RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 CKBP12277 381 aa28.26■■■□□ 2.11
CDC42EP4-205ENST00000580315 XBP1P17861 261 aa28.26■■■□□ 2.11
CDC42EP4-205ENST00000580315 GALNT17Q6IS24 598 aa28.26■■■□□ 2.11
CDC42EP4-205ENST00000580315 TMCO2Q7Z6W1 182 aaPredicted RBP28.26■■■□□ 2.11
CDC42EP4-205ENST00000580315 RASGRP4Q8TDF6 673 aa28.26■■■□□ 2.11
CDC42EP4-205ENST00000580315 CRYGNQ8WXF5 182 aa28.26■■■□□ 2.11
CDC42EP4-205ENST00000580315 C22orf23Q9BZE7 217 aa28.26■■■□□ 2.11
CDC42EP4-205ENST00000580315 TRIP12Q14669 1992 aaPredicted RBP28.26■■■□□ 2.11
CDC42EP4-205ENST00000580315 NFASCO94856 1347 aa28.25■■■□□ 2.11
CDC42EP4-205ENST00000580315 LCHNA4D1U4 455 aa28.25■■■□□ 2.11
CDC42EP4-205ENST00000580315 ADAMTS3O15072 1205 aa28.25■■■□□ 2.11
CDC42EP4-205ENST00000580315 NBNO60934 754 aa28.25■■■□□ 2.11
CDC42EP4-205ENST00000580315 CXCL10P02778 98 aa28.25■■■□□ 2.11
CDC42EP4-205ENST00000580315 ARP10275 920 aa28.25■■■□□ 2.11
CDC42EP4-205ENST00000580315 TCF7P36402 384 aaPredicted RBP28.25■■■□□ 2.11
CDC42EP4-205ENST00000580315 GRB10Q13322 594 aa28.25■■■□□ 2.11
CDC42EP4-205ENST00000580315 ME3Q16798 604 aa28.25■■■□□ 2.11
CDC42EP4-205ENST00000580315 CNKSR3Q6P9H4 555 aa28.25■■■□□ 2.11
CDC42EP4-205ENST00000580315 PLA2G4DQ86XP0 818 aa28.25■■■□□ 2.11
CDC42EP4-205ENST00000580315 WASF1Q92558 559 aa28.25■■■□□ 2.11
CDC42EP4-205ENST00000580315 AGO4Q9HCK5 861 aaKnown RBP28.25■■■□□ 2.11
CDC42EP4-205ENST00000580315 SLC9A2Q9UBY0 812 aa28.25■■■□□ 2.11
CDC42EP4-205ENST00000580315 RAPGEFL1Q9UHV5 662 aa28.25■■■□□ 2.11
CDC42EP4-205ENST00000580315 COG5Q9UP83 839 aa28.25■■■□□ 2.11
CDC42EP4-205ENST00000580315 LPXNO60711 386 aa28.24■■■□□ 2.11
CDC42EP4-205ENST00000580315 DEFB103AP81534 67 aa28.24■■■□□ 2.11
CDC42EP4-205ENST00000580315 SETQ01105 290 aaPredicted RBP28.24■■■□□ 2.11
CDC42EP4-205ENST00000580315 GTF3C6Q969F1 213 aa28.24■■■□□ 2.11
CDC42EP4-205ENST00000580315 ZBED2Q9BTP6 218 aa28.24■■■□□ 2.11
CDC42EP4-205ENST00000580315 TCF20Q9UGU0 1960 aaKnown RBP28.24■■■□□ 2.11
CDC42EP4-205ENST00000580315 MYH7BA7E2Y1 1941 aa28.24■■■□□ 2.11
CDC42EP4-205ENST00000580315 C17orf102A2RUQ5 167 aa28.23■■■□□ 2.11
CDC42EP4-205ENST00000580315 FAM86B1E9PN63 330 aa28.23■■■□□ 2.11
CDC42EP4-205ENST00000580315 FAM86B2P0C5J1 330 aa28.23■■■□□ 2.11
CDC42EP4-205ENST00000580315 TCTN1Q2MV58 587 aa28.23■■■□□ 2.11
CDC42EP4-205ENST00000580315 BLIDQ8IZY5 108 aa28.23■■■□□ 2.11
CDC42EP4-205ENST00000580315 NECAB1Q8N987 351 aa28.23■■■□□ 2.11
CDC42EP4-205ENST00000580315 DAGLBQ8NCG7 672 aa28.23■■■□□ 2.11
CDC42EP4-205ENST00000580315 AIFM3Q96NN9 605 aa28.23■■■□□ 2.11
CDC42EP4-205ENST00000580315 UPF2Q9HAU5 1272 aaKnown RBP28.23■■■□□ 2.11
CDC42EP4-205ENST00000580315 TELO2Q9Y4R8 837 aa28.23■■■□□ 2.11
CDC42EP4-205ENST00000580315 GSTTP1A0A1W2PQM5 241 aa28.22■■■□□ 2.11
CDC42EP4-205ENST00000580315 SMIM10L2AP0DMW4 78 aa28.22■■■□□ 2.11
CDC42EP4-205ENST00000580315 SMIM10L2BP0DMW5 78 aa28.22■■■□□ 2.11
CDC42EP4-205ENST00000580315 PTK7Q13308 1070 aa28.22■■■□□ 2.11
CDC42EP4-205ENST00000580315 TRIM50Q86XT4 487 aa28.22■■■□□ 2.11
CDC42EP4-205ENST00000580315 ORC3Q9UBD5 711 aaPredicted RBP28.22■■■□□ 2.11
CDC42EP4-205ENST00000580315 IGLV3-22A0A075B6J6 115 aa28.21■■■□□ 2.11
CDC42EP4-205ENST00000580315 ABHD14A-ACY1A0A1B0GW23 586 aa28.21■■■□□ 2.11
CDC42EP4-205ENST00000580315 GNAT1P11488 350 aa28.21■■■□□ 2.11
CDC42EP4-205ENST00000580315 ITGB3BPQ13352 177 aaPredicted RBP28.21■■■□□ 2.11
CDC42EP4-205ENST00000580315 TRIM71Q2Q1W2 868 aaKnown RBP28.21■■■□□ 2.11
CDC42EP4-205ENST00000580315 TRAF7Q6Q0C0 670 aa28.21■■■□□ 2.11
CDC42EP4-205ENST00000580315 GLG1Q92896 1179 aa28.21■■■□□ 2.11
CDC42EP4-205ENST00000580315 WNT8BQ93098 351 aa28.21■■■□□ 2.11
CDC42EP4-205ENST00000580315 HLA-CQ95604 372 aa28.21■■■□□ 2.11
CDC42EP4-205ENST00000580315 SMARCAD1Q9H4L7 1026 aa28.21■■■□□ 2.11
CDC42EP4-205ENST00000580315 GJB5O95377 273 aa28.2■■■□□ 2.1
CDC42EP4-205ENST00000580315 LARGE1O95461 756 aa28.2■■■□□ 2.1
CDC42EP4-205ENST00000580315 CTDNEP1O95476 244 aa28.2■■■□□ 2.1
CDC42EP4-205ENST00000580315 CIITAP33076 1130 aa28.2■■■□□ 2.1
CDC42EP4-205ENST00000580315 USP11P51784 963 aa28.2■■■□□ 2.1
CDC42EP4-205ENST00000580315 ZNF200P98182 395 aaPredicted RBP28.2■■■□□ 2.1
CDC42EP4-205ENST00000580315 ZNF618Q5T7W0 954 aa28.2■■■□□ 2.1
CDC42EP4-205ENST00000580315 RAD9AQ99638 391 aa28.2■■■□□ 2.1
CDC42EP4-205ENST00000580315 AZI2Q9H6S1 392 aa28.2■■■□□ 2.1
CDC42EP4-205ENST00000580315 ERAP1Q9NZ08 941 aa28.2■■■□□ 2.1
CDC42EP4-205ENST00000580315 LIMCH1Q9UPQ0 1083 aa28.2■■■□□ 2.1
CDC42EP4-205ENST00000580315 PTPRSQ13332 1948 aa28.2■■■□□ 2.1
CDC42EP4-205ENST00000580315 RBAK-RBAKDNI3L0D1 243 aa28.19■■■□□ 2.1
CDC42EP4-205ENST00000580315 IPO5O00410 1097 aaKnown RBP28.19■■■□□ 2.1
CDC42EP4-205ENST00000580315 RBM25P49756 843 aaKnown RBP28.19■■■□□ 2.1
CDC42EP4-205ENST00000580315 ACTR2P61160 394 aa28.19■■■□□ 2.1
CDC42EP4-205ENST00000580315 IKBKEQ14164 716 aa28.19■■■□□ 2.1
CDC42EP4-205ENST00000580315 PRR16Q569H4 304 aa28.19■■■□□ 2.1
CDC42EP4-205ENST00000580315 ATP6V0A1Q93050 837 aa28.19■■■□□ 2.1
CDC42EP4-205ENST00000580315 ZNF577Q9BSK1 485 aa28.19■■■□□ 2.1
CDC42EP4-205ENST00000580315 RNPEPQ9H4A4 650 aa28.19■■■□□ 2.1
CDC42EP4-205ENST00000580315 TBC1D22BQ9NU19 505 aa28.19■■■□□ 2.1
CDC42EP4-205ENST00000580315 KCNJ14Q9UNX9 436 aa28.19■■■□□ 2.1
CDC42EP4-205ENST00000580315 EMSYQ7Z589 1322 aa28.18■■■□□ 2.1
CDC42EP4-205ENST00000580315 EFCAB14O75071 495 aa28.18■■■□□ 2.1
CDC42EP4-205ENST00000580315 MBTPS1Q14703 1052 aa28.18■■■□□ 2.1
CDC42EP4-205ENST00000580315 KRT25Q7Z3Z0 450 aa28.18■■■□□ 2.1
CDC42EP4-205ENST00000580315 TBCKQ8TEA7 893 aa28.18■■■□□ 2.1
CDC42EP4-205ENST00000580315 GDPD5Q8WTR4 605 aa28.18■■■□□ 2.1
CDC42EP4-205ENST00000580315 PHF20Q9BVI0 1012 aa28.18■■■□□ 2.1
CDC42EP4-205ENST00000580315 LMCD1Q9NZU5 365 aa28.18■■■□□ 2.1
CDC42EP4-205ENST00000580315 TCEAL9Q9UHQ7 104 aa28.18■■■□□ 2.1
CDC42EP4-205ENST00000580315 HOXC8P31273 242 aa28.17■■■□□ 2.1
CDC42EP4-205ENST00000580315 HIC1Q14526 733 aa28.17■■■□□ 2.1
CDC42EP4-205ENST00000580315 SERINC5Q86VE9 423 aa28.17■■■□□ 2.1
CDC42EP4-205ENST00000580315 TNPO1Q92973 898 aaKnown RBP28.17■■■□□ 2.1
CDC42EP4-205ENST00000580315 C1QTNF1Q9BXJ1 281 aa28.17■■■□□ 2.1
CDC42EP4-205ENST00000580315 SETD4Q9NVD3 440 aa28.17■■■□□ 2.1
CDC42EP4-205ENST00000580315 NRCAMQ92823 1304 aa28.17■■■□□ 2.1
CDC42EP4-205ENST00000580315 DDX39AO00148 427 aaKnown RBP28.16■■■□□ 2.1
CDC42EP4-205ENST00000580315 LGR5O75473 907 aa28.16■■■□□ 2.1
CDC42EP4-205ENST00000580315 ERVK-21P61565 698 aa28.16■■■□□ 2.1
CDC42EP4-205ENST00000580315 NONOQ15233 471 aaKnown RBP eCLIP28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms