RNA–Protein interactions for RNA: ENST00000579308.1

CSNK1D-210, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-210ENST00000579308 CCDC69A6NI79 296 aa12.22□□□□□ -0.45
CSNK1D-210ENST00000579308 H3BQ06 376 aaPredicted RBP12.22□□□□□ -0.45
CSNK1D-210ENST00000579308 CALM1P0DP23 149 aa12.22□□□□□ -0.45
CSNK1D-210ENST00000579308 CALM2P0DP24 149 aa12.22□□□□□ -0.45
CSNK1D-210ENST00000579308 CALM3P0DP25 149 aa12.22□□□□□ -0.45
CSNK1D-210ENST00000579308 MARK3P27448 753 aa12.22□□□□□ -0.45
CSNK1D-210ENST00000579308 LTBRP36941 435 aa12.22□□□□□ -0.45
CSNK1D-210ENST00000579308 MTMR1Q13613 665 aa12.22□□□□□ -0.45
CSNK1D-210ENST00000579308 POTEBQ6S5H4 581 aa12.22□□□□□ -0.45
CSNK1D-210ENST00000579308 NFXL1Q6ZNB6 911 aa12.22□□□□□ -0.45
CSNK1D-210ENST00000579308 TMTC3Q6ZXV5 915 aa12.22□□□□□ -0.45
CSNK1D-210ENST00000579308 RSPH3Q86UC2 560 aa12.22□□□□□ -0.45
CSNK1D-210ENST00000579308 RTN4RL1Q86UN2 441 aaPredicted RBP12.22□□□□□ -0.45
CSNK1D-210ENST00000579308 SGMS1Q86VZ5 419 aa12.22□□□□□ -0.45
CSNK1D-210ENST00000579308 DNAJB3Q8WWF6 145 aa12.22□□□□□ -0.45
CSNK1D-210ENST00000579308 NSUN3Q9H649 340 aaKnown RBP12.22□□□□□ -0.45
CSNK1D-210ENST00000579308 AGO3Q9H9G7 860 aaKnown RBP12.22□□□□□ -0.45
CSNK1D-210ENST00000579308 TUBE1Q9UJT0 475 aa12.22□□□□□ -0.45
CSNK1D-210ENST00000579308 RRN3P2A6NIE6 340 aa12.21□□□□□ -0.45
CSNK1D-210ENST00000579308 C19orf67A6NJJ6 358 aa12.21□□□□□ -0.45
CSNK1D-210ENST00000579308 GRM6O15303 877 aa12.21□□□□□ -0.45
CSNK1D-210ENST00000579308 NCK2O43639 380 aa12.21□□□□□ -0.45
CSNK1D-210ENST00000579308 DGKIO75912 1065 aa12.21□□□□□ -0.45
CSNK1D-210ENST00000579308 INSRRP14616 1297 aa12.21□□□□□ -0.45
CSNK1D-210ENST00000579308 FUT2Q10981 343 aa12.21□□□□□ -0.45
CSNK1D-210ENST00000579308 CAMK1Q14012 370 aa12.21□□□□□ -0.45
CSNK1D-210ENST00000579308 CREB3L3Q68CJ9 461 aa12.21□□□□□ -0.45
CSNK1D-210ENST00000579308 TSHZ1Q6ZSZ6 1077 aa12.21□□□□□ -0.45
CSNK1D-210ENST00000579308 TEX2Q8IWB9 1127 aa12.21□□□□□ -0.45
CSNK1D-210ENST00000579308 CCDC82Q8N4S0 544 aa12.21□□□□□ -0.45
CSNK1D-210ENST00000579308 CYP2W1Q8TAV3 490 aa12.21□□□□□ -0.45
CSNK1D-210ENST00000579308 LINC01599Q8WXQ3 324 aa12.21□□□□□ -0.45
CSNK1D-210ENST00000579308 GLG1Q92896 1179 aa12.21□□□□□ -0.45
CSNK1D-210ENST00000579308 ZBTB10Q96DT7 871 aa12.21□□□□□ -0.45
CSNK1D-210ENST00000579308 ESYT1Q9BSJ8 1104 aa12.21□□□□□ -0.45
CSNK1D-210ENST00000579308 KCNH7Q9NS40 1196 aa12.21□□□□□ -0.45
CSNK1D-210ENST00000579308 SLC12A7Q9Y666 1083 aa12.21□□□□□ -0.45
CSNK1D-210ENST00000579308 CDY2AQ9Y6F7 541 aa12.21□□□□□ -0.45
CSNK1D-210ENST00000579308 SQORQ9Y6N5 450 aa12.21□□□□□ -0.45
CSNK1D-210ENST00000579308 MICAL3Q7RTP6 2002 aa12.2□□□□□ -0.46
CSNK1D-210ENST00000579308 ADGRA3Q8IWK6 1321 aa12.2□□□□□ -0.46
CSNK1D-210ENST00000579308 SPDYE3A6NKU9 549 aa12.2□□□□□ -0.46
CSNK1D-210ENST00000579308 ATG7O95352 703 aa12.2□□□□□ -0.46
CSNK1D-210ENST00000579308 RPLP2P05387 115 aaKnown RBP12.2□□□□□ -0.46
CSNK1D-210ENST00000579308 CTNNB1P35222 781 aa12.2□□□□□ -0.46
CSNK1D-210ENST00000579308 MRPS6P82932 125 aaKnown RBP12.2□□□□□ -0.46
CSNK1D-210ENST00000579308 HYAL1Q12794 435 aa12.2□□□□□ -0.46
CSNK1D-210ENST00000579308 TYW1BQ6NUM6 668 aa12.2□□□□□ -0.46
CSNK1D-210ENST00000579308 PLPPR4Q7Z2D5 763 aa12.2□□□□□ -0.46
CSNK1D-210ENST00000579308 RAB11FIP4Q86YS3 637 aa12.2□□□□□ -0.46
CSNK1D-210ENST00000579308 MXRA8Q9BRK3 442 aa12.2□□□□□ -0.46
CSNK1D-210ENST00000579308 C11orf84Q9BUA3 381 aaPredicted RBP12.2□□□□□ -0.46
CSNK1D-210ENST00000579308 PLVAPQ9BX97 442 aa12.2□□□□□ -0.46
CSNK1D-210ENST00000579308 LRRC2Q9BYS8 371 aa12.2□□□□□ -0.46
CSNK1D-210ENST00000579308 LMAN2LQ9H0V9 348 aa12.2□□□□□ -0.46
CSNK1D-210ENST00000579308 JPH1Q9HDC5 661 aaPredicted RBP12.2□□□□□ -0.46
CSNK1D-210ENST00000579308 PKD2L1Q9P0L9 805 aa12.2□□□□□ -0.46
CSNK1D-210ENST00000579308 HCN4Q9Y3Q4 1203 aa12.2□□□□□ -0.46
CSNK1D-210ENST00000579308 RWDD3Q9Y3V2 267 aa12.2□□□□□ -0.46
CSNK1D-210ENST00000579308 PCDHA2Q9Y5H9 948 aa12.2□□□□□ -0.46
CSNK1D-210ENST00000579308 SIP14410 1827 aa12.2□□□□□ -0.46
CSNK1D-210ENST00000579308 NFASCO94856 1347 aa12.19□□□□□ -0.46
CSNK1D-210ENST00000579308 PRR33A8MZF0 331 aa12.19□□□□□ -0.46
CSNK1D-210ENST00000579308 MEIS1O00470 390 aa12.19□□□□□ -0.46
CSNK1D-210ENST00000579308 ARP10275 920 aa12.19□□□□□ -0.46
CSNK1D-210ENST00000579308 ALADP13716 330 aa12.19□□□□□ -0.46
CSNK1D-210ENST00000579308 CD52P31358 61 aa12.19□□□□□ -0.46
CSNK1D-210ENST00000579308 EXOSC10Q01780 885 aaKnown RBP12.19□□□□□ -0.46
CSNK1D-210ENST00000579308 ZP2Q05996 745 aa12.19□□□□□ -0.46
CSNK1D-210ENST00000579308 PLCB4Q15147 1175 aa12.19□□□□□ -0.46
CSNK1D-210ENST00000579308 IER5Q5VY09 327 aa12.19□□□□□ -0.46
CSNK1D-210ENST00000579308 WWC2Q6AWC2 1192 aa12.19□□□□□ -0.46
CSNK1D-210ENST00000579308 HEATR3Q7Z4Q2 680 aa12.19□□□□□ -0.46
CSNK1D-210ENST00000579308 RIC8AQ9NPQ8 531 aa12.19□□□□□ -0.46
CSNK1D-210ENST00000579308 SLC9A2Q9UBY0 812 aa12.19□□□□□ -0.46
CSNK1D-210ENST00000579308 PRKAG3Q9UGI9 489 aa12.19□□□□□ -0.46
CSNK1D-210ENST00000579308 PLAGL2Q9UPG8 496 aa12.19□□□□□ -0.46
CSNK1D-210ENST00000579308 MYO7AQ13402 2215 aa12.18□□□□□ -0.46
CSNK1D-210ENST00000579308 IGKV6D-21A0A0A0MT36 114 aa12.18□□□□□ -0.46
CSNK1D-210ENST00000579308 DNAJB1P25685 340 aa12.18□□□□□ -0.46
CSNK1D-210ENST00000579308 SSTR3P32745 418 aaPredicted RBP12.18□□□□□ -0.46
CSNK1D-210ENST00000579308 ACTR2P61160 394 aa12.18□□□□□ -0.46
CSNK1D-210ENST00000579308 IGBP1P78318 339 aa12.18□□□□□ -0.46
CSNK1D-210ENST00000579308 IRX6P78412 446 aaPredicted RBP12.18□□□□□ -0.46
CSNK1D-210ENST00000579308 DLX2Q07687 328 aaPredicted RBP12.18□□□□□ -0.46
CSNK1D-210ENST00000579308 ITGB3BPQ13352 177 aaPredicted RBP12.18□□□□□ -0.46
CSNK1D-210ENST00000579308 BTG3Q14201 252 aaPredicted RBP12.18□□□□□ -0.46
CSNK1D-210ENST00000579308 CEP55Q53EZ4 464 aa12.18□□□□□ -0.46
CSNK1D-210ENST00000579308 APOA5Q6Q788 366 aa12.18□□□□□ -0.46
CSNK1D-210ENST00000579308 ADHFE1Q8IWW8 467 aa12.18□□□□□ -0.46
CSNK1D-210ENST00000579308 NME8Q8N427 588 aa12.18□□□□□ -0.46
CSNK1D-210ENST00000579308 FTHL17Q9BXU8 183 aa12.18□□□□□ -0.46
CSNK1D-210ENST00000579308 FAM49AQ9H0Q0 323 aaPredicted RBP12.18□□□□□ -0.46
CSNK1D-210ENST00000579308 TMX1Q9H3N1 280 aa12.18□□□□□ -0.46
CSNK1D-210ENST00000579308 AZI2Q9H6S1 392 aa12.18□□□□□ -0.46
CSNK1D-210ENST00000579308 AGO4Q9HCK5 861 aaKnown RBP12.18□□□□□ -0.46
CSNK1D-210ENST00000579308 FAM217BQ9NTX9 383 aaPredicted RBP12.18□□□□□ -0.46
CSNK1D-210ENST00000579308 CLDND1Q9NY35 253 aa12.18□□□□□ -0.46
CSNK1D-210ENST00000579308 BRPF3Q9ULD4 1205 aa12.18□□□□□ -0.46
CSNK1D-210ENST00000579308 PADI3Q9ULW8 664 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms