RNA–Protein interactions for RNA: ENST00000573903.1

CCDC40-210, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 561 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-210ENST00000573903 RUFY4Q6ZNE9 571 aa13.94□□□□□ -0.18
CCDC40-210ENST00000573903 DNAJB3Q8WWF6 145 aa13.94□□□□□ -0.18
CCDC40-210ENST00000573903 C11orf84Q9BUA3 381 aaPredicted RBP13.94□□□□□ -0.18
CCDC40-210ENST00000573903 LRRC2Q9BYS8 371 aa13.94□□□□□ -0.18
CCDC40-210ENST00000573903 OSBPL7Q9BZF2 842 aa13.94□□□□□ -0.18
CCDC40-210ENST00000573903 EPHX3Q9H6B9 360 aa13.94□□□□□ -0.18
CCDC40-210ENST00000573903 SLC9A2Q9UBY0 812 aa13.94□□□□□ -0.18
CCDC40-210ENST00000573903 TRPC6Q9Y210 931 aa13.94□□□□□ -0.18
CCDC40-210ENST00000573903 CDY2AQ9Y6F7 541 aa13.94□□□□□ -0.18
CCDC40-210ENST00000573903 RBAK-RBAKDNI3L0D1 243 aa13.93□□□□□ -0.18
CCDC40-210ENST00000573903 RB1P06400 928 aa13.93□□□□□ -0.18
CCDC40-210ENST00000573903 MRPS6P82932 125 aaKnown RBP13.93□□□□□ -0.18
CCDC40-210ENST00000573903 MGAT3Q09327 533 aa13.93□□□□□ -0.18
CCDC40-210ENST00000573903 LPIN1Q14693 890 aa13.93□□□□□ -0.18
CCDC40-210ENST00000573903 NECTIN1Q15223 517 aa13.93□□□□□ -0.18
CCDC40-210ENST00000573903 IER5Q5VY09 327 aa13.93□□□□□ -0.18
CCDC40-210ENST00000573903 PPP1R18Q6NYC8 613 aa13.93□□□□□ -0.18
CCDC40-210ENST00000573903 TSHZ1Q6ZSZ6 1077 aa13.93□□□□□ -0.18
CCDC40-210ENST00000573903 SGMS1Q86VZ5 419 aa13.93□□□□□ -0.18
CCDC40-210ENST00000573903 TEX2Q8IWB9 1127 aa13.93□□□□□ -0.18
CCDC40-210ENST00000573903 LMAN2LQ9H0V9 348 aa13.93□□□□□ -0.18
CCDC40-210ENST00000573903 CNTNAP5Q8WYK1 1306 aa13.92□□□□□ -0.18
CCDC40-210ENST00000573903 MBLAC1A4D2B0 266 aaPredicted RBP13.92□□□□□ -0.18
CCDC40-210ENST00000573903 hCG_1984214I3L0E3 225 aa13.92□□□□□ -0.18
CCDC40-210ENST00000573903 NCK2O43639 380 aa13.92□□□□□ -0.18
CCDC40-210ENST00000573903 FOSP01100 380 aaPredicted RBP13.92□□□□□ -0.18
CCDC40-210ENST00000573903 PLA2G5P39877 138 aa13.92□□□□□ -0.18
CCDC40-210ENST00000573903 ADCY7P51828 1080 aa13.92□□□□□ -0.18
CCDC40-210ENST00000573903 BTG3Q14201 252 aaPredicted RBP13.92□□□□□ -0.18
CCDC40-210ENST00000573903 RTN1Q16799 776 aa13.92□□□□□ -0.18
CCDC40-210ENST00000573903 TCEAL5Q5H9L2 206 aa13.92□□□□□ -0.18
CCDC40-210ENST00000573903 FBXO47Q5MNV8 452 aa13.92□□□□□ -0.18
CCDC40-210ENST00000573903 APOA5Q6Q788 366 aa13.92□□□□□ -0.18
CCDC40-210ENST00000573903 FAM178BQ8IXR5 827 aa13.92□□□□□ -0.18
CCDC40-210ENST00000573903 GJD3Q8N144 294 aa13.92□□□□□ -0.18
CCDC40-210ENST00000573903 ZNF713Q8N859 430 aaPredicted RBP13.92□□□□□ -0.18
CCDC40-210ENST00000573903 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.92□□□□□ -0.18
CCDC40-210ENST00000573903 PABPC5Q96DU9 382 aaKnown RBP13.92□□□□□ -0.18
CCDC40-210ENST00000573903 NEK1Q96PY6 1258 aa13.92□□□□□ -0.18
CCDC40-210ENST00000573903 MXRA8Q9BRK3 442 aa13.92□□□□□ -0.18
CCDC40-210ENST00000573903 LRFN3Q9BTN0 628 aa13.92□□□□□ -0.18
CCDC40-210ENST00000573903 FTHL17Q9BXU8 183 aa13.92□□□□□ -0.18
CCDC40-210ENST00000573903 FAM49AQ9H0Q0 323 aaPredicted RBP13.92□□□□□ -0.18
CCDC40-210ENST00000573903 GLT8D2Q9H1C3 349 aa13.92□□□□□ -0.18
CCDC40-210ENST00000573903 KCNH7Q9NS40 1196 aa13.92□□□□□ -0.18
CCDC40-210ENST00000573903 NFASCO94856 1347 aa13.91□□□□□ -0.18
CCDC40-210ENST00000573903 C5orf67F2Z3F1 127 aa13.91□□□□□ -0.18
CCDC40-210ENST00000573903 H3BQ06 376 aaPredicted RBP13.91□□□□□ -0.18
CCDC40-210ENST00000573903 ZBTB43O43298 467 aa13.91□□□□□ -0.18
CCDC40-210ENST00000573903 INSRRP14616 1297 aa13.91□□□□□ -0.18
CCDC40-210ENST00000573903 IL9P15248 144 aa13.91□□□□□ -0.18
CCDC40-210ENST00000573903 ZNF76P36508 570 aa13.91□□□□□ -0.18
CCDC40-210ENST00000573903 WWC2Q6AWC2 1192 aa13.91□□□□□ -0.18
CCDC40-210ENST00000573903 ANO3Q9BYT9 981 aa13.91□□□□□ -0.18
CCDC40-210ENST00000573903 RIC8AQ9NPQ8 531 aa13.91□□□□□ -0.18
CCDC40-210ENST00000573903 CLDND1Q9NY35 253 aa13.91□□□□□ -0.18
CCDC40-210ENST00000573903 TRPV2Q9Y5S1 764 aa13.91□□□□□ -0.18
CCDC40-210ENST00000573903 SQORQ9Y6N5 450 aa13.91□□□□□ -0.18
CCDC40-210ENST00000573903 BRWD1Q9NSI6 2320 aa13.91□□□□□ -0.18
CCDC40-210ENST00000573903 GRXCR2A6NFK2 248 aa13.9□□□□□ -0.18
CCDC40-210ENST00000573903 GOLGA8AA7E2F4 631 aa13.9□□□□□ -0.18
CCDC40-210ENST00000573903 GOLGA8BA8MQT2 603 aa13.9□□□□□ -0.18
CCDC40-210ENST00000573903 ENPP3O14638 875 aa13.9□□□□□ -0.18
CCDC40-210ENST00000573903 GPR37L1O60883 481 aa13.9□□□□□ -0.18
CCDC40-210ENST00000573903 STAG3L1P0CL83 205 aa13.9□□□□□ -0.18
CCDC40-210ENST00000573903 CD52P31358 61 aa13.9□□□□□ -0.18
CCDC40-210ENST00000573903 BMPR1AP36894 532 aa13.9□□□□□ -0.18
CCDC40-210ENST00000573903 SLC26A2P50443 739 aa13.9□□□□□ -0.18
CCDC40-210ENST00000573903 STAT5BP51692 787 aa13.9□□□□□ -0.18
CCDC40-210ENST00000573903 ACTR2P61160 394 aa13.9□□□□□ -0.18
CCDC40-210ENST00000573903 FGD1P98174 961 aa13.9□□□□□ -0.18
CCDC40-210ENST00000573903 PAK2Q13177 524 aa13.9□□□□□ -0.18
CCDC40-210ENST00000573903 AP3B2Q13367 1082 aa13.9□□□□□ -0.18
CCDC40-210ENST00000573903 CEP55Q53EZ4 464 aa13.9□□□□□ -0.18
CCDC40-210ENST00000573903 MARCH8Q5T0T0 291 aa13.9□□□□□ -0.18
CCDC40-210ENST00000573903 PLPPR4Q7Z2D5 763 aa13.9□□□□□ -0.18
CCDC40-210ENST00000573903 SKAP1Q86WV1 359 aa13.9□□□□□ -0.18
CCDC40-210ENST00000573903 NEK9Q8TD19 979 aa13.9□□□□□ -0.18
CCDC40-210ENST00000573903 PPP2R3CQ969Q6 453 aa13.9□□□□□ -0.18
CCDC40-210ENST00000573903 NAP1L2Q9ULW6 460 aaPredicted RBP13.9□□□□□ -0.18
CCDC40-210ENST00000573903 TTC3P53804 2025 aa13.9□□□□□ -0.18
CCDC40-210ENST00000573903 PI4K2BG5E9Z4 385 aa13.89□□□□□ -0.19
CCDC40-210ENST00000573903 BACH1O14867 736 aa13.89□□□□□ -0.19
CCDC40-210ENST00000573903 CDC45O75419 566 aa13.89□□□□□ -0.19
CCDC40-210ENST00000573903 ALADP13716 330 aa13.89□□□□□ -0.19
CCDC40-210ENST00000573903 KRT32Q14532 448 aa13.89□□□□□ -0.19
CCDC40-210ENST00000573903 PLCB4Q15147 1175 aa13.89□□□□□ -0.19
CCDC40-210ENST00000573903 FAM160B1Q5W0V3 765 aa13.89□□□□□ -0.19
CCDC40-210ENST00000573903 DHX32Q7L7V1 743 aaKnown RBP13.89□□□□□ -0.19
CCDC40-210ENST00000573903 NPAS4Q8IUM7 802 aa13.89□□□□□ -0.19
CCDC40-210ENST00000573903 CLP1Q92989 425 aaKnown RBP13.89□□□□□ -0.19
CCDC40-210ENST00000573903 PGBD1Q96JS3 809 aa13.89□□□□□ -0.19
CCDC40-210ENST00000573903 PCYT2Q99447 389 aa13.89□□□□□ -0.19
CCDC40-210ENST00000573903 PLVAPQ9BX97 442 aa13.89□□□□□ -0.19
CCDC40-210ENST00000573903 TCEAL9Q9UHQ7 104 aa13.89□□□□□ -0.19
CCDC40-210ENST00000573903 LRFN2Q9ULH4 789 aa13.89□□□□□ -0.19
CCDC40-210ENST00000573903 ARIH1Q9Y4X5 557 aaPredicted RBP13.89□□□□□ -0.19
CCDC40-210ENST00000573903 PCDHA2Q9Y5H9 948 aa13.89□□□□□ -0.19
CCDC40-210ENST00000573903 LOXHD1Q8IVV2 1947 aa13.89□□□□□ -0.19
CCDC40-210ENST00000573903 ATG2AQ2TAZ0 1938 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms