RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 SH3GL3Q99963 347 aa15.73■□□□□ 0.11
SMG6-215ENST00000574501 EDEM3Q9BZQ6 932 aa15.73■□□□□ 0.11
SMG6-215ENST00000574501 SLC5A4Q9NY91 659 aa15.73■□□□□ 0.11
SMG6-215ENST00000574501 MYH4Q9Y623 1939 aa15.72■□□□□ 0.11
SMG6-215ENST00000574501 CFAP73A6NFT4 308 aa15.72■□□□□ 0.11
SMG6-215ENST00000574501 IGF2BP3O00425 579 aaKnown RBP eCLIP15.72■□□□□ 0.11
SMG6-215ENST00000574501 AP1G2O75843 785 aa15.72■□□□□ 0.11
SMG6-215ENST00000574501 THEMIS2Q5TEJ8 643 aa15.72■□□□□ 0.11
SMG6-215ENST00000574501 AP1ARQ63HQ0 302 aa15.72■□□□□ 0.11
SMG6-215ENST00000574501 TMED8Q6PL24 325 aaPredicted RBP15.72■□□□□ 0.11
SMG6-215ENST00000574501 MAEAQ7L5Y9 396 aa15.72■□□□□ 0.11
SMG6-215ENST00000574501 ECT2Q9H8V3 914 aa15.72■□□□□ 0.11
SMG6-215ENST00000574501 UTP11Q9Y3A2 253 aaKnown RBP15.72■□□□□ 0.11
SMG6-215ENST00000574501 ERVV-2B6SEH9 535 aa15.72■□□□□ 0.11
SMG6-215ENST00000574501 CES2O00748 559 aa15.72■□□□□ 0.11
SMG6-215ENST00000574501 RARAP10276 462 aa15.72■□□□□ 0.11
SMG6-215ENST00000574501 ATF3P18847 181 aa15.72■□□□□ 0.11
SMG6-215ENST00000574501 NCALDP61601 193 aa15.72■□□□□ 0.11
SMG6-215ENST00000574501 ADAT2Q7Z6V5 191 aaKnown RBP15.72■□□□□ 0.11
SMG6-215ENST00000574501 UHMK1Q8TAS1 419 aaKnown RBP15.72■□□□□ 0.11
SMG6-215ENST00000574501 ZCRB1Q8TBF4 217 aaKnown RBP15.72■□□□□ 0.11
SMG6-215ENST00000574501 FMO2Q99518 471 aa15.72■□□□□ 0.11
SMG6-215ENST00000574501 AZI2Q9H6S1 392 aa15.72■□□□□ 0.11
SMG6-215ENST00000574501 INTS9Q9NV88 658 aaKnown RBP15.72■□□□□ 0.11
SMG6-215ENST00000574501 AFF2P51816 1311 aa15.71■□□□□ 0.11
SMG6-215ENST00000574501 ALS2Q96Q42 1657 aa15.71■□□□□ 0.11
SMG6-215ENST00000574501 FAM170AA1A519 330 aa15.71■□□□□ 0.11
SMG6-215ENST00000574501 TRAF5O00463 557 aa15.71■□□□□ 0.11
SMG6-215ENST00000574501 KRT16P08779 473 aa15.71■□□□□ 0.11
SMG6-215ENST00000574501 COPB2P35606 906 aa15.71■□□□□ 0.11
SMG6-215ENST00000574501 PRPHP41219 470 aa15.71■□□□□ 0.11
SMG6-215ENST00000574501 PTK2Q05397 1052 aa15.71■□□□□ 0.11
SMG6-215ENST00000574501 ASIC2Q16515 512 aa15.71■□□□□ 0.11
SMG6-215ENST00000574501 COBLL1Q53SF7 1204 aa15.71■□□□□ 0.11
SMG6-215ENST00000574501 GUF1Q8N442 669 aaKnown RBP15.71■□□□□ 0.11
SMG6-215ENST00000574501 CCDC26Q8TAB7 109 aa15.71■□□□□ 0.11
SMG6-215ENST00000574501 SYN2Q92777 582 aaPredicted RBP15.71■□□□□ 0.11
SMG6-215ENST00000574501 CALR3Q96L12 384 aaKnown RBP15.71■□□□□ 0.11
SMG6-215ENST00000574501 AK8Q96MA6 479 aa15.71■□□□□ 0.11
SMG6-215ENST00000574501 NUCKS1Q9H1E3 243 aaKnown RBP15.71■□□□□ 0.11
SMG6-215ENST00000574501 THRAP3Q9Y2W1 955 aaKnown RBP15.71■□□□□ 0.11
SMG6-215ENST00000574501 NR2E1Q9Y466 385 aa15.71■□□□□ 0.11
SMG6-215ENST00000574501 MMP13P45452 471 aa15.7■□□□□ 0.1
SMG6-215ENST00000574501 ICA1Q05084 483 aa15.7■□□□□ 0.1
SMG6-215ENST00000574501 LRRC63Q05C16 580 aa15.7■□□□□ 0.1
SMG6-215ENST00000574501 UBAP2Q5T6F2 1119 aaKnown RBP15.7■□□□□ 0.1
SMG6-215ENST00000574501 UNC13DQ70J99 1090 aa15.7■□□□□ 0.1
SMG6-215ENST00000574501 DAAM2Q86T65 1068 aa15.7■□□□□ 0.1
SMG6-215ENST00000574501 LRRC57Q8N9N7 239 aa15.7■□□□□ 0.1
SMG6-215ENST00000574501 KCNV2Q8TDN2 545 aa15.7■□□□□ 0.1
SMG6-215ENST00000574501 CALML4Q96GE6 196 aa15.7■□□□□ 0.1
SMG6-215ENST00000574501 CCDC113Q9H0I3 377 aa15.7■□□□□ 0.1
SMG6-215ENST00000574501 ARHGEF10LQ9HCE6 1279 aa15.7■□□□□ 0.1
SMG6-215ENST00000574501 COL4A3BPQ9Y5P4 624 aa15.7■□□□□ 0.1
SMG6-215ENST00000574501 ABCB11O95342 1321 aa15.7■□□□□ 0.1
SMG6-215ENST00000574501 KLHL33A6NCF5 533 aa15.7■□□□□ 0.1
SMG6-215ENST00000574501 TSPY2A6NKD2 308 aa15.7■□□□□ 0.1
SMG6-215ENST00000574501 LAD1O00515 517 aa15.7■□□□□ 0.1
SMG6-215ENST00000574501 HGSO14964 777 aaPredicted RBP15.7■□□□□ 0.1
SMG6-215ENST00000574501 CYP2D6P10635 497 aa15.7■□□□□ 0.1
SMG6-215ENST00000574501 ALADP13716 330 aa15.7■□□□□ 0.1
SMG6-215ENST00000574501 KIF5BP33176 963 aa15.7■□□□□ 0.1
SMG6-215ENST00000574501 TXKP42681 527 aa15.7■□□□□ 0.1
SMG6-215ENST00000574501 ADCY2Q08462 1091 aa15.7■□□□□ 0.1
SMG6-215ENST00000574501 PEX26Q7Z412 305 aa15.7■□□□□ 0.1
SMG6-215ENST00000574501 HOOK3Q86VS8 718 aa15.7■□□□□ 0.1
SMG6-215ENST00000574501 DZIP3Q86Y13 1208 aaKnown RBP15.7■□□□□ 0.1
SMG6-215ENST00000574501 EPB41L4BQ9H329 900 aa15.7■□□□□ 0.1
SMG6-215ENST00000574501 BLOC1S4Q9NUP1 217 aa15.7■□□□□ 0.1
SMG6-215ENST00000574501 CCDC188H7C350 402 aa15.69■□□□□ 0.1
SMG6-215ENST00000574501 PPFIA2O75334 1257 aa15.69■□□□□ 0.1
SMG6-215ENST00000574501 ZBTB48P10074 688 aaPredicted RBP15.69■□□□□ 0.1
SMG6-215ENST00000574501 ABL2P42684 1182 aa15.69■□□□□ 0.1
SMG6-215ENST00000574501 SLCO1A2P46721 670 aa15.69■□□□□ 0.1
SMG6-215ENST00000574501 EIF3BP55884 814 aaKnown RBP15.69■□□□□ 0.1
SMG6-215ENST00000574501 ZNF571Q7Z3V5 609 aaPredicted RBP15.69■□□□□ 0.1
SMG6-215ENST00000574501 ATP8B4Q8TF62 1192 aa15.69■□□□□ 0.1
SMG6-215ENST00000574501 TSG101Q99816 390 aa15.69■□□□□ 0.1
SMG6-215ENST00000574501 SH3GLB2Q9NR46 395 aa15.69■□□□□ 0.1
SMG6-215ENST00000574501 FAM114A2Q9NRY5 505 aa15.69■□□□□ 0.1
SMG6-215ENST00000574501 TRIM33Q9UPN9 1127 aa15.69■□□□□ 0.1
SMG6-215ENST00000574501 WTIPA6NIX2 430 aaPredicted RBP15.69■□□□□ 0.1
SMG6-215ENST00000574501 SPDYE3A6NKU9 549 aa15.69■□□□□ 0.1
SMG6-215ENST00000574501 RGS16O15492 202 aaPredicted RBP15.69■□□□□ 0.1
SMG6-215ENST00000574501 FGRP09769 529 aa15.69■□□□□ 0.1
SMG6-215ENST00000574501 ACTN1P12814 892 aa15.69■□□□□ 0.1
SMG6-215ENST00000574501 CCND1P24385 295 aa15.69■□□□□ 0.1
SMG6-215ENST00000574501 GRB10Q13322 594 aa15.69■□□□□ 0.1
SMG6-215ENST00000574501 SLC35G1Q2M3R5 365 aa15.69■□□□□ 0.1
SMG6-215ENST00000574501 TBC1D7Q9P0N9 293 aa15.69■□□□□ 0.1
SMG6-215ENST00000574501 CORO1CQ9ULV4 474 aaPredicted RBP15.69■□□□□ 0.1
SMG6-215ENST00000574501 PCDH11XQ9BZA7 1347 aa15.69■□□□□ 0.1
SMG6-215ENST00000574501 PCDH11YQ9BZA8 1340 aa15.69■□□□□ 0.1
SMG6-215ENST00000574501 PLCH1Q4KWH8 1693 aa15.68■□□□□ 0.1
SMG6-215ENST00000574501 EVI5O60447 810 aa15.68■□□□□ 0.1
SMG6-215ENST00000574501 LINGO3P0C6S8 592 aa15.68■□□□□ 0.1
SMG6-215ENST00000574501 MYBL1P10243 752 aa15.68■□□□□ 0.1
SMG6-215ENST00000574501 SNX1Q13596 522 aa15.68■□□□□ 0.1
SMG6-215ENST00000574501 CCDC38Q502W7 563 aa15.68■□□□□ 0.1
SMG6-215ENST00000574501 ANKRD20A2Q5SQ80 823 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms