RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 PLPPR4Q7Z2D5 763 aa7.41□□□□□ -1.22
TRAF4-213ENST00000578917 NEK8Q86SG6 692 aa7.41□□□□□ -1.22
TRAF4-213ENST00000578917 SERINC5Q86VE9 423 aa7.41□□□□□ -1.22
TRAF4-213ENST00000578917 POTEDQ86YR6 584 aa7.41□□□□□ -1.22
TRAF4-213ENST00000578917 SMAP1Q8IYB5 467 aaPredicted RBP7.41□□□□□ -1.22
TRAF4-213ENST00000578917 DAGLBQ8NCG7 672 aa7.41□□□□□ -1.22
TRAF4-213ENST00000578917 NSUN7Q8NE18 718 aaKnown RBP7.41□□□□□ -1.22
TRAF4-213ENST00000578917 IL27Q8NEV9 243 aa7.41□□□□□ -1.22
TRAF4-213ENST00000578917 OXER1Q8TDS5 423 aa7.41□□□□□ -1.22
TRAF4-213ENST00000578917 LMBR1Q8WVP7 490 aa7.41□□□□□ -1.22
TRAF4-213ENST00000578917 C8orf76Q96K31 380 aa7.41□□□□□ -1.22
TRAF4-213ENST00000578917 FAM161BQ96MY7 647 aa7.41□□□□□ -1.22
TRAF4-213ENST00000578917 RIT2Q99578 217 aa7.41□□□□□ -1.22
TRAF4-213ENST00000578917 LLPHQ9BRT6 129 aaKnown RBP7.41□□□□□ -1.22
TRAF4-213ENST00000578917 ZBED2Q9BTP6 218 aa7.41□□□□□ -1.22
TRAF4-213ENST00000578917 TEKT3Q9BXF9 490 aa7.41□□□□□ -1.22
TRAF4-213ENST00000578917 FAM49AQ9H0Q0 323 aaPredicted RBP7.41□□□□□ -1.22
TRAF4-213ENST00000578917 DISC1Q9NRI5 854 aa7.41□□□□□ -1.22
TRAF4-213ENST00000578917 NRBP2Q9NSY0 501 aa7.41□□□□□ -1.22
TRAF4-213ENST00000578917 DDX25Q9UHL0 483 aaKnown RBP7.41□□□□□ -1.22
TRAF4-213ENST00000578917 TUBE1Q9UJT0 475 aa7.41□□□□□ -1.22
TRAF4-213ENST00000578917 KIF3AQ9Y496 699 aa7.41□□□□□ -1.22
TRAF4-213ENST00000578917 PCDHA10Q9Y5I2 948 aa7.41□□□□□ -1.22
TRAF4-213ENST00000578917 GRXCR1A8MXD5 290 aa7.4□□□□□ -1.22
TRAF4-213ENST00000578917 WDR64B1ANS9 1081 aa7.4□□□□□ -1.22
TRAF4-213ENST00000578917 BTBD18B2RXH4 712 aa7.4□□□□□ -1.22
TRAF4-213ENST00000578917 KIF28PB7ZC32 967 aa7.4□□□□□ -1.22
TRAF4-213ENST00000578917 M0QZ92 97 aa7.4□□□□□ -1.22
TRAF4-213ENST00000578917 DHX15O43143 795 aaKnown RBP7.4□□□□□ -1.22
TRAF4-213ENST00000578917 LGR5O75473 907 aa7.4□□□□□ -1.22
TRAF4-213ENST00000578917 TDP2O95551 362 aa7.4□□□□□ -1.22
TRAF4-213ENST00000578917 CCNE2O96020 404 aa7.4□□□□□ -1.22
TRAF4-213ENST00000578917 FDPSP14324 419 aaKnown RBP7.4□□□□□ -1.22
TRAF4-213ENST00000578917 GCFC2P16383 781 aaKnown RBP7.4□□□□□ -1.22
TRAF4-213ENST00000578917 ATP2A2P16615 1042 aaKnown RBP7.4□□□□□ -1.22
TRAF4-213ENST00000578917 SFNP31947 248 aa7.4□□□□□ -1.22
TRAF4-213ENST00000578917 MCM2P49736 904 aa7.4□□□□□ -1.22
TRAF4-213ENST00000578917 JAK3P52333 1124 aa7.4□□□□□ -1.22
TRAF4-213ENST00000578917 HMGN5P82970 282 aaKnown RBP7.4□□□□□ -1.22
TRAF4-213ENST00000578917 GUCY1B3Q02153 619 aa7.4□□□□□ -1.22
TRAF4-213ENST00000578917 NR5A1Q13285 461 aa7.4□□□□□ -1.22
TRAF4-213ENST00000578917 Q4G0T1 1027 aa7.4□□□□□ -1.22
TRAF4-213ENST00000578917 ZNF697Q5TEC3 545 aa7.4□□□□□ -1.22
TRAF4-213ENST00000578917 IER5Q5VY09 327 aa7.4□□□□□ -1.22
TRAF4-213ENST00000578917 KRT40Q6A162 431 aa7.4□□□□□ -1.22
TRAF4-213ENST00000578917 TAF2Q6P1X5 1199 aa7.4□□□□□ -1.22
TRAF4-213ENST00000578917 ABHD15Q6UXT9 468 aa7.4□□□□□ -1.22
TRAF4-213ENST00000578917 Q7L0L9 218 aa7.4□□□□□ -1.22
TRAF4-213ENST00000578917 MIER3Q7Z3K6 550 aa7.4□□□□□ -1.22
TRAF4-213ENST00000578917 DIS3L2Q8IYB7 885 aaKnown RBP7.4□□□□□ -1.22
TRAF4-213ENST00000578917 METTL13Q8N6R0 699 aa7.4□□□□□ -1.22
TRAF4-213ENST00000578917 CRYGNQ8WXF5 182 aa7.4□□□□□ -1.22
TRAF4-213ENST00000578917 HERVK_113Q902F9 699 aa7.4□□□□□ -1.22
TRAF4-213ENST00000578917 DHX38Q92620 1227 aaKnown RBP7.4□□□□□ -1.22
TRAF4-213ENST00000578917 SLC28A3Q9HAS3 691 aa7.4□□□□□ -1.22
TRAF4-213ENST00000578917 GABBR1Q9UBS5 961 aa7.4□□□□□ -1.22
TRAF4-213ENST00000578917 EMSYQ7Z589 1322 aa7.4□□□□□ -1.22
TRAF4-213ENST00000578917 LAMA3Q16787 3333 aa7.39□□□□□ -1.23
TRAF4-213ENST00000578917 CYP3A7-CYP3A51PA0A087WV96 503 aa7.39□□□□□ -1.23
TRAF4-213ENST00000578917 DDX11L8A8MPP1 907 aa7.39□□□□□ -1.23
TRAF4-213ENST00000578917 H3BQV1 296 aa7.39□□□□□ -1.23
TRAF4-213ENST00000578917 HBP1O60381 514 aa7.39□□□□□ -1.23
TRAF4-213ENST00000578917 CAND2O75155 1236 aa7.39□□□□□ -1.23
TRAF4-213ENST00000578917 ATG7O95352 703 aa7.39□□□□□ -1.23
TRAF4-213ENST00000578917 MMP1P03956 469 aa7.39□□□□□ -1.23
TRAF4-213ENST00000578917 RPLP2P05387 115 aaKnown RBP7.39□□□□□ -1.23
TRAF4-213ENST00000578917 CYP3A7P24462 503 aa7.39□□□□□ -1.23
TRAF4-213ENST00000578917 KLRC1P26715 233 aa7.39□□□□□ -1.23
TRAF4-213ENST00000578917 HIC1Q14526 733 aa7.39□□□□□ -1.23
TRAF4-213ENST00000578917 PLCB4Q15147 1175 aa7.39□□□□□ -1.23
TRAF4-213ENST00000578917 RAB30Q15771 203 aa7.39□□□□□ -1.23
TRAF4-213ENST00000578917 ZNF484Q5JVG2 852 aa7.39□□□□□ -1.23
TRAF4-213ENST00000578917 MCTP1Q6DN14 999 aa7.39□□□□□ -1.23
TRAF4-213ENST00000578917 PPP4R3AQ6IN85 833 aa7.39□□□□□ -1.23
TRAF4-213ENST00000578917 GPR153Q6NV75 609 aa7.39□□□□□ -1.23
TRAF4-213ENST00000578917 CNKSR3Q6P9H4 555 aa7.39□□□□□ -1.23
TRAF4-213ENST00000578917 MOXD1Q6UVY6 613 aa7.39□□□□□ -1.23
TRAF4-213ENST00000578917 ATP8B4Q8TF62 1192 aa7.39□□□□□ -1.23
TRAF4-213ENST00000578917 TRAPPC12Q8WVT3 735 aa7.39□□□□□ -1.23
TRAF4-213ENST00000578917 DNAJB3Q8WWF6 145 aa7.39□□□□□ -1.23
TRAF4-213ENST00000578917 SEPT8Q92599 483 aa7.39□□□□□ -1.23
TRAF4-213ENST00000578917 SLC5A5Q92911 643 aa7.39□□□□□ -1.23
TRAF4-213ENST00000578917 GJA10Q969M2 543 aa7.39□□□□□ -1.23
TRAF4-213ENST00000578917 TIFAQ96CG3 184 aa7.39□□□□□ -1.23
TRAF4-213ENST00000578917 FAM20AQ96MK3 541 aa7.39□□□□□ -1.23
TRAF4-213ENST00000578917 PCYT2Q99447 389 aa7.39□□□□□ -1.23
TRAF4-213ENST00000578917 KIF2CQ99661 725 aa7.39□□□□□ -1.23
TRAF4-213ENST00000578917 CXXC1Q9P0U4 656 aaPredicted RBP7.39□□□□□ -1.23
TRAF4-213ENST00000578917 GINS2Q9Y248 185 aa7.39□□□□□ -1.23
TRAF4-213ENST00000578917 MYH6P13533 1939 aa7.39□□□□□ -1.23
TRAF4-213ENST00000578917 ABHD14A-ACY1A0A1B0GW23 586 aa7.38□□□□□ -1.23
TRAF4-213ENST00000578917 M0R2N6 131 aa7.38□□□□□ -1.23
TRAF4-213ENST00000578917 NBNO60934 754 aa7.38□□□□□ -1.23
TRAF4-213ENST00000578917 EFCAB14O75071 495 aa7.38□□□□□ -1.23
TRAF4-213ENST00000578917 BAIAP3O94812 1187 aa7.38□□□□□ -1.23
TRAF4-213ENST00000578917 DNAJB2P25686 324 aa7.38□□□□□ -1.23
TRAF4-213ENST00000578917 TMOD1P28289 359 aa7.38□□□□□ -1.23
TRAF4-213ENST00000578917 RABGGTBP53611 331 aa7.38□□□□□ -1.23
TRAF4-213ENST00000578917 TMEM62Q0P6H9 643 aa7.38□□□□□ -1.23
TRAF4-213ENST00000578917 NPY5RQ15761 445 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms