RNA–Protein interactions for RNA: ENST00000577536.1

CDH8-204, Transcript of cadherin 8, humanhuman

TSL 3

Gene CDH8, Length 324 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-204ENST00000577536 PCDH19Q8TAB3 1148 aa4.2□□□□□ -1.74
CDH8-204ENST00000577536 NBPF4Q96M43 638 aa4.2□□□□□ -1.74
CDH8-204ENST00000577536 CDK5RAP1Q96SZ6 601 aaKnown RBP4.2□□□□□ -1.74
CDH8-204ENST00000577536 TACO1Q9BSH4 297 aaKnown RBP4.2□□□□□ -1.74
CDH8-204ENST00000577536 KATNBL1Q9H079 304 aa4.2□□□□□ -1.74
CDH8-204ENST00000577536 SEC61A2Q9H9S3 476 aa4.2□□□□□ -1.74
CDH8-204ENST00000577536 SRPK3Q9UPE1 567 aa4.2□□□□□ -1.74
CDH8-204ENST00000577536 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.19□□□□□ -1.74
CDH8-204ENST00000577536 CCDC85CA6NKD9 419 aa4.19□□□□□ -1.74
CDH8-204ENST00000577536 FAM90A27PA6NNH2 459 aa4.19□□□□□ -1.74
CDH8-204ENST00000577536 DIAPH1O60610 1272 aaKnown RBP4.19□□□□□ -1.74
CDH8-204ENST00000577536 PTPN1P18031 435 aaKnown RBP4.19□□□□□ -1.74
CDH8-204ENST00000577536 ATP2B1P20020 1258 aa4.19□□□□□ -1.74
CDH8-204ENST00000577536 GUCY1A3Q02108 690 aa4.19□□□□□ -1.74
CDH8-204ENST00000577536 ARHGAP36Q6ZRI8 547 aa4.19□□□□□ -1.74
CDH8-204ENST00000577536 GPR155Q7Z3F1 870 aa4.19□□□□□ -1.74
CDH8-204ENST00000577536 SPRED1Q7Z699 444 aa4.19□□□□□ -1.74
CDH8-204ENST00000577536 IFNL2Q8IZJ0 200 aa4.19□□□□□ -1.74
CDH8-204ENST00000577536 SH3RF3Q8TEJ3 882 aaPredicted RBP4.19□□□□□ -1.74
CDH8-204ENST00000577536 FBXW5Q969U6 566 aa4.19□□□□□ -1.74
CDH8-204ENST00000577536 WWC2-AS2Q96NR7 200 aa4.19□□□□□ -1.74
CDH8-204ENST00000577536 IPO9Q96P70 1041 aaKnown RBP4.19□□□□□ -1.74
CDH8-204ENST00000577536 TANGO6Q9C0B7 1094 aa4.19□□□□□ -1.74
CDH8-204ENST00000577536 DEF6Q9H4E7 631 aa4.19□□□□□ -1.74
CDH8-204ENST00000577536 SLC39A2Q9NP94 309 aa4.19□□□□□ -1.74
CDH8-204ENST00000577536 CATSPERZQ9NTU4 200 aa4.19□□□□□ -1.74
CDH8-204ENST00000577536 SIRPGQ9P1W8 387 aa4.19□□□□□ -1.74
CDH8-204ENST00000577536 PPP1R1BQ9UD71 204 aaPredicted RBP4.19□□□□□ -1.74
CDH8-204ENST00000577536 PCDHA8Q9Y5H6 950 aa4.19□□□□□ -1.74
CDH8-204ENST00000577536 SLC4A7Q9Y6M7 1214 aa4.19□□□□□ -1.74
CDH8-204ENST00000577536 ARVCFO00192 962 aa4.18□□□□□ -1.74
CDH8-204ENST00000577536 MAN2B1O00754 1011 aa4.18□□□□□ -1.74
CDH8-204ENST00000577536 AKAP8O43823 692 aaKnown RBP4.18□□□□□ -1.74
CDH8-204ENST00000577536 ZNF623O75123 536 aa4.18□□□□□ -1.74
CDH8-204ENST00000577536 AMY2AP04746 511 aa4.18□□□□□ -1.74
CDH8-204ENST00000577536 FAM153BP0C7A2 387 aa4.18□□□□□ -1.74
CDH8-204ENST00000577536 PYGMP11217 842 aa4.18□□□□□ -1.74
CDH8-204ENST00000577536 PDE6AP16499 860 aa4.18□□□□□ -1.74
CDH8-204ENST00000577536 NAT1P18440 290 aa4.18□□□□□ -1.74
CDH8-204ENST00000577536 AMY2BP19961 511 aa4.18□□□□□ -1.74
CDH8-204ENST00000577536 POLD1P28340 1107 aa4.18□□□□□ -1.74
CDH8-204ENST00000577536 SELENOPP49908 381 aa4.18□□□□□ -1.74
CDH8-204ENST00000577536 GABREP78334 506 aa4.18□□□□□ -1.74
CDH8-204ENST00000577536 USP10Q14694 798 aaKnown RBP4.18□□□□□ -1.74
CDH8-204ENST00000577536 R3HDM1Q15032 1099 aaKnown RBP4.18□□□□□ -1.74
CDH8-204ENST00000577536 FIGNQ5HY92 759 aa4.18□□□□□ -1.74
CDH8-204ENST00000577536 ZNF585AQ6P3V2 769 aa4.18□□□□□ -1.74
CDH8-204ENST00000577536 DPP8Q6V1X1 898 aaPredicted RBP4.18□□□□□ -1.74
CDH8-204ENST00000577536 C16orf59Q7L2K0 433 aa4.18□□□□□ -1.74
CDH8-204ENST00000577536 OSTM1Q86WC4 334 aa4.18□□□□□ -1.74
CDH8-204ENST00000577536 PTRH1Q86Y79 214 aaKnown RBP4.18□□□□□ -1.74
CDH8-204ENST00000577536 EXOC2Q96KP1 924 aa4.18□□□□□ -1.74
CDH8-204ENST00000577536 GNRHR2Q96P88 292 aa4.18□□□□□ -1.74
CDH8-204ENST00000577536 LMF1Q96S06 567 aa4.18□□□□□ -1.74
CDH8-204ENST00000577536 RIC8BQ9NVN3 520 aa4.18□□□□□ -1.74
CDH8-204ENST00000577536 ARHGAP28Q9P2N2 729 aa4.18□□□□□ -1.74
CDH8-204ENST00000577536 CBLCQ9ULV8 474 aa4.18□□□□□ -1.74
CDH8-204ENST00000577536 PTPN22Q9Y2R2 807 aa4.18□□□□□ -1.74
CDH8-204ENST00000577536 ATP23Q9Y6H3 246 aa4.18□□□□□ -1.74
CDH8-204ENST00000577536 GSTA4O15217 222 aa4.17□□□□□ -1.74
CDH8-204ENST00000577536 CUTAO60888 179 aa4.17□□□□□ -1.74
CDH8-204ENST00000577536 ZNF888P0CJ79 500 aaPredicted RBP4.17□□□□□ -1.74
CDH8-204ENST00000577536 SRGAP2CP0DJJ0 459 aa4.17□□□□□ -1.74
CDH8-204ENST00000577536 KRT15P19012 456 aa4.17□□□□□ -1.74
CDH8-204ENST00000577536 GJA4P35212 333 aa4.17□□□□□ -1.74
CDH8-204ENST00000577536 JAM2P57087 298 aa4.17□□□□□ -1.74
CDH8-204ENST00000577536 ST5P78524 1137 aa4.17□□□□□ -1.74
CDH8-204ENST00000577536 CRY1Q16526 586 aa4.17□□□□□ -1.74
CDH8-204ENST00000577536 LONRF2Q1L5Z9 754 aa4.17□□□□□ -1.74
CDH8-204ENST00000577536 EP400NLQ6ZTU2 488 aa4.17□□□□□ -1.74
CDH8-204ENST00000577536 PALM2Q8IXS6 379 aa4.17□□□□□ -1.74
CDH8-204ENST00000577536 Q8TCH9 128 aa4.17□□□□□ -1.74
CDH8-204ENST00000577536 NEIL1Q96FI4 390 aaPredicted RBP4.17□□□□□ -1.74
CDH8-204ENST00000577536 LRRC37BQ96QE4 947 aa4.17□□□□□ -1.74
CDH8-204ENST00000577536 DHRS4Q9BTZ2 278 aa4.17□□□□□ -1.74
CDH8-204ENST00000577536 HIRIP3Q9BW71 556 aaPredicted RBP4.17□□□□□ -1.74
CDH8-204ENST00000577536 CARD11Q9BXL7 1154 aa4.17□□□□□ -1.74
CDH8-204ENST00000577536 SEMA4AQ9H3S1 761 aa4.17□□□□□ -1.74
CDH8-204ENST00000577536 TCAF1Q9Y4C2 921 aa4.17□□□□□ -1.74
CDH8-204ENST00000577536 PCDHA9Q9Y5H5 950 aa4.17□□□□□ -1.74
CDH8-204ENST00000577536 KDM2BQ8NHM5 1336 aa4.17□□□□□ -1.74
CDH8-204ENST00000577536 ESYT3A0FGR9 886 aa4.16□□□□□ -1.74
CDH8-204ENST00000577536 CCDC66A2RUB6 948 aa4.16□□□□□ -1.74
CDH8-204ENST00000577536 ZNF561-AS1K7EIQ3 104 aa4.16□□□□□ -1.74
CDH8-204ENST00000577536 MUSKO15146 869 aa4.16□□□□□ -1.74
CDH8-204ENST00000577536 CRTAMO95727 393 aa4.16□□□□□ -1.74
CDH8-204ENST00000577536 FSHBP01225 129 aa4.16□□□□□ -1.74
CDH8-204ENST00000577536 C4BPAP04003 597 aaKnown RBP4.16□□□□□ -1.74
CDH8-204ENST00000577536 C6P13671 934 aa4.16□□□□□ -1.74
CDH8-204ENST00000577536 TACR2P21452 398 aa4.16□□□□□ -1.74
CDH8-204ENST00000577536 TOP3AQ13472 1001 aaPredicted RBP4.16□□□□□ -1.74
CDH8-204ENST00000577536 SERINC3Q13530 473 aa4.16□□□□□ -1.74
CDH8-204ENST00000577536 ZNF568Q3ZCX4 644 aa4.16□□□□□ -1.74
CDH8-204ENST00000577536 FAM47CQ5HY64 1035 aa4.16□□□□□ -1.74
CDH8-204ENST00000577536 TCTN3Q6NUS6 607 aa4.16□□□□□ -1.74
CDH8-204ENST00000577536 SLC16A11Q8NCK7 471 aa4.16□□□□□ -1.74
CDH8-204ENST00000577536 SMURF1Q9HCE7 757 aa4.16□□□□□ -1.74
CDH8-204ENST00000577536 MRPS23Q9Y3D9 190 aaKnown RBP4.16□□□□□ -1.74
CDH8-204ENST00000577536 FOXS1O43638 330 aa4.15□□□□□ -1.75
CDH8-204ENST00000577536 CLASP2O75122 1294 aaKnown RBP4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms