RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 PPFIA1Q13136 1202 aa26.6■■□□□ 1.85
SNF8-217ENST00000576353 TRIM71Q2Q1W2 868 aaKnown RBP26.6■■□□□ 1.85
SNF8-217ENST00000576353 LETM2Q2VYF4 491 aa26.6■■□□□ 1.85
SNF8-217ENST00000576353 KRT40Q6A162 431 aa26.6■■□□□ 1.85
SNF8-217ENST00000576353 PIK3AP1Q6ZUJ8 805 aa26.6■■□□□ 1.85
SNF8-217ENST00000576353 LMBR1Q8WVP7 490 aa26.6■■□□□ 1.85
SNF8-217ENST00000576353 SLC5A5Q92911 643 aa26.6■■□□□ 1.85
SNF8-217ENST00000576353 MBOAT7Q96N66 472 aa26.6■■□□□ 1.85
SNF8-217ENST00000576353 BACH2Q9BYV9 841 aa26.6■■□□□ 1.85
SNF8-217ENST00000576353 GAS7O60861 476 aa26.59■■□□□ 1.85
SNF8-217ENST00000576353 GCFC2P16383 781 aaKnown RBP26.59■■□□□ 1.85
SNF8-217ENST00000576353 MCM2P49736 904 aa26.59■■□□□ 1.85
SNF8-217ENST00000576353 ADAM17P78536 824 aa26.59■■□□□ 1.85
SNF8-217ENST00000576353 DEFB128Q7Z7B8 93 aa26.59■■□□□ 1.85
SNF8-217ENST00000576353 HERVK_113Q902F9 699 aa26.59■■□□□ 1.85
SNF8-217ENST00000576353 DDX25Q9UHL0 483 aaKnown RBP26.59■■□□□ 1.85
SNF8-217ENST00000576353 PCDHA10Q9Y5I2 948 aa26.59■■□□□ 1.85
SNF8-217ENST00000576353 RRN3P2A6NIE6 340 aa26.58■■□□□ 1.85
SNF8-217ENST00000576353 PSAPP07602 524 aa26.58■■□□□ 1.85
SNF8-217ENST00000576353 NR5A1Q13285 461 aa26.58■■□□□ 1.85
SNF8-217ENST00000576353 GRIK4Q16099 956 aa26.58■■□□□ 1.85
SNF8-217ENST00000576353 LRCH2Q5VUJ6 765 aa26.58■■□□□ 1.85
SNF8-217ENST00000576353 PPP4R3AQ6IN85 833 aa26.58■■□□□ 1.85
SNF8-217ENST00000576353 FAM184AQ8NB25 1140 aa26.58■■□□□ 1.85
SNF8-217ENST00000576353 TEKT3Q9BXF9 490 aa26.58■■□□□ 1.85
SNF8-217ENST00000576353 ZNF302Q9NR11 478 aa26.58■■□□□ 1.85
SNF8-217ENST00000576353 TRPC6Q9Y210 931 aa26.58■■□□□ 1.85
SNF8-217ENST00000576353 CAND2O75155 1236 aa26.57■■□□□ 1.84
SNF8-217ENST00000576353 THPOP40225 353 aa26.57■■□□□ 1.84
SNF8-217ENST00000576353 FOSBP53539 338 aa26.57■■□□□ 1.84
SNF8-217ENST00000576353 PLCB4Q15147 1175 aa26.57■■□□□ 1.84
SNF8-217ENST00000576353 SAFBQ15424 915 aaKnown RBP eCLIP26.57■■□□□ 1.84
SNF8-217ENST00000576353 ZNF618Q5T7W0 954 aa26.57■■□□□ 1.84
SNF8-217ENST00000576353 RASIP1Q5U651 963 aa26.57■■□□□ 1.84
SNF8-217ENST00000576353 SWSAP1Q6NVH7 229 aa26.57■■□□□ 1.84
SNF8-217ENST00000576353 OTOP2Q7RTS6 562 aa26.57■■□□□ 1.84
SNF8-217ENST00000576353 DIS3L2Q8IYB7 885 aaKnown RBP26.57■■□□□ 1.84
SNF8-217ENST00000576353 WNT8BQ93098 351 aa26.57■■□□□ 1.84
SNF8-217ENST00000576353 C8orf76Q96K31 380 aa26.57■■□□□ 1.84
SNF8-217ENST00000576353 FTOQ9C0B1 505 aaKnown RBP eCLIP26.57■■□□□ 1.84
SNF8-217ENST00000576353 SAMM50Q9Y512 469 aa26.57■■□□□ 1.84
SNF8-217ENST00000576353 HSFX4A0A1B0GTS1 333 aaPredicted RBP26.56■■□□□ 1.84
SNF8-217ENST00000576353 HSFX3A0A1B0GWH4 333 aaPredicted RBP26.56■■□□□ 1.84
SNF8-217ENST00000576353 POTEB3A0JP26 581 aa26.56■■□□□ 1.84
SNF8-217ENST00000576353 WDR64B1ANS9 1081 aa26.56■■□□□ 1.84
SNF8-217ENST00000576353 BTBD18B2RXH4 712 aa26.56■■□□□ 1.84
SNF8-217ENST00000576353 ACTN1P12814 892 aa26.56■■□□□ 1.84
SNF8-217ENST00000576353 INSRRP14616 1297 aa26.56■■□□□ 1.84
SNF8-217ENST00000576353 SMAD3P84022 425 aaKnown RBP26.56■■□□□ 1.84
SNF8-217ENST00000576353 TAF2Q6P1X5 1199 aa26.56■■□□□ 1.84
SNF8-217ENST00000576353 PDXDC2PQ6P474 469 aa26.56■■□□□ 1.84
SNF8-217ENST00000576353 POTEBQ6S5H4 581 aa26.56■■□□□ 1.84
SNF8-217ENST00000576353 CCDC60Q8IWA6 550 aaPredicted RBP26.56■■□□□ 1.84
SNF8-217ENST00000576353 TNFRSF25Q93038 417 aa26.56■■□□□ 1.84
SNF8-217ENST00000576353 VWCEQ96DN2 955 aa26.56■■□□□ 1.84
SNF8-217ENST00000576353 CCNT1O60563 726 aaKnown RBP26.55■■□□□ 1.84
SNF8-217ENST00000576353 SFNP31947 248 aa26.55■■□□□ 1.84
SNF8-217ENST00000576353 DISC1Q9NRI5 854 aa26.55■■□□□ 1.84
SNF8-217ENST00000576353 TUBE1Q9UJT0 475 aa26.55■■□□□ 1.84
SNF8-217ENST00000576353 MBLAC1A4D2B0 266 aaPredicted RBP26.54■■□□□ 1.84
SNF8-217ENST00000576353 RSPH10B2B2RC85 870 aa26.54■■□□□ 1.84
SNF8-217ENST00000576353 PSMD10O75832 226 aa26.54■■□□□ 1.84
SNF8-217ENST00000576353 RSPH10BP0C881 870 aa26.54■■□□□ 1.84
SNF8-217ENST00000576353 JAK3P52333 1124 aa26.54■■□□□ 1.84
SNF8-217ENST00000576353 IGBP1P78318 339 aa26.54■■□□□ 1.84
SNF8-217ENST00000576353 EARS2Q5JPH6 523 aaKnown RBP26.54■■□□□ 1.84
SNF8-217ENST00000576353 ETNPPLQ8TBG4 499 aa26.54■■□□□ 1.84
SNF8-217ENST00000576353 ATP8B4Q8TF62 1192 aa26.54■■□□□ 1.84
SNF8-217ENST00000576353 TMX3Q96JJ7 454 aa26.54■■□□□ 1.84
SNF8-217ENST00000576353 FAM20AQ96MK3 541 aa26.54■■□□□ 1.84
SNF8-217ENST00000576353 MAFBQ9Y5Q3 323 aaPredicted RBP26.54■■□□□ 1.84
SNF8-217ENST00000576353 SLC37A4O43826 429 aa26.53■■□□□ 1.84
SNF8-217ENST00000576353 HBP1O60381 514 aa26.53■■□□□ 1.84
SNF8-217ENST00000576353 MARCH8Q5T0T0 291 aa26.53■■□□□ 1.84
SNF8-217ENST00000576353 TRAF7Q6Q0C0 670 aa26.53■■□□□ 1.84
SNF8-217ENST00000576353 RSPH3Q86UC2 560 aa26.53■■□□□ 1.84
SNF8-217ENST00000576353 RDM1Q8NG50 284 aa26.53■■□□□ 1.84
SNF8-217ENST00000576353 UNC45AQ9H3U1 944 aa26.53■■□□□ 1.84
SNF8-217ENST00000576353 KIF3AQ9Y496 699 aa26.53■■□□□ 1.84
SNF8-217ENST00000576353 LAMA3Q16787 3333 aa26.52■■□□□ 1.84
SNF8-217ENST00000576353 TBX3O15119 743 aa26.52■■□□□ 1.84
SNF8-217ENST00000576353 CXCL10P02778 98 aa26.52■■□□□ 1.84
SNF8-217ENST00000576353 RPLP2P05387 115 aaKnown RBP26.52■■□□□ 1.84
SNF8-217ENST00000576353 GUCY1B3Q02153 619 aa26.52■■□□□ 1.84
SNF8-217ENST00000576353 RPAINQ86UA6 219 aa26.52■■□□□ 1.84
SNF8-217ENST00000576353 CKAP2LQ8IYA6 745 aa26.52■■□□□ 1.84
SNF8-217ENST00000576353 FBXO18Q8NFZ0 1043 aa26.52■■□□□ 1.84
SNF8-217ENST00000576353 GJA10Q969M2 543 aa26.52■■□□□ 1.84
SNF8-217ENST00000576353 CXXC1Q9P0U4 656 aaPredicted RBP26.52■■□□□ 1.84
SNF8-217ENST00000576353 GABBR1Q9UBS5 961 aa26.52■■□□□ 1.84
SNF8-217ENST00000576353 SLC4A7Q9Y6M7 1214 aa26.52■■□□□ 1.84
SNF8-217ENST00000576353 FAM205CA6NFA0 338 aa26.51■■□□□ 1.83
SNF8-217ENST00000576353 ZBBXA8MT70 800 aa26.51■■□□□ 1.83
SNF8-217ENST00000576353 CHMP2AO43633 222 aa26.51■■□□□ 1.83
SNF8-217ENST00000576353 MARCH6O60337 910 aa26.51■■□□□ 1.83
SNF8-217ENST00000576353 NBNO60934 754 aa26.51■■□□□ 1.83
SNF8-217ENST00000576353 SLC34A2O95436 690 aa26.51■■□□□ 1.83
SNF8-217ENST00000576353 GPNMBQ14956 572 aa26.51■■□□□ 1.83
SNF8-217ENST00000576353 BBXQ8WY36 941 aaPredicted RBP26.51■■□□□ 1.83
SNF8-217ENST00000576353 KCNMB3Q9NPA1 279 aa26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms