RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 MEIS2O14770 477 aa15.3■□□□□ 0.04
TRAF4-214ENST00000580073 GRIK4Q16099 956 aa15.3■□□□□ 0.04
TRAF4-214ENST00000580073 CSPP1Q1MSJ5 1256 aa15.3■□□□□ 0.04
TRAF4-214ENST00000580073 ADCK5Q3MIX3 580 aa15.3■□□□□ 0.04
TRAF4-214ENST00000580073 IER5Q5VY09 327 aa15.3■□□□□ 0.04
TRAF4-214ENST00000580073 SYNE3Q6ZMZ3 975 aa15.3■□□□□ 0.04
TRAF4-214ENST00000580073 NEK9Q8TD19 979 aa15.3■□□□□ 0.04
TRAF4-214ENST00000580073 EVPLQ92817 2033 aa15.3■□□□□ 0.04
TRAF4-214ENST00000580073 POP1Q99575 1024 aaKnown RBP15.3■□□□□ 0.04
TRAF4-214ENST00000580073 MYL10Q9BUA6 226 aa15.3■□□□□ 0.04
TRAF4-214ENST00000580073 SQORQ9Y6N5 450 aa15.3■□□□□ 0.04
TRAF4-214ENST00000580073 FNDC1Q4ZHG4 1894 aaPredicted RBP15.29■□□□□ 0.04
TRAF4-214ENST00000580073 GRXCR2A6NFK2 248 aa15.29■□□□□ 0.04
TRAF4-214ENST00000580073 PRR33A8MZF0 331 aa15.29■□□□□ 0.04
TRAF4-214ENST00000580073 hCG_1984214I3L0E3 225 aa15.29■□□□□ 0.04
TRAF4-214ENST00000580073 SH2B2O14492 632 aaPredicted RBP15.29■□□□□ 0.04
TRAF4-214ENST00000580073 GHRP10912 638 aa15.29■□□□□ 0.04
TRAF4-214ENST00000580073 KCNA2P16389 499 aa15.29■□□□□ 0.04
TRAF4-214ENST00000580073 HSPA4P34932 840 aa15.29■□□□□ 0.04
TRAF4-214ENST00000580073 RNF20Q5VTR2 975 aa15.29■□□□□ 0.04
TRAF4-214ENST00000580073 PPP1R18Q6NYC8 613 aa15.29■□□□□ 0.04
TRAF4-214ENST00000580073 EP400NLQ6ZTU2 488 aa15.29■□□□□ 0.04
TRAF4-214ENST00000580073 ZNF713Q8N859 430 aaPredicted RBP15.29■□□□□ 0.04
TRAF4-214ENST00000580073 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.29■□□□□ 0.04
TRAF4-214ENST00000580073 SDF4Q9BRK5 362 aa15.29■□□□□ 0.04
TRAF4-214ENST00000580073 PLVAPQ9BX97 442 aa15.29■□□□□ 0.04
TRAF4-214ENST00000580073 JPH1Q9HDC5 661 aaPredicted RBP15.29■□□□□ 0.04
TRAF4-214ENST00000580073 RAPGEFL1Q9UHV5 662 aa15.29■□□□□ 0.04
TRAF4-214ENST00000580073 PLXNA4Q9HCM2 1894 aa15.29■□□□□ 0.04
TRAF4-214ENST00000580073 MBLAC1A4D2B0 266 aaPredicted RBP15.28■□□□□ 0.04
TRAF4-214ENST00000580073 IL9P15248 144 aa15.28■□□□□ 0.04
TRAF4-214ENST00000580073 MRPS6P82932 125 aaKnown RBP15.28■□□□□ 0.04
TRAF4-214ENST00000580073 MGAT3Q09327 533 aa15.28■□□□□ 0.04
TRAF4-214ENST00000580073 BTG3Q14201 252 aaPredicted RBP15.28■□□□□ 0.04
TRAF4-214ENST00000580073 TSGA10IPQ3SY00 556 aa15.28■□□□□ 0.04
TRAF4-214ENST00000580073 NAALADL2Q58DX5 795 aa15.28■□□□□ 0.04
TRAF4-214ENST00000580073 TCEAL5Q5H9L2 206 aa15.28■□□□□ 0.04
TRAF4-214ENST00000580073 GLT8D2Q9H1C3 349 aa15.28■□□□□ 0.04
TRAF4-214ENST00000580073 JADE2Q9NQC1 790 aa15.28■□□□□ 0.04
TRAF4-214ENST00000580073 RBM28Q9NW13 759 aaKnown RBP15.28■□□□□ 0.04
TRAF4-214ENST00000580073 CLDND1Q9NY35 253 aa15.28■□□□□ 0.04
TRAF4-214ENST00000580073 SNX14Q9Y5W7 946 aa15.28■□□□□ 0.04
TRAF4-214ENST00000580073 UBIAD1Q9Y5Z9 338 aa15.28■□□□□ 0.04
TRAF4-214ENST00000580073 NFASCO94856 1347 aa15.27■□□□□ 0.04
TRAF4-214ENST00000580073 FSD2A1L4K1 749 aa15.27■□□□□ 0.04
TRAF4-214ENST00000580073 REC8O95072 547 aa15.27■□□□□ 0.04
TRAF4-214ENST00000580073 PLEKHA8P1O95397 391 aa15.27■□□□□ 0.04
TRAF4-214ENST00000580073 FOSP01100 380 aaPredicted RBP15.27■□□□□ 0.04
TRAF4-214ENST00000580073 CHRNA1P02708 482 aa15.27■□□□□ 0.04
TRAF4-214ENST00000580073 STAG3L1P0CL83 205 aa15.27■□□□□ 0.04
TRAF4-214ENST00000580073 MARK3P27448 753 aa15.27■□□□□ 0.04
TRAF4-214ENST00000580073 SLC26A2P50443 739 aa15.27■□□□□ 0.04
TRAF4-214ENST00000580073 LPIN1Q14693 890 aa15.27■□□□□ 0.04
TRAF4-214ENST00000580073 COL19A1Q14993 1142 aa15.27■□□□□ 0.04
TRAF4-214ENST00000580073 FBXO47Q5MNV8 452 aa15.27■□□□□ 0.04
TRAF4-214ENST00000580073 ODR4Q5SWX8 454 aa15.27■□□□□ 0.04
TRAF4-214ENST00000580073 HEATR3Q7Z4Q2 680 aa15.27■□□□□ 0.04
TRAF4-214ENST00000580073 CLP1Q92989 425 aaKnown RBP15.27■□□□□ 0.04
TRAF4-214ENST00000580073 UPF3BQ9BZI7 483 aaKnown RBP15.27■□□□□ 0.04
TRAF4-214ENST00000580073 BCAS3Q9H6U6 928 aa15.27■□□□□ 0.04
TRAF4-214ENST00000580073 SLC9A2Q9UBY0 812 aa15.27■□□□□ 0.04
TRAF4-214ENST00000580073 TRPC6Q9Y210 931 aa15.27■□□□□ 0.04
TRAF4-214ENST00000580073 CDY2AQ9Y6F7 541 aa15.27■□□□□ 0.04
TRAF4-214ENST00000580073 H3BQ06 376 aaPredicted RBP15.26■□□□□ 0.03
TRAF4-214ENST00000580073 MMP1P03956 469 aa15.26■□□□□ 0.03
TRAF4-214ENST00000580073 CPA1P15085 419 aa15.26■□□□□ 0.03
TRAF4-214ENST00000580073 ITGB5P18084 799 aa15.26■□□□□ 0.03
TRAF4-214ENST00000580073 BMPR1AP36894 532 aa15.26■□□□□ 0.03
TRAF4-214ENST00000580073 RUFY4Q6ZNE9 571 aa15.26■□□□□ 0.03
TRAF4-214ENST00000580073 TMTC3Q6ZXV5 915 aa15.26■□□□□ 0.03
TRAF4-214ENST00000580073 MICU3Q86XE3 530 aa15.26■□□□□ 0.03
TRAF4-214ENST00000580073 NPAS4Q8IUM7 802 aa15.26■□□□□ 0.03
TRAF4-214ENST00000580073 CMTR2Q8IYT2 770 aaKnown RBP15.26■□□□□ 0.03
TRAF4-214ENST00000580073 SRBD1Q8N5C6 995 aaKnown RBP15.26■□□□□ 0.03
TRAF4-214ENST00000580073 DNAJB3Q8WWF6 145 aa15.26■□□□□ 0.03
TRAF4-214ENST00000580073 P2RX5Q93086 422 aa15.26■□□□□ 0.03
TRAF4-214ENST00000580073 RC3H2Q9HBD1 1191 aaKnown RBP15.26■□□□□ 0.03
TRAF4-214ENST00000580073 PCDHA6Q9UN73 950 aa15.26■□□□□ 0.03
TRAF4-214ENST00000580073 PCDHA8Q9Y5H6 950 aa15.26■□□□□ 0.03
TRAF4-214ENST00000580073 TRPV2Q9Y5S1 764 aa15.26■□□□□ 0.03
TRAF4-214ENST00000580073 GSTTP1A0A1W2PQM5 241 aa15.25■□□□□ 0.03
TRAF4-214ENST00000580073 DCXO43602 365 aa15.25■□□□□ 0.03
TRAF4-214ENST00000580073 ATP9AO75110 1047 aa15.25■□□□□ 0.03
TRAF4-214ENST00000580073 ADCY7P51828 1080 aa15.25■□□□□ 0.03
TRAF4-214ENST00000580073 NAPAP54920 295 aa15.25■□□□□ 0.03
TRAF4-214ENST00000580073 IGBP1P78318 339 aa15.25■□□□□ 0.03
TRAF4-214ENST00000580073 PAK2Q13177 524 aa15.25■□□□□ 0.03
TRAF4-214ENST00000580073 AP3B2Q13367 1082 aa15.25■□□□□ 0.03
TRAF4-214ENST00000580073 UBE2SQ16763 222 aa15.25■□□□□ 0.03
TRAF4-214ENST00000580073 SGMS1Q86VZ5 419 aa15.25■□□□□ 0.03
TRAF4-214ENST00000580073 ADHFE1Q8IWW8 467 aa15.25■□□□□ 0.03
TRAF4-214ENST00000580073 FANCBQ8NB91 859 aa15.25■□□□□ 0.03
TRAF4-214ENST00000580073 PKD2L1Q9P0L9 805 aa15.25■□□□□ 0.03
TRAF4-214ENST00000580073 TCEAL9Q9UHQ7 104 aa15.25■□□□□ 0.03
TRAF4-214ENST00000580073 LRFN2Q9ULH4 789 aa15.25■□□□□ 0.03
TRAF4-214ENST00000580073 MYO7AQ13402 2215 aa15.25■□□□□ 0.03
TRAF4-214ENST00000580073 COL1A2P08123 1366 aa15.24■□□□□ 0.03
TRAF4-214ENST00000580073 FAM86C2PA6NEL3 165 aa15.24■□□□□ 0.03
TRAF4-214ENST00000580073 DGKIO75912 1065 aa15.24■□□□□ 0.03
TRAF4-214ENST00000580073 HOXD11P31277 338 aaPredicted RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms