RNA–Protein interactions for RNA: ENST00000579028.1

BRIP1-204, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

TSL 5

Gene BRIP1, Length 790 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-204ENST00000579028 H0Y858 1186 aa10.08□□□□□ -0.8
BRIP1-204ENST00000579028 GCOM1H8Y6P7 765 aaPredicted RBP10.08□□□□□ -0.8
BRIP1-204ENST00000579028 ZBTB5O15062 677 aa10.08□□□□□ -0.8
BRIP1-204ENST00000579028 FIBPO43427 364 aa10.08□□□□□ -0.8
BRIP1-204ENST00000579028 KDM4AO75164 1064 aa10.08□□□□□ -0.8
BRIP1-204ENST00000579028 STAM2O75886 525 aa10.08□□□□□ -0.8
BRIP1-204ENST00000579028 POLR2MP0CAP2 368 aa10.08□□□□□ -0.8
BRIP1-204ENST00000579028 MRPS9P82933 396 aaKnown RBP10.08□□□□□ -0.8
BRIP1-204ENST00000579028 SEMA3FQ13275 785 aa10.08□□□□□ -0.8
BRIP1-204ENST00000579028 NMIQ13287 307 aaPredicted RBP10.08□□□□□ -0.8
BRIP1-204ENST00000579028 PTPN21Q16825 1174 aa10.08□□□□□ -0.8
BRIP1-204ENST00000579028 RUFY4Q6ZNE9 571 aa10.08□□□□□ -0.8
BRIP1-204ENST00000579028 TSHZ1Q6ZSZ6 1077 aa10.08□□□□□ -0.8
BRIP1-204ENST00000579028 CYFIP1Q7L576 1253 aa10.08□□□□□ -0.8
BRIP1-204ENST00000579028 ASCL5Q7RTU5 278 aa10.08□□□□□ -0.8
BRIP1-204ENST00000579028 NPAS4Q8IUM7 802 aa10.08□□□□□ -0.8
BRIP1-204ENST00000579028 STAG2Q8N3U4 1231 aa10.08□□□□□ -0.8
BRIP1-204ENST00000579028 ATP8B4Q8TF62 1192 aa10.08□□□□□ -0.8
BRIP1-204ENST00000579028 LINC01599Q8WXQ3 324 aa10.08□□□□□ -0.8
BRIP1-204ENST00000579028 RPGRIP1Q96KN7 1286 aa10.08□□□□□ -0.8
BRIP1-204ENST00000579028 TLR9Q9NR96 1032 aa10.08□□□□□ -0.8
BRIP1-204ENST00000579028 PCDHA1Q9Y5I3 950 aa10.08□□□□□ -0.8
BRIP1-204ENST00000579028 PLXNA4Q9HCM2 1894 aa10.08□□□□□ -0.8
BRIP1-204ENST00000579028 FSD2A1L4K1 749 aa10.07□□□□□ -0.8
BRIP1-204ENST00000579028 B4E1Z4 1266 aa10.07□□□□□ -0.8
BRIP1-204ENST00000579028 KLRF2D3W0D1 207 aa10.07□□□□□ -0.8
BRIP1-204ENST00000579028 ZNF213O14771 459 aa10.07□□□□□ -0.8
BRIP1-204ENST00000579028 TRAF1Q13077 416 aa10.07□□□□□ -0.8
BRIP1-204ENST00000579028 UTP14CQ5TAP6 766 aaKnown RBP10.07□□□□□ -0.8
BRIP1-204ENST00000579028 ERMP1Q7Z2K6 904 aa10.07□□□□□ -0.8
BRIP1-204ENST00000579028 RBM23Q86U06 439 aaKnown RBP10.07□□□□□ -0.8
BRIP1-204ENST00000579028 RSPH3Q86UC2 560 aa10.07□□□□□ -0.8
BRIP1-204ENST00000579028 RTN4RL1Q86UN2 441 aaPredicted RBP10.07□□□□□ -0.8
BRIP1-204ENST00000579028 FCHSD1Q86WN1 690 aa10.07□□□□□ -0.8
BRIP1-204ENST00000579028 RIPOR3Q96MK2 946 aa10.07□□□□□ -0.8
BRIP1-204ENST00000579028 SENP7Q9BQF6 1050 aa10.07□□□□□ -0.8
BRIP1-204ENST00000579028 TLE6Q9H808 572 aa10.07□□□□□ -0.8
BRIP1-204ENST00000579028 AGO3Q9H9G7 860 aaKnown RBP10.07□□□□□ -0.8
BRIP1-204ENST00000579028 ZSWIM5Q9P217 1185 aa10.07□□□□□ -0.8
BRIP1-204ENST00000579028 TELO2Q9Y4R8 837 aa10.07□□□□□ -0.8
BRIP1-204ENST00000579028 PCDHB15Q9Y5E8 787 aa10.07□□□□□ -0.8
BRIP1-204ENST00000579028 CDY2AQ9Y6F7 541 aa10.07□□□□□ -0.8
BRIP1-204ENST00000579028 SQORQ9Y6N5 450 aa10.07□□□□□ -0.8
BRIP1-204ENST00000579028 C5orf42Q9H799 3197 aa10.07□□□□□ -0.8
BRIP1-204ENST00000579028 MBLAC1A4D2B0 266 aaPredicted RBP10.06□□□□□ -0.8
BRIP1-204ENST00000579028 PRR23AA6NEV1 266 aa10.06□□□□□ -0.8
BRIP1-204ENST00000579028 MAP3K13O43283 966 aa10.06□□□□□ -0.8
BRIP1-204ENST00000579028 PDGFBP01127 241 aaPredicted RBP10.06□□□□□ -0.8
BRIP1-204ENST00000579028 RPLP2P05387 115 aaKnown RBP10.06□□□□□ -0.8
BRIP1-204ENST00000579028 STAG3L1P0CL83 205 aa10.06□□□□□ -0.8
BRIP1-204ENST00000579028 NBL1P41271 181 aa10.06□□□□□ -0.8
BRIP1-204ENST00000579028 PDE1AP54750 535 aa10.06□□□□□ -0.8
BRIP1-204ENST00000579028 MFAP1P55081 439 aaKnown RBP10.06□□□□□ -0.8
BRIP1-204ENST00000579028 UBE3AQ05086 875 aa10.06□□□□□ -0.8
BRIP1-204ENST00000579028 DUSP6Q16828 381 aa10.06□□□□□ -0.8
BRIP1-204ENST00000579028 SLC35G1Q2M3R5 365 aa10.06□□□□□ -0.8
BRIP1-204ENST00000579028 VN1R2Q8NFZ6 395 aa10.06□□□□□ -0.8
BRIP1-204ENST00000579028 DNAJB3Q8WWF6 145 aa10.06□□□□□ -0.8
BRIP1-204ENST00000579028 CDCA3Q99618 268 aaPredicted RBP10.06□□□□□ -0.8
BRIP1-204ENST00000579028 FTHL17Q9BXU8 183 aa10.06□□□□□ -0.8
BRIP1-204ENST00000579028 ZBTB47Q9UFB7 747 aaPredicted RBP10.06□□□□□ -0.8
BRIP1-204ENST00000579028 MAD2L2Q9UI95 211 aa10.06□□□□□ -0.8
BRIP1-204ENST00000579028 TUBE1Q9UJT0 475 aa10.06□□□□□ -0.8
BRIP1-204ENST00000579028 PCDHGC5Q9Y5F6 944 aa10.06□□□□□ -0.8
BRIP1-204ENST00000579028 PALM3A6NDB9 673 aaPredicted RBP10.05□□□□□ -0.8
BRIP1-204ENST00000579028 CD52P31358 61 aa10.05□□□□□ -0.8
BRIP1-204ENST00000579028 TCF7P36402 384 aaPredicted RBP10.05□□□□□ -0.8
BRIP1-204ENST00000579028 MRPS6P82932 125 aaKnown RBP10.05□□□□□ -0.8
BRIP1-204ENST00000579028 RBM10P98175 930 aaKnown RBP10.05□□□□□ -0.8
BRIP1-204ENST00000579028 PPFIA1Q13136 1202 aa10.05□□□□□ -0.8
BRIP1-204ENST00000579028 KCNC3Q14003 757 aa10.05□□□□□ -0.8
BRIP1-204ENST00000579028 GRIK4Q16099 956 aa10.05□□□□□ -0.8
BRIP1-204ENST00000579028 PAN2Q504Q3 1202 aaKnown RBP10.05□□□□□ -0.8
BRIP1-204ENST00000579028 MARCH8Q5T0T0 291 aa10.05□□□□□ -0.8
BRIP1-204ENST00000579028 PDE12Q6L8Q7 609 aaKnown RBP10.05□□□□□ -0.8
BRIP1-204ENST00000579028 TMEM184AQ6ZMB5 413 aa10.05□□□□□ -0.8
BRIP1-204ENST00000579028 NEK1Q96PY6 1258 aa10.05□□□□□ -0.8
BRIP1-204ENST00000579028 S1PR5Q9H228 398 aa10.05□□□□□ -0.8
BRIP1-204ENST00000579028 RIOX1Q9H6W3 641 aa10.05□□□□□ -0.8
BRIP1-204ENST00000579028 RTEL1Q9NZ71 1219 aa10.05□□□□□ -0.8
BRIP1-204ENST00000579028 TRPC6Q9Y210 931 aa10.05□□□□□ -0.8
BRIP1-204ENST00000579028 ZDBF2Q9HCK1 2354 aa10.04□□□□□ -0.8
BRIP1-204ENST00000579028 PER2O15055 1255 aa10.04□□□□□ -0.8
BRIP1-204ENST00000579028 SCG2P13521 617 aa10.04□□□□□ -0.8
BRIP1-204ENST00000579028 GATMP50440 423 aa10.04□□□□□ -0.8
BRIP1-204ENST00000579028 SP4Q02446 784 aa10.04□□□□□ -0.8
BRIP1-204ENST00000579028 SEC23AQ15436 765 aa10.04□□□□□ -0.8
BRIP1-204ENST00000579028 IFIT1BQ5T764 474 aaKnown RBP10.04□□□□□ -0.8
BRIP1-204ENST00000579028 PCNX4Q63HM2 1172 aa10.04□□□□□ -0.8
BRIP1-204ENST00000579028 XRRA1Q6P2D8 792 aa10.04□□□□□ -0.8
BRIP1-204ENST00000579028 HOMER1Q86YM7 354 aa10.04□□□□□ -0.8
BRIP1-204ENST00000579028 GIMAP8Q8ND71 665 aaPredicted RBP10.04□□□□□ -0.8
BRIP1-204ENST00000579028 RASGRP4Q8TDF6 673 aa10.04□□□□□ -0.8
BRIP1-204ENST00000579028 MICAL1Q8TDZ2 1067 aa10.04□□□□□ -0.8
BRIP1-204ENST00000579028 PIGSQ96S52 555 aa10.04□□□□□ -0.8
BRIP1-204ENST00000579028 UBAC1Q9BSL1 405 aa10.04□□□□□ -0.8
BRIP1-204ENST00000579028 KRT23Q9C075 422 aa10.04□□□□□ -0.8
BRIP1-204ENST00000579028 ERAP1Q9NZ08 941 aa10.04□□□□□ -0.8
BRIP1-204ENST00000579028 FNDC1Q4ZHG4 1894 aaPredicted RBP10.04□□□□□ -0.8
BRIP1-204ENST00000579028 IGSF9BQ9UPX0 1349 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms