RNA–Protein interactions for RNA: ENST00000579609.5

PPP4R1-213, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-213ENST00000579609 KIFC2Q96AC6 838 aa9.8□□□□□ -0.84
PPP4R1-213ENST00000579609 C12orf42Q96LP6 360 aa9.8□□□□□ -0.84
PPP4R1-213ENST00000579609 PLIN2Q99541 437 aa9.8□□□□□ -0.84
PPP4R1-213ENST00000579609 NUDT12Q9BQG2 462 aa9.8□□□□□ -0.84
PPP4R1-213ENST00000579609 MKNK1Q9BUB5 465 aa9.8□□□□□ -0.84
PPP4R1-213ENST00000579609 CCDC94Q9BW85 323 aaPredicted RBP9.8□□□□□ -0.84
PPP4R1-213ENST00000579609 KCTD10Q9H3F6 313 aa9.8□□□□□ -0.84
PPP4R1-213ENST00000579609 AS3MTQ9HBK9 375 aa9.8□□□□□ -0.84
PPP4R1-213ENST00000579609 SLC39A2Q9NP94 309 aa9.8□□□□□ -0.84
PPP4R1-213ENST00000579609 LUC7LQ9NQ29 371 aaKnown RBP9.8□□□□□ -0.84
PPP4R1-213ENST00000579609 ZNF277Q9NRM2 450 aaPredicted RBP9.8□□□□□ -0.84
PPP4R1-213ENST00000579609 ZNF215Q9UL58 517 aaPredicted RBP9.8□□□□□ -0.84
PPP4R1-213ENST00000579609 MAPK8IP1Q9UQF2 711 aa9.8□□□□□ -0.84
PPP4R1-213ENST00000579609 SIK3Q9Y2K2 1263 aa9.8□□□□□ -0.84
PPP4R1-213ENST00000579609 MRFAP1Q9Y605 127 aa9.8□□□□□ -0.84
PPP4R1-213ENST00000579609 POTEB3A0JP26 581 aa9.79□□□□□ -0.84
PPP4R1-213ENST00000579609 CLRN2A0PK11 232 aa9.79□□□□□ -0.84
PPP4R1-213ENST00000579609 SOWAHDA6NJG2 315 aa9.79□□□□□ -0.84
PPP4R1-213ENST00000579609 PHF20L1A8MW92 1017 aa9.79□□□□□ -0.84
PPP4R1-213ENST00000579609 POTECB2RU33 542 aa9.79□□□□□ -0.84
PPP4R1-213ENST00000579609 FZD9O00144 591 aa9.79□□□□□ -0.84
PPP4R1-213ENST00000579609 CETN3O15182 167 aa9.79□□□□□ -0.84
PPP4R1-213ENST00000579609 MAFGO15525 162 aa9.79□□□□□ -0.84
PPP4R1-213ENST00000579609 MED24O75448 989 aa9.79□□□□□ -0.84
PPP4R1-213ENST00000579609 KRT18P05783 430 aaKnown RBP9.79□□□□□ -0.84
PPP4R1-213ENST00000579609 SCP2P22307 547 aa9.79□□□□□ -0.84
PPP4R1-213ENST00000579609 ZNF131P52739 623 aa9.79□□□□□ -0.84
PPP4R1-213ENST00000579609 ERVK-24P63145 666 aa9.79□□□□□ -0.84
PPP4R1-213ENST00000579609 FAM193AP78312 1265 aa9.79□□□□□ -0.84
PPP4R1-213ENST00000579609 GIT2Q14161 759 aa9.79□□□□□ -0.84
PPP4R1-213ENST00000579609 WHAMMP3Q1A5X7 153 aa9.79□□□□□ -0.84
PPP4R1-213ENST00000579609 POTEBQ6S5H4 581 aa9.79□□□□□ -0.84
PPP4R1-213ENST00000579609 OTOP1Q7RTM1 612 aa9.79□□□□□ -0.84
PPP4R1-213ENST00000579609 DYMQ7RTS9 669 aa9.79□□□□□ -0.84
PPP4R1-213ENST00000579609 LDHDQ86WU2 507 aa9.79□□□□□ -0.84
PPP4R1-213ENST00000579609 APOBEC3FQ8IUX4 373 aaKnown RBP9.79□□□□□ -0.84
PPP4R1-213ENST00000579609 GPR161Q8N6U8 529 aaKnown RBP9.79□□□□□ -0.84
PPP4R1-213ENST00000579609 MNS1Q8NEH6 495 aa9.79□□□□□ -0.84
PPP4R1-213ENST00000579609 UBE2Q2Q8WVN8 375 aa9.79□□□□□ -0.84
PPP4R1-213ENST00000579609 UBXN4Q92575 508 aa9.79□□□□□ -0.84
PPP4R1-213ENST00000579609 TEPSINQ96N21 525 aa9.79□□□□□ -0.84
PPP4R1-213ENST00000579609 NACC1Q96RE7 527 aa9.79□□□□□ -0.84
PPP4R1-213ENST00000579609 SLF1Q9BQI6 1058 aa9.79□□□□□ -0.84
PPP4R1-213ENST00000579609 VEZTQ9HBM0 779 aa9.79□□□□□ -0.84
PPP4R1-213ENST00000579609 TYW1Q9NV66 732 aaKnown RBP9.79□□□□□ -0.84
PPP4R1-213ENST00000579609 CEP72Q9P209 647 aa9.79□□□□□ -0.84
PPP4R1-213ENST00000579609 ZNF112Q9UJU3 913 aa9.79□□□□□ -0.84
PPP4R1-213ENST00000579609 CDC23Q9UJX2 597 aa9.79□□□□□ -0.84
PPP4R1-213ENST00000579609 PHIPQ8WWQ0 1821 aa9.78□□□□□ -0.84
PPP4R1-213ENST00000579609 CTAGE9A4FU28 777 aa9.78□□□□□ -0.84
PPP4R1-213ENST00000579609 B4DLN1 442 aa9.78□□□□□ -0.84
PPP4R1-213ENST00000579609 C19orf81C9J6K1 198 aa9.78□□□□□ -0.84
PPP4R1-213ENST00000579609 E9PMD0 336 aa9.78□□□□□ -0.84
PPP4R1-213ENST00000579609 ATP2A1O14983 1001 aa9.78□□□□□ -0.84
PPP4R1-213ENST00000579609 RAD21O60216 631 aa9.78□□□□□ -0.84
PPP4R1-213ENST00000579609 EVI5O60447 810 aa9.78□□□□□ -0.84
PPP4R1-213ENST00000579609 TBCAO75347 108 aaKnown RBP9.78□□□□□ -0.84
PPP4R1-213ENST00000579609 TADA3O75528 432 aa9.78□□□□□ -0.84
PPP4R1-213ENST00000579609 STAM2O75886 525 aa9.78□□□□□ -0.84
PPP4R1-213ENST00000579609 OSBPP22059 807 aa9.78□□□□□ -0.84
PPP4R1-213ENST00000579609 GUCY2CP25092 1073 aa9.78□□□□□ -0.84
PPP4R1-213ENST00000579609 ABCD1P33897 745 aa9.78□□□□□ -0.84
PPP4R1-213ENST00000579609 ECE1P42892 770 aa9.78□□□□□ -0.84
PPP4R1-213ENST00000579609 RASA3Q14644 834 aa9.78□□□□□ -0.84
PPP4R1-213ENST00000579609 ECM1Q16610 540 aa9.78□□□□□ -0.84
PPP4R1-213ENST00000579609 KNOP1Q1ED39 458 aaKnown RBP9.78□□□□□ -0.84
PPP4R1-213ENST00000579609 TKFCQ3LXA3 575 aa9.78□□□□□ -0.84
PPP4R1-213ENST00000579609 USH1GQ495M9 461 aa9.78□□□□□ -0.84
PPP4R1-213ENST00000579609 GLIPR1L2Q4G1C9 344 aa9.78□□□□□ -0.84
PPP4R1-213ENST00000579609 HERC4Q5GLZ8 1057 aaPredicted RBP9.78□□□□□ -0.84
PPP4R1-213ENST00000579609 C10orf76Q5T2E6 689 aa9.78□□□□□ -0.84
PPP4R1-213ENST00000579609 LRCH2Q5VUJ6 765 aa9.78□□□□□ -0.84
PPP4R1-213ENST00000579609 PCNX4Q63HM2 1172 aa9.78□□□□□ -0.84
PPP4R1-213ENST00000579609 NCAPH2Q6IBW4 605 aa9.78□□□□□ -0.84
PPP4R1-213ENST00000579609 WDR59Q6PJI9 974 aa9.78□□□□□ -0.84
PPP4R1-213ENST00000579609 MSL3Q8N5Y2 521 aaKnown RBP9.78□□□□□ -0.84
PPP4R1-213ENST00000579609 CCDC155Q8N6L0 562 aa9.78□□□□□ -0.84
PPP4R1-213ENST00000579609 NEK11Q8NG66 645 aa9.78□□□□□ -0.84
PPP4R1-213ENST00000579609 ACER1Q8TDN7 264 aa9.78□□□□□ -0.84
PPP4R1-213ENST00000579609 CPLX3Q8WVH0 158 aa9.78□□□□□ -0.84
PPP4R1-213ENST00000579609 RABGGTAQ92696 567 aa9.78□□□□□ -0.84
PPP4R1-213ENST00000579609 VTI1AQ96AJ9 217 aa9.78□□□□□ -0.84
PPP4R1-213ENST00000579609 P2RX7Q99572 595 aaKnown RBP9.78□□□□□ -0.84
PPP4R1-213ENST00000579609 NAPGQ99747 312 aaPredicted RBP9.78□□□□□ -0.84
PPP4R1-213ENST00000579609 EIF2AK1Q9BQI3 630 aaKnown RBP9.78□□□□□ -0.84
PPP4R1-213ENST00000579609 MXRA8Q9BRK3 442 aa9.78□□□□□ -0.84
PPP4R1-213ENST00000579609 TEKT3Q9BXF9 490 aa9.78□□□□□ -0.84
PPP4R1-213ENST00000579609 ZNF341Q9BYN7 854 aa9.78□□□□□ -0.84
PPP4R1-213ENST00000579609 TMEM39BQ9GZU3 492 aa9.78□□□□□ -0.84
PPP4R1-213ENST00000579609 SLC38A10Q9HBR0 1119 aa9.78□□□□□ -0.84
PPP4R1-213ENST00000579609 PLCB1Q9NQ66 1216 aa9.78□□□□□ -0.84
PPP4R1-213ENST00000579609 TBC1D22BQ9NU19 505 aa9.78□□□□□ -0.84
PPP4R1-213ENST00000579609 DBR1Q9UK59 544 aaKnown RBP9.78□□□□□ -0.84
PPP4R1-213ENST00000579609 BZW2Q9Y6E2 419 aaKnown RBP9.78□□□□□ -0.84
PPP4R1-213ENST00000579609 RBAK-RBAKDNI3L0D1 243 aa9.77□□□□□ -0.85
PPP4R1-213ENST00000579609 NFKBIEO00221 500 aa9.77□□□□□ -0.85
PPP4R1-213ENST00000579609 TRAF5O00463 557 aa9.77□□□□□ -0.85
PPP4R1-213ENST00000579609 PPP1R12BO60237 982 aaPredicted RBP9.77□□□□□ -0.85
PPP4R1-213ENST00000579609 USO1O60763 962 aaKnown RBP9.77□□□□□ -0.85
PPP4R1-213ENST00000579609 DKC1O60832 514 aaKnown RBP eCLIP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms