□ -0.21
CCDC84-209ENST00000580556 SLC5A5Q92911 643 aa13.71□□□□□ -0.21
CCDC84-209ENST00000580556 EMID1Q96A84 441 aaPredicted RBP13.71□□□□□ -0.21
CCDC84-209ENST00000580556 FAM20AQ96MK3 541 aa13.71□□□□□ -0.21
CCDC84-209ENST00000580556 TSPYL2Q9H2G4 693 aaPredicted RBP13.71□□□□□ -0.21
CCDC84-209ENST00000580556 C11orf16Q9NQ32 467 aa13.71□□□□□ -0.21
CCDC84-209ENST00000580556 DDX41Q9UJV9 622 aaKnown RBP13.71□□□□□ -0.21
CCDC84-209ENST00000580556 HCN4Q9Y3Q4 1203 aa13.71□□□□□ -0.21
CCDC84-209ENST00000580556 PCDHB6Q9Y5E3 794 aa13.71□□□□□ -0.21
CCDC84-209ENST00000580556 PRRC2BQ5JSZ5 2229 aaKnown RBP13.71□□□□□ -0.22
CCDC84-209ENST00000580556 NFASCO94856 1347 aa13.7□□□□□ -0.22
CCDC84-209ENST00000580556 A0A0U1RQG5 324 aaPredicted RBP13.7□□□□□ -0.22
CCDC84-209ENST00000580556 FAM86C2PA6NEL3 165 aa13.7□□□□□ -0.22
CCDC84-209ENST00000580556 IPO5O00410 1097 aaKnown RBP13.7□□□□□ -0.22
CCDC84-209ENST00000580556 CTAGE5O15320 804 aa13.7□□□□□ -0.22
CCDC84-209ENST00000580556 MSH4O15457 936 aa13.7□□□□□ -0.22
CCDC84-209ENST00000580556 CD4P01730 458 aa13.7□□□□□ -0.22
CCDC84-209ENST00000580556 ARP10275 920 aa13.7□□□□□ -0.22
CCDC84-209ENST00000580556 UBA1P22314 1058 aaKnown RBP13.7□□□□□ -0.22
CCDC84-209ENST00000580556 CST5P28325 142 aaPredicted RBP13.7□□□□□ -0.22
CCDC84-209ENST00000580556 PRPHP41219 470 aa13.7□□□□□ -0.22
CCDC84-209ENST00000580556 CCL23P55773 120 aa13.7□□□□□ -0.22
CCDC84-209ENST00000580556 ATP2C1P98194 919 aaPredicted RBP13.7□□□□□ -0.22
CCDC84-209ENST00000580556 NEDD9Q14511 834 aa13.7□□□□□ -0.22
CCDC84-209ENST00000580556 NBR1Q14596 966 aa13.7□□□□□ -0.22
CCDC84-209ENST00000580556 ZNF174Q15697 407 aa13.7□□□□□ -0.22
CCDC84-209ENST00000580556 CALCRLQ16602 461 aa13.7□□□□□ -0.22
CCDC84-209ENST00000580556 PPP2R2DQ66LE6 453 aa13.7□□□□□ -0.22
CCDC84-209ENST00000580556 ARL6IP4Q66PJ3 421 aaKnown RBP13.7□□□□□ -0.22
CCDC84-209ENST00000580556 FAM173BQ6P4H8 233 aa13.7□□□□□ -0.22
CCDC84-209ENST00000580556 C4orf32Q8N8J7 132 aa13.7□□□□□ -0.22
CCDC84-209ENST00000580556 MTMR9Q96QG7 549 aa13.7□□□□□ -0.22
CCDC84-209ENST00000580556 RIT2Q99578 217 aa13.7□□□□□ -0.22
CCDC84-209ENST00000580556 ZNF577Q9BSK1 485 aa13.7□□□□□ -0.22
CCDC84-209ENST00000580556 CERS4Q9HA82 394 aa13.7□□□□□ -0.22
CCDC84-209ENST00000580556 TBC1D22BQ9NU19 505 aa13.7□□□□□ -0.22
CCDC84-209ENST00000580556 CFAP45Q9UL16 551 aa13.7□□□□□ -0.22
CCDC84-209ENST00000580556 Q9Y3F1 56 aa13.7□□□□□ -0.22
CCDC84-209ENST00000580556 ARIH2O95376 493 aa13.69□□□□□ -0.22
CCDC84-209ENST00000580556 BAG4O95429 457 aaKnown RBP13.69□□□□□ -0.22
CCDC84-209ENST00000580556 YEATS4O95619 227 aa13.69□□□□□ -0.22
CCDC84-209ENST00000580556 OR52Z1P0C646 297 aa13.69□□□□□ -0.22
CCDC84-209ENST00000580556 TXNP10599 105 aaKnown RBP13.69□□□□□ -0.22
CCDC84-209ENST00000580556 ATP2B1P20020 1258 aa13.69□□□□□ -0.22
CCDC84-209ENST00000580556 PTGS1P23219 599 aa13.69□□□□□ -0.22
CCDC84-209ENST00000580556 BEX3Q00994 111 aa13.69□□□□□ -0.22
CCDC84-209ENST00000580556 TNFAIP2Q03169 654 aa13.69□□□□□ -0.22
CCDC84-209ENST00000580556 PTGDRQ13258 359 aa13.69□□□□□ -0.22
CCDC84-209ENST00000580556 ITGB3BPQ13352 177 aaPredicted RBP13.69□□□□□ -0.22
CCDC84-209ENST00000580556 SF3A1Q15459 793 aaKnown RBP13.69□□□□□ -0.22
CCDC84-209ENST00000580556 GNASQ5JWF2 1037 aa13.69□□□□□ -0.22
CCDC84-209ENST00000580556 TMEM31Q5JXX7 168 aa13.69□□□□□ -0.22
CCDC84-209ENST00000580556 METTL7BQ6UX53 244 aa13.69□□□□□ -0.22
CCDC84-209ENST00000580556 HAS1Q92839 578 aa13.69□□□□□ -0.22
CCDC84-209ENST00000580556 VWCEQ96DN2 955 aa13.69□□□□□ -0.22
CCDC84-209ENST00000580556 ZFP91Q96JP5 570 aaPredicted RBP13.69□□□□□ -0.22
CCDC84-209ENST00000580556 USP28Q96RU2 1077 aa13.69□□□□□ -0.22
CCDC84-209ENST00000580556 PDGFCQ9NRA1 345 aa13.69□□□□□ -0.22
CCDC84-209ENST00000580556 GNEQ9Y223 722 aaKnown RBP13.69□□□□□ -0.22
CCDC84-209ENST00000580556 EPOPA6NHQ4 379 aa13.68□□□□□ -0.22
CCDC84-209ENST00000580556 TLR3O15455 904 aaKnown RBP13.68□□□□□ -0.22
CCDC84-209ENST00000580556 DHX15O43143 795 aaKnown RBP13.68□□□□□ -0.22
CCDC84-209ENST00000580556 TLL1O43897 1013 aa13.68□□□□□ -0.22
CCDC84-209ENST00000580556 ATP9AO75110 1047 aa13.68□□□□□ -0.22
CCDC84-209ENST00000580556 PSMD10O75832 226 aa13.68□□□□□ -0.22
CCDC84-209ENST00000580556 SMPD1P17405 629 aa13.68□□□□□ -0.22
CCDC84-209ENST00000580556 GJA9P57773 515 aa13.68□□□□□ -0.22
CCDC84-209ENST00000580556 NKX3-2P78367 333 aa13.68□□□□□ -0.22
CCDC84-209ENST00000580556 KRT85P78386 507 aa13.68□□□□□ -0.22
CCDC84-209ENST00000580556 SP2Q02086 613 aa13.68□□□□□ -0.22
CCDC84-209ENST00000580556 DNM1Q05193 864 aaKnown RBP13.68□□□□□ -0.22
CCDC84-209ENST00000580556 PTPAQ15257 358 aa13.68□□□□□ -0.22
CCDC84-209ENST00000580556 ALYREFQ86V81 257 aaKnown RBP13.68□□□□□ -0.22
CCDC84-209ENST00000580556 PCSK9Q8NBP7 692 aaKnown RBP13.68□□□□□ -0.22
CCDC84-209ENST00000580556 SDF4Q9BRK5 362 aa13.68□□□□□ -0.22
CCDC84-209ENST00000580556 UPF3AQ9H1J1 476 aaKnown RBP13.68□□□□□ -0.22
CCDC84-209ENST00000580556 WNT8AQ9H1J5 351 aa13.68□□□□□ -0.22
CCDC84-209ENST00000580556 TMEM60Q9H2L4 133 aa13.68□□□□□ -0.22
CCDC84-209ENST00000580556 ARIH1Q9Y4X5 557 aaPredicted RBP13.68□□□□□ -0.22
CCDC84-209ENST00000580556 MTCH2Q9Y6C9 303 aa13.68□□□□□ -0.22
CCDC84-209ENST00000580556 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.67□□□□□ -0.22
CCDC84-209ENST00000580556 GAS7O60861 476 aa13.67□□□□□ -0.22
CCDC84-209ENST00000580556 GGPS1O95749 300 aa13.67□□□□□ -0.22
CCDC84-209ENST00000580556 GH1P01241 217 aa13.67□□□□□ -0.22
CCDC84-209ENST00000580556 KRT76Q01546 638 aa13.67□□□□□ -0.22
CCDC84-209ENST00000580556 ARHGAP1Q07960 439 aa13.67□□□□□ -0.22
CCDC84-209ENST00000580556 PPP2R5CQ13362 524 aa13.67□□□□□ -0.22
CCDC84-209ENST00000580556 LAMC2Q13753 1193 aa13.67□□□□□ -0.22
CCDC84-209ENST00000580556 SLC39A14Q15043 492 aa13.67□□□□□ -0.22
CCDC84-209ENST00000580556 LY6KQ17RY6 165 aa13.67□□□□□ -0.22
CCDC84-209ENST00000580556 AAK1Q2M2I8 961 aa13.67□□□□□ -0.22
CCDC84-209ENST00000580556 CELF3Q5SZQ8 465 aaKnown RBP13.67□□□□□ -0.22
CCDC84-209ENST00000580556 LRCH2Q5VUJ6 765 aa13.67□□□□□ -0.22
CCDC84-209ENST00000580556 ZNF746Q6NUN9 644 aaPredicted RBP13.67□□□□□ -0.22
CCDC84-209ENST00000580556 B3GNT9Q6UX72 402 aa13.67□□□□□ -0.22
CCDC84-209ENST00000580556 CXCL17Q6UXB2 119 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms