RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 HAND2P61296 217 aa15.33■□□□□ 0.04
CDK5RAP3-213ENST00000579605 PUM1Q14671 1186 aaKnown RBP eCLIP15.33■□□□□ 0.046e-7■□□□□ 10.6
CDK5RAP3-213ENST00000579605 ANGPT1Q15389 498 aa15.33■□□□□ 0.04
CDK5RAP3-213ENST00000579605 TSHZ1Q6ZSZ6 1077 aa15.33■□□□□ 0.04
CDK5RAP3-213ENST00000579605 RSPH3Q86UC2 560 aa15.33■□□□□ 0.04
CDK5RAP3-213ENST00000579605 DNAJB3Q8WWF6 145 aa15.33■□□□□ 0.04
CDK5RAP3-213ENST00000579605 CDCA3Q99618 268 aaPredicted RBP15.33■□□□□ 0.04
CDK5RAP3-213ENST00000579605 HINFPQ9BQA5 517 aa15.33■□□□□ 0.04
CDK5RAP3-213ENST00000579605 TMEM260Q9NX78 707 aa15.33■□□□□ 0.04
CDK5RAP3-213ENST00000579605 LIMD1Q9UGP4 676 aa15.33■□□□□ 0.04
CDK5RAP3-213ENST00000579605 ZNF215Q9UL58 517 aaPredicted RBP15.33■□□□□ 0.04
CDK5RAP3-213ENST00000579605 LRFN2Q9ULH4 789 aa15.33■□□□□ 0.04
CDK5RAP3-213ENST00000579605 DNAH14Q0VDD8 3507 aa15.32■□□□□ 0.04
CDK5RAP3-213ENST00000579605 FGF18O76093 207 aa15.32■□□□□ 0.04
CDK5RAP3-213ENST00000579605 CCND2P30279 289 aa15.32■□□□□ 0.04
CDK5RAP3-213ENST00000579605 HSD17B4P51659 736 aa15.32■□□□□ 0.04
CDK5RAP3-213ENST00000579605 THNSL1Q8IYQ7 743 aa15.32■□□□□ 0.04
CDK5RAP3-213ENST00000579605 GPR20Q99678 358 aa15.32■□□□□ 0.04
CDK5RAP3-213ENST00000579605 POMKQ9H5K3 350 aa15.32■□□□□ 0.04
CDK5RAP3-213ENST00000579605 CACNA1BQ00975 2339 aa15.32■□□□□ 0.04
CDK5RAP3-213ENST00000579605 GVINP1Q7Z2Y8 2422 aa15.31■□□□□ 0.04
CDK5RAP3-213ENST00000579605 OPLAHO14841 1288 aa15.31■□□□□ 0.04
CDK5RAP3-213ENST00000579605 LMNAP02545 664 aaKnown RBP15.31■□□□□ 0.04
CDK5RAP3-213ENST00000579605 FGAP02671 866 aa15.31■□□□□ 0.04
CDK5RAP3-213ENST00000579605 WEE2P0C1S8 567 aa15.31■□□□□ 0.04
CDK5RAP3-213ENST00000579605 UBE3AQ05086 875 aa15.31■□□□□ 0.04
CDK5RAP3-213ENST00000579605 TAF2Q6P1X5 1199 aa15.31■□□□□ 0.04
CDK5RAP3-213ENST00000579605 STOX1Q6ZVD7 989 aa15.31■□□□□ 0.04
CDK5RAP3-213ENST00000579605 FCHSD1Q86WN1 690 aa15.31■□□□□ 0.04
CDK5RAP3-213ENST00000579605 CRIPAKQ8N1N5 446 aa15.31■□□□□ 0.04
CDK5RAP3-213ENST00000579605 ZBTB10Q96DT7 871 aa15.31■□□□□ 0.04
CDK5RAP3-213ENST00000579605 JMJD4Q9H9V9 463 aa15.31■□□□□ 0.04
CDK5RAP3-213ENST00000579605 RCAN3Q9UKA8 241 aa15.31■□□□□ 0.04
CDK5RAP3-213ENST00000579605 R4GN57 208 aa15.31■□□□□ 0.04
CDK5RAP3-213ENST00000579605 NRCAMQ92823 1304 aa15.31■□□□□ 0.04
CDK5RAP3-213ENST00000579605 MYH7BA7E2Y1 1941 aa15.31■□□□□ 0.04
CDK5RAP3-213ENST00000579605 KIAA1217Q5T5P2 1943 aa15.31■□□□□ 0.04
CDK5RAP3-213ENST00000579605 FSD2A1L4K1 749 aa15.3■□□□□ 0.04
CDK5RAP3-213ENST00000579605 SCG2P13521 617 aa15.3■□□□□ 0.04
CDK5RAP3-213ENST00000579605 IGBP1P78318 339 aa15.3■□□□□ 0.04
CDK5RAP3-213ENST00000579605 CWF19L1Q69YN2 538 aaKnown RBP15.3■□□□□ 0.04
CDK5RAP3-213ENST00000579605 TMEM184AQ6ZMB5 413 aa15.3■□□□□ 0.04
CDK5RAP3-213ENST00000579605 DTWD2Q8NBA8 298 aa15.3■□□□□ 0.04
CDK5RAP3-213ENST00000579605 PNMA1Q8ND90 353 aa15.3■□□□□ 0.04
CDK5RAP3-213ENST00000579605 FAM49AQ9H0Q0 323 aaPredicted RBP15.3■□□□□ 0.04
CDK5RAP3-213ENST00000579605 ENTPD7Q9NQZ7 604 aa15.3■□□□□ 0.04
CDK5RAP3-213ENST00000579605 AAASQ9NRG9 546 aa15.3■□□□□ 0.04
CDK5RAP3-213ENST00000579605 RTEL1Q9NZ71 1219 aa15.3■□□□□ 0.04
CDK5RAP3-213ENST00000579605 HCSTQ9UBK5 93 aa15.3■□□□□ 0.04
CDK5RAP3-213ENST00000579605 TBKBP1A7MCY6 615 aa15.29■□□□□ 0.04
CDK5RAP3-213ENST00000579605 HIDE1A8MVS5 230 aa15.29■□□□□ 0.04
CDK5RAP3-213ENST00000579605 STK25O00506 426 aa15.29■□□□□ 0.04
CDK5RAP3-213ENST00000579605 HOXB8P17481 243 aaPredicted RBP15.29■□□□□ 0.04
CDK5RAP3-213ENST00000579605 MARK3P27448 753 aa15.29■□□□□ 0.04
CDK5RAP3-213ENST00000579605 MRPS6P82932 125 aaKnown RBP15.29■□□□□ 0.04
CDK5RAP3-213ENST00000579605 TMEM62Q0P6H9 643 aa15.29■□□□□ 0.04
CDK5RAP3-213ENST00000579605 PPFIA1Q13136 1202 aa15.29■□□□□ 0.04
CDK5RAP3-213ENST00000579605 KCNC3Q14003 757 aa15.29■□□□□ 0.04
CDK5RAP3-213ENST00000579605 NEDD9Q14511 834 aa15.29■□□□□ 0.04
CDK5RAP3-213ENST00000579605 ALX1Q15699 326 aa15.29■□□□□ 0.04
CDK5RAP3-213ENST00000579605 CES5AQ6NT32 575 aa15.29■□□□□ 0.04
CDK5RAP3-213ENST00000579605 METTL7BQ6UX53 244 aa15.29■□□□□ 0.04
CDK5RAP3-213ENST00000579605 MFSD6Q6ZSS7 791 aa15.29■□□□□ 0.04
CDK5RAP3-213ENST00000579605 CCDC105Q8IYK2 499 aa15.29■□□□□ 0.04
CDK5RAP3-213ENST00000579605 TCF25Q9BQ70 676 aa15.29■□□□□ 0.04
CDK5RAP3-213ENST00000579605 AMNQ9BXJ7 453 aa15.29■□□□□ 0.04
CDK5RAP3-213ENST00000579605 FTHL17Q9BXU8 183 aa15.29■□□□□ 0.04
CDK5RAP3-213ENST00000579605 PADI3Q9ULW8 664 aa15.29■□□□□ 0.04
CDK5RAP3-213ENST00000579605 PCDHB7Q9Y5E2 793 aa15.29■□□□□ 0.04
CDK5RAP3-213ENST00000579605 ZFHX4Q86UP3 3567 aa15.29■□□□□ 0.04
CDK5RAP3-213ENST00000579605 TRIM6-TRIM34B2RNG4 842 aa15.28■□□□□ 0.04
CDK5RAP3-213ENST00000579605 FSCN2O14926 492 aa15.28■□□□□ 0.04
CDK5RAP3-213ENST00000579605 AOC1P19801 751 aa15.28■□□□□ 0.04
CDK5RAP3-213ENST00000579605 GRIK4Q16099 956 aa15.28■□□□□ 0.04
CDK5RAP3-213ENST00000579605 GNPTABQ3T906 1256 aa15.28■□□□□ 0.04
CDK5RAP3-213ENST00000579605 TPRNQ4KMQ1 711 aa15.28■□□□□ 0.04
CDK5RAP3-213ENST00000579605 PDE12Q6L8Q7 609 aaKnown RBP15.28■□□□□ 0.04
CDK5RAP3-213ENST00000579605 DCLK2Q8N568 766 aa15.28■□□□□ 0.04
CDK5RAP3-213ENST00000579605 COLGALT1Q8NBJ5 622 aa15.28■□□□□ 0.04
CDK5RAP3-213ENST00000579605 CYP2W1Q8TAV3 490 aa15.28■□□□□ 0.04
CDK5RAP3-213ENST00000579605 KAT14Q9H8E8 782 aa15.28■□□□□ 0.04
CDK5RAP3-213ENST00000579605 TYW1Q9NV66 732 aaKnown RBP15.28■□□□□ 0.04
CDK5RAP3-213ENST00000579605 TUBE1Q9UJT0 475 aa15.28■□□□□ 0.04
CDK5RAP3-213ENST00000579605 PCDHA1Q9Y5I3 950 aa15.28■□□□□ 0.04
CDK5RAP3-213ENST00000579605 SPATA31C2B4DYI2 1134 aa15.27■□□□□ 0.04
CDK5RAP3-213ENST00000579605 NPR3P17342 541 aa15.27■□□□□ 0.04
CDK5RAP3-213ENST00000579605 PAK2Q13177 524 aa15.27■□□□□ 0.04
CDK5RAP3-213ENST00000579605 TMEM266Q2M3C6 531 aa15.27■□□□□ 0.04
CDK5RAP3-213ENST00000579605 ASPRV1Q53RT3 343 aa15.27■□□□□ 0.04
CDK5RAP3-213ENST00000579605 FAM102BQ5T8I3 360 aa15.27■□□□□ 0.04
CDK5RAP3-213ENST00000579605 TDRD5Q8NAT2 981 aaKnown RBP15.27■□□□□ 0.04
CDK5RAP3-213ENST00000579605 PI4K2BQ8TCG2 481 aa15.27■□□□□ 0.04
CDK5RAP3-213ENST00000579605 RIN2Q8WYP3 895 aaPredicted RBP15.27■□□□□ 0.04
CDK5RAP3-213ENST00000579605 ADAM7Q9H2U9 754 aa15.27■□□□□ 0.04
CDK5RAP3-213ENST00000579605 PUF60Q9UHX1 559 aaKnown RBP15.27■□□□□ 0.04
CDK5RAP3-213ENST00000579605 FBXL21Q9UKT6 434 aa15.27■□□□□ 0.04
CDK5RAP3-213ENST00000579605 TTC3P53804 2025 aa15.26■□□□□ 0.03
CDK5RAP3-213ENST00000579605 GCOM1H8Y6P7 765 aaPredicted RBP15.26■□□□□ 0.03
CDK5RAP3-213ENST00000579605 PPP1R11O60927 126 aaPredicted RBP15.26■□□□□ 0.03
CDK5RAP3-213ENST00000579605 PARP1P09874 1014 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms