RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 SMARCAD1Q9H4L7 1026 aa12.91□□□□□ -0.34
RPAIN-214ENST00000574003 PDRG1Q9NUG6 133 aa12.91□□□□□ -0.34
RPAIN-214ENST00000574003 CYP46A1Q9Y6A2 500 aa12.91□□□□□ -0.34
RPAIN-214ENST00000574003 NRCAMQ92823 1304 aa12.9□□□□□ -0.34
RPAIN-214ENST00000574003 SIP14410 1827 aa12.9□□□□□ -0.34
RPAIN-214ENST00000574003 ABHD14A-ACY1A0A1B0GW23 586 aa12.9□□□□□ -0.34
RPAIN-214ENST00000574003 ESYT2A0FGR8 921 aa12.9□□□□□ -0.34
RPAIN-214ENST00000574003 MAFGO15525 162 aa12.9□□□□□ -0.34
RPAIN-214ENST00000574003 GHRP10912 638 aa12.9□□□□□ -0.34
RPAIN-214ENST00000574003 GNAT1P11488 350 aa12.9□□□□□ -0.34
RPAIN-214ENST00000574003 IFNAR1P17181 557 aa12.9□□□□□ -0.34
RPAIN-214ENST00000574003 MKRN4PQ13434 485 aaPredicted RBP12.9□□□□□ -0.34
RPAIN-214ENST00000574003 IKBKEQ14164 716 aa12.9□□□□□ -0.34
RPAIN-214ENST00000574003 PLCB4Q15147 1175 aa12.9□□□□□ -0.34
RPAIN-214ENST00000574003 PLEKHG4Q58EX7 1191 aa12.9□□□□□ -0.34
RPAIN-214ENST00000574003 MYOCDQ8IZQ8 938 aa12.9□□□□□ -0.34
RPAIN-214ENST00000574003 REXO1Q8N1G1 1221 aaKnown RBP12.9□□□□□ -0.34
RPAIN-214ENST00000574003 DNAJB3Q8WWF6 145 aa12.9□□□□□ -0.34
RPAIN-214ENST00000574003 GJA10Q969M2 543 aa12.9□□□□□ -0.34
RPAIN-214ENST00000574003 ZBED2Q9BTP6 218 aa12.9□□□□□ -0.34
RPAIN-214ENST00000574003 RNF26Q9BY78 433 aaPredicted RBP12.9□□□□□ -0.34
RPAIN-214ENST00000574003 FAM49AQ9H0Q0 323 aaPredicted RBP12.9□□□□□ -0.34
RPAIN-214ENST00000574003 C6orf50Q9HD87 102 aa12.9□□□□□ -0.34
RPAIN-214ENST00000574003 ERAP1Q9NZ08 941 aa12.9□□□□□ -0.34
RPAIN-214ENST00000574003 MTUS1Q9ULD2 1270 aa12.9□□□□□ -0.34
RPAIN-214ENST00000574003 TRPC6Q9Y210 931 aa12.9□□□□□ -0.34
RPAIN-214ENST00000574003 NFASCO94856 1347 aa12.89□□□□□ -0.35
RPAIN-214ENST00000574003 VCANP13611 3396 aa12.89□□□□□ -0.35
RPAIN-214ENST00000574003 KIF28PB7ZC32 967 aa12.89□□□□□ -0.35
RPAIN-214ENST00000574003 DHX15O43143 795 aaKnown RBP12.89□□□□□ -0.35
RPAIN-214ENST00000574003 GJB5O95377 273 aa12.89□□□□□ -0.35
RPAIN-214ENST00000574003 PARNO95453 639 aaKnown RBP12.89□□□□□ -0.35
RPAIN-214ENST00000574003 STAT5BP51692 787 aa12.89□□□□□ -0.35
RPAIN-214ENST00000574003 MGAT3Q09327 533 aa12.89□□□□□ -0.35
RPAIN-214ENST00000574003 TMEM62Q0P6H9 643 aa12.89□□□□□ -0.35
RPAIN-214ENST00000574003 PRR16Q569H4 304 aa12.89□□□□□ -0.35
RPAIN-214ENST00000574003 FAM26DQ5JW98 314 aa12.89□□□□□ -0.35
RPAIN-214ENST00000574003 TRMT1LQ7Z2T5 733 aaKnown RBP12.89□□□□□ -0.35
RPAIN-214ENST00000574003 GLT8D2Q9H1C3 349 aa12.89□□□□□ -0.35
RPAIN-214ENST00000574003 TUBE1Q9UJT0 475 aa12.89□□□□□ -0.35
RPAIN-214ENST00000574003 TTC28Q96AY4 2481 aa12.89□□□□□ -0.35
RPAIN-214ENST00000574003 EMSYQ7Z589 1322 aa12.88□□□□□ -0.35
RPAIN-214ENST00000574003 LOXHD1Q8IVV2 1947 aa12.88□□□□□ -0.35
RPAIN-214ENST00000574003 MYO7AQ13402 2215 aa12.88□□□□□ -0.35
RPAIN-214ENST00000574003 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.88□□□□□ -0.35
RPAIN-214ENST00000574003 MBLAC1A4D2B0 266 aaPredicted RBP12.88□□□□□ -0.35
RPAIN-214ENST00000574003 UPP2O95045 317 aa12.88□□□□□ -0.35
RPAIN-214ENST00000574003 ATG7O95352 703 aa12.88□□□□□ -0.35
RPAIN-214ENST00000574003 CYP3A4P08684 503 aa12.88□□□□□ -0.35
RPAIN-214ENST00000574003 NLRP5P59047 1200 aa12.88□□□□□ -0.35
RPAIN-214ENST00000574003 SSRP1Q08945 709 aaKnown RBP12.88□□□□□ -0.35
RPAIN-214ENST00000574003 ABHD15Q6UXT9 468 aa12.88□□□□□ -0.35
RPAIN-214ENST00000574003 CCDC60Q8IWA6 550 aaPredicted RBP12.88□□□□□ -0.35
RPAIN-214ENST00000574003 GDPD5Q8WTR4 605 aa12.88□□□□□ -0.35
RPAIN-214ENST00000574003 SEPT8Q92599 483 aa12.88□□□□□ -0.35
RPAIN-214ENST00000574003 TM6SF1Q9BZW5 370 aa12.88□□□□□ -0.35
RPAIN-214ENST00000574003 AZI2Q9H6S1 392 aa12.88□□□□□ -0.35
RPAIN-214ENST00000574003 GJB4Q9NTQ9 266 aa12.88□□□□□ -0.35
RPAIN-214ENST00000574003 CDY2AQ9Y6F7 541 aa12.88□□□□□ -0.35
RPAIN-214ENST00000574003 BRWD1Q9NSI6 2320 aa12.88□□□□□ -0.35
RPAIN-214ENST00000574003 EVPLQ92817 2033 aa12.88□□□□□ -0.35
RPAIN-214ENST00000574003 SPTBN5Q9NRC6 3674 aaKnown RBP12.87□□□□□ -0.35
RPAIN-214ENST00000574003 LINC01553A4QN01 128 aa12.87□□□□□ -0.35
RPAIN-214ENST00000574003 IPO5O00410 1097 aaKnown RBP12.87□□□□□ -0.35
RPAIN-214ENST00000574003 BACH1O14867 736 aa12.87□□□□□ -0.35
RPAIN-214ENST00000574003 EPB41L2O43491 1005 aaKnown RBP12.87□□□□□ -0.35
RPAIN-214ENST00000574003 LPXNO60711 386 aa12.87□□□□□ -0.35
RPAIN-214ENST00000574003 SEC24BO95487 1268 aa12.87□□□□□ -0.35
RPAIN-214ENST00000574003 ATP4AP20648 1035 aa12.87□□□□□ -0.35
RPAIN-214ENST00000574003 GNA11P29992 359 aa12.87□□□□□ -0.35
RPAIN-214ENST00000574003 SCRN1Q12765 414 aa12.87□□□□□ -0.35
RPAIN-214ENST00000574003 GRB10Q13322 594 aa12.87□□□□□ -0.35
RPAIN-214ENST00000574003 LPIN1Q14693 890 aa12.87□□□□□ -0.35
RPAIN-214ENST00000574003 SWSAP1Q6NVH7 229 aa12.87□□□□□ -0.35
RPAIN-214ENST00000574003 NIPA1Q7RTP0 329 aa12.87□□□□□ -0.35
RPAIN-214ENST00000574003 CCDC12Q8WUD4 166 aaPredicted RBP12.87□□□□□ -0.35
RPAIN-214ENST00000574003 LENG9Q96B70 501 aa12.87□□□□□ -0.35
RPAIN-214ENST00000574003 ZNF274Q96GC6 653 aaPredicted RBP12.87□□□□□ -0.35
RPAIN-214ENST00000574003 PPP1R16BQ96T49 567 aa12.87□□□□□ -0.35
RPAIN-214ENST00000574003 RAD9AQ99638 391 aa12.87□□□□□ -0.35
RPAIN-214ENST00000574003 ZNF577Q9BSK1 485 aa12.87□□□□□ -0.35
RPAIN-214ENST00000574003 AGO3Q9H9G7 860 aaKnown RBP12.87□□□□□ -0.35
RPAIN-214ENST00000574003 TPCN1Q9ULQ1 816 aa12.87□□□□□ -0.35
RPAIN-214ENST00000574003 KCNJ14Q9UNX9 436 aa12.87□□□□□ -0.35
RPAIN-214ENST00000574003 MTCH2Q9Y6C9 303 aa12.87□□□□□ -0.35
RPAIN-214ENST00000574003 REV3LO60673 3130 aa12.87□□□□□ -0.35
RPAIN-214ENST00000574003 COL4A4P53420 1690 aaPredicted RBP12.86□□□□□ -0.35
RPAIN-214ENST00000574003 IGKV6D-21A0A0A0MT36 114 aa12.86□□□□□ -0.35
RPAIN-214ENST00000574003 POTEB3A0JP26 581 aa12.86□□□□□ -0.35
RPAIN-214ENST00000574003 CPLX1O14810 134 aa12.86□□□□□ -0.35
RPAIN-214ENST00000574003 CAND2O75155 1236 aa12.86□□□□□ -0.35
RPAIN-214ENST00000574003 AMHP03971 560 aa12.86□□□□□ -0.35
RPAIN-214ENST00000574003 MRPS6P82932 125 aaKnown RBP12.86□□□□□ -0.35
RPAIN-214ENST00000574003 NPY5RQ15761 445 aa12.86□□□□□ -0.35
RPAIN-214ENST00000574003 PDXDC2PQ6P474 469 aa12.86□□□□□ -0.35
RPAIN-214ENST00000574003 POTEBQ6S5H4 581 aa12.86□□□□□ -0.35
RPAIN-214ENST00000574003 PLPPR4Q7Z2D5 763 aa12.86□□□□□ -0.35
RPAIN-214ENST00000574003 TRIM22Q8IYM9 498 aa12.86□□□□□ -0.35
RPAIN-214ENST00000574003 CCDC148Q8NFR7 591 aa12.86□□□□□ -0.35
RPAIN-214ENST00000574003 C17orf80Q9BSJ5 609 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms