RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 CCT8L1PA6NM43 557 aa15.86■□□□□ 0.13
SCARF1-209ENST00000576012 PJA2O43164 708 aa15.86■□□□□ 0.13
SCARF1-209ENST00000576012 KRT13P13646 458 aa15.86■□□□□ 0.13
SCARF1-209ENST00000576012 AADACL2Q6P093 401 aa15.86■□□□□ 0.13
SCARF1-209ENST00000576012 AGAP11Q8TF27 550 aa15.86■□□□□ 0.13
SCARF1-209ENST00000576012 SLC4A9Q96Q91 983 aa15.86■□□□□ 0.13
SCARF1-209ENST00000576012 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.86■□□□□ 0.135e-8■■■■■ 167.7
SCARF1-209ENST00000576012 IL17RBQ9NRM6 502 aa15.86■□□□□ 0.13
SCARF1-209ENST00000576012 DBR1Q9UK59 544 aaKnown RBP15.86■□□□□ 0.13
SCARF1-209ENST00000576012 AGAP1Q9UPQ3 857 aa15.86■□□□□ 0.13
SCARF1-209ENST00000576012 SATB1Q01826 763 aa15.86■□□□□ 0.13
SCARF1-209ENST00000576012 C7orf25Q9BPX7 421 aa15.86■□□□□ 0.13
SCARF1-209ENST00000576012 DNAJC17Q9NVM6 304 aaKnown RBP15.86■□□□□ 0.13
SCARF1-209ENST00000576012 SIPA1L3O60292 1781 aaPredicted RBP15.86■□□□□ 0.13
SCARF1-209ENST00000576012 TMEM110-MUSTN1A8MSY1 372 aa15.86■□□□□ 0.13
SCARF1-209ENST00000576012 PGRMC1O00264 195 aaKnown RBP15.86■□□□□ 0.13
SCARF1-209ENST00000576012 TSPY3P0CV98 308 aa15.86■□□□□ 0.13
SCARF1-209ENST00000576012 TSPY8P0CW00 308 aa15.86■□□□□ 0.13
SCARF1-209ENST00000576012 SLC8A1P32418 973 aa15.86■□□□□ 0.13
SCARF1-209ENST00000576012 EIF6P56537 245 aaKnown RBP15.86■□□□□ 0.13
SCARF1-209ENST00000576012 MECOMQ03112 1051 aa15.86■□□□□ 0.13
SCARF1-209ENST00000576012 GRB10Q13322 594 aa15.86■□□□□ 0.13
SCARF1-209ENST00000576012 MREGQ8N565 214 aa15.86■□□□□ 0.13
SCARF1-209ENST00000576012 BLOC1S4Q9NUP1 217 aa15.86■□□□□ 0.13
SCARF1-209ENST00000576012 KLRF2D3W0D1 207 aa15.85■□□□□ 0.13
SCARF1-209ENST00000576012 PLCB4Q15147 1175 aa15.85■□□□□ 0.13
SCARF1-209ENST00000576012 NONOQ15233 471 aaKnown RBP eCLIP15.85■□□□□ 0.13
SCARF1-209ENST00000576012 ANKS4BQ8N8V4 417 aa15.85■□□□□ 0.13
SCARF1-209ENST00000576012 ANKRD42Q8N9B4 389 aa15.85■□□□□ 0.13
SCARF1-209ENST00000576012 U2AF1L4Q8WU68 220 aaKnown RBP15.85■□□□□ 0.13
SCARF1-209ENST00000576012 COA7Q96BR5 231 aa15.85■□□□□ 0.13
SCARF1-209ENST00000576012 ARPP21Q9UBL0 812 aaPredicted RBP15.85■□□□□ 0.13
SCARF1-209ENST00000576012 COL4A3BPQ9Y5P4 624 aa15.85■□□□□ 0.13
SCARF1-209ENST00000576012 SPEF2Q9C093 1822 aa15.85■□□□□ 0.13
SCARF1-209ENST00000576012 KRT18P05783 430 aaKnown RBP15.85■□□□□ 0.13
SCARF1-209ENST00000576012 TNNI2P48788 182 aa15.85■□□□□ 0.13
SCARF1-209ENST00000576012 LRRC55Q6ZSA7 311 aa15.85■□□□□ 0.13
SCARF1-209ENST00000576012 ZNF571Q7Z3V5 609 aaPredicted RBP15.85■□□□□ 0.13
SCARF1-209ENST00000576012 TMC3Q7Z5M5 1100 aa15.85■□□□□ 0.13
SCARF1-209ENST00000576012 SLC17A8Q8NDX2 589 aa15.85■□□□□ 0.13
SCARF1-209ENST00000576012 ZBTB10Q96DT7 871 aa15.85■□□□□ 0.13
SCARF1-209ENST00000576012 OSGEPQ9NPF4 335 aa15.85■□□□□ 0.13
SCARF1-209ENST00000576012 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.85■□□□□ 0.13
SCARF1-209ENST00000576012 SAMD15Q9P1V8 674 aa15.85■□□□□ 0.13
SCARF1-209ENST00000576012 UTP11Q9Y3A2 253 aaKnown RBP15.85■□□□□ 0.13
SCARF1-209ENST00000576012 PKD1L3Q7Z443 1732 aa15.85■□□□□ 0.13
SCARF1-209ENST00000576012 ATXN2Q99700 1313 aaKnown RBP15.85■□□□□ 0.13
SCARF1-209ENST00000576012 IRF6O14896 467 aa15.85■□□□□ 0.13
SCARF1-209ENST00000576012 SLC37A4O43826 429 aa15.85■□□□□ 0.13
SCARF1-209ENST00000576012 ORC4O43929 436 aa15.85■□□□□ 0.13
SCARF1-209ENST00000576012 LCA5LO95447 670 aa15.85■□□□□ 0.13
SCARF1-209ENST00000576012 ALKBH5Q6P6C2 394 aaKnown RBP15.85■□□□□ 0.13
SCARF1-209ENST00000576012 MYOCDQ8IZQ8 938 aa15.85■□□□□ 0.13
SCARF1-209ENST00000576012 INTS9Q9NV88 658 aaKnown RBP15.85■□□□□ 0.13
SCARF1-209ENST00000576012 NIP7Q9Y221 180 aaKnown RBP eCLIP15.85■□□□□ 0.13
SCARF1-209ENST00000576012 STXBP3O00186 592 aa15.84■□□□□ 0.13
SCARF1-209ENST00000576012 FGFR4P22455 802 aa15.84■□□□□ 0.13
SCARF1-209ENST00000576012 CRYMQ14894 314 aa15.84■□□□□ 0.13
SCARF1-209ENST00000576012 CALCRLQ16602 461 aa15.84■□□□□ 0.13
SCARF1-209ENST00000576012 HERC4Q5GLZ8 1057 aaPredicted RBP15.84■□□□□ 0.13
SCARF1-209ENST00000576012 FMO2Q99518 471 aa15.84■□□□□ 0.13
SCARF1-209ENST00000576012 ANAPC4Q9UJX5 808 aa15.84■□□□□ 0.13
SCARF1-209ENST00000576012 SH3BP1Q9Y3L3 701 aa15.84■□□□□ 0.13
SCARF1-209ENST00000576012 FRMPD2Q68DX3 1309 aaPredicted RBP15.84■□□□□ 0.13
SCARF1-209ENST00000576012 F8VZ95 297 aa15.84■□□□□ 0.13
SCARF1-209ENST00000576012 UBOX5O94941 541 aa15.84■□□□□ 0.13
SCARF1-209ENST00000576012 CAVIN4Q5BKX8 364 aa15.84■□□□□ 0.13
SCARF1-209ENST00000576012 NEK8Q86SG6 692 aa15.84■□□□□ 0.13
SCARF1-209ENST00000576012 GDAP1Q8TB36 358 aa15.84■□□□□ 0.13
SCARF1-209ENST00000576012 RUBCNQ92622 972 aa15.84■□□□□ 0.13
SCARF1-209ENST00000576012 CEP72Q9P209 647 aa15.84■□□□□ 0.13
SCARF1-209ENST00000576012 RNF14Q9UBS8 474 aa15.84■□□□□ 0.13
SCARF1-209ENST00000576012 RTCBQ9Y3I0 505 aaKnown RBP15.84■□□□□ 0.13
SCARF1-209ENST00000576012 SSU72P8A0A1W2PR75 194 aa15.83■□□□□ 0.13
SCARF1-209ENST00000576012 FGFR1OPO95684 399 aaKnown RBP15.83■□□□□ 0.13
SCARF1-209ENST00000576012 XRCC4Q13426 336 aa15.83■□□□□ 0.13
SCARF1-209ENST00000576012 BIRC3Q13489 604 aa15.83■□□□□ 0.13
SCARF1-209ENST00000576012 ECM1Q16610 540 aa15.83■□□□□ 0.13
SCARF1-209ENST00000576012 SLC51AQ86UW1 340 aa15.83■□□□□ 0.13
SCARF1-209ENST00000576012 FMNL3Q8IVF7 1028 aa15.83■□□□□ 0.13
SCARF1-209ENST00000576012 CCDC50Q8IVM0 306 aa15.83■□□□□ 0.13
SCARF1-209ENST00000576012 EPS8L3Q8TE67 593 aaKnown RBP15.83■□□□□ 0.13
SCARF1-209ENST00000576012 PIGSQ96S52 555 aa15.83■□□□□ 0.13
SCARF1-209ENST00000576012 CRNKL1Q9BZJ0 848 aaKnown RBP15.83■□□□□ 0.13
SCARF1-209ENST00000576012 MAD2L2Q9UI95 211 aa15.83■□□□□ 0.13
SCARF1-209ENST00000576012 PTPN22Q9Y2R2 807 aa15.83■□□□□ 0.13
SCARF1-209ENST00000576012 E9PMD0 336 aa15.83■□□□□ 0.12
SCARF1-209ENST00000576012 SEMA3FQ13275 785 aa15.83■□□□□ 0.12
SCARF1-209ENST00000576012 DRP2Q13474 957 aa15.83■□□□□ 0.12
SCARF1-209ENST00000576012 SLC29A2Q14542 456 aa15.83■□□□□ 0.12
SCARF1-209ENST00000576012 LMBR1Q8WVP7 490 aa15.83■□□□□ 0.12
SCARF1-209ENST00000576012 PNMA5Q96PV4 448 aa15.83■□□□□ 0.12
SCARF1-209ENST00000576012 ATP6V0A4Q9HBG4 840 aa15.83■□□□□ 0.12
SCARF1-209ENST00000576012 TMOD4Q9NZQ9 345 aa15.83■□□□□ 0.12
SCARF1-209ENST00000576012 RGS16O15492 202 aaPredicted RBP15.83■□□□□ 0.12
SCARF1-209ENST00000576012 FKBP3Q00688 224 aaKnown RBP15.83■□□□□ 0.12
SCARF1-209ENST00000576012 ADAM9Q13443 819 aa15.83■□□□□ 0.12
SCARF1-209ENST00000576012 CUL1Q13616 776 aa15.83■□□□□ 0.12
SCARF1-209ENST00000576012 CCDC152Q4G0S7 254 aa15.83■□□□□ 0.12
SCARF1-209ENST00000576012 UNC13DQ70J99 1090 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms