RNA–Protein interactions for RNA: ENST00000572967.1

NDE1-206, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-206ENST00000572967 ZSCAN16Q9H4T2 348 aaPredicted RBP13.45□□□□□ -0.26
NDE1-206ENST00000572967 TUT1Q9H6E5 874 aaKnown RBP13.45□□□□□ -0.26
NDE1-206ENST00000572967 RIC8AQ9NPQ8 531 aa13.45□□□□□ -0.26
NDE1-206ENST00000572967 PCDHA4Q9UN74 947 aa13.45□□□□□ -0.26
NDE1-206ENST00000572967 PCDHA11Q9Y5I1 949 aa13.45□□□□□ -0.26
NDE1-206ENST00000572967 NLRC5Q86WI3 1866 aa13.44□□□□□ -0.26
NDE1-206ENST00000572967 SPATA31C2B4DYI2 1134 aa13.44□□□□□ -0.26
NDE1-206ENST00000572967 PPFIA4O75335 1185 aa13.44□□□□□ -0.26
NDE1-206ENST00000572967 BAIAP3O94812 1187 aa13.44□□□□□ -0.26
NDE1-206ENST00000572967 ARHGEF15O94989 841 aa13.44□□□□□ -0.26
NDE1-206ENST00000572967 CTSHP09668 335 aa13.44□□□□□ -0.26
NDE1-206ENST00000572967 IGFBP4P22692 258 aa13.44□□□□□ -0.26
NDE1-206ENST00000572967 WDR5P61964 334 aaKnown RBP13.44□□□□□ -0.26
NDE1-206ENST00000572967 DEFB103AP81534 67 aa13.44□□□□□ -0.26
NDE1-206ENST00000572967 ADGRE1Q14246 886 aa13.44□□□□□ -0.26
NDE1-206ENST00000572967 GPNMBQ14956 572 aa13.44□□□□□ -0.26
NDE1-206ENST00000572967 MCTP1Q6DN14 999 aa13.44□□□□□ -0.26
NDE1-206ENST00000572967 KRT25Q7Z3Z0 450 aa13.44□□□□□ -0.26
NDE1-206ENST00000572967 DIS3L2Q8IYB7 885 aaKnown RBP13.44□□□□□ -0.26
NDE1-206ENST00000572967 BLIDQ8IZY5 108 aa13.44□□□□□ -0.26
NDE1-206ENST00000572967 MICALL1Q8N3F8 863 aa13.44□□□□□ -0.26
NDE1-206ENST00000572967 ATP6V0A1Q93050 837 aa13.44□□□□□ -0.26
NDE1-206ENST00000572967 CERS4Q9HA82 394 aa13.44□□□□□ -0.26
NDE1-206ENST00000572967 PRDM6Q9NQX0 595 aa13.44□□□□□ -0.26
NDE1-206ENST00000572967 ZNF215Q9UL58 517 aaPredicted RBP13.44□□□□□ -0.26
NDE1-206ENST00000572967 EYSQ5T1H1 3165 aa13.44□□□□□ -0.26
NDE1-206ENST00000572967 CCDC194A0A1B0GVG4 234 aa13.43□□□□□ -0.26
NDE1-206ENST00000572967 ZSCAN22P10073 491 aaPredicted RBP13.43□□□□□ -0.26
NDE1-206ENST00000572967 KCNA2P16389 499 aa13.43□□□□□ -0.26
NDE1-206ENST00000572967 ITGB5P18084 799 aa13.43□□□□□ -0.26
NDE1-206ENST00000572967 MARK3P27448 753 aa13.43□□□□□ -0.26
NDE1-206ENST00000572967 THPOP40225 353 aa13.43□□□□□ -0.26
NDE1-206ENST00000572967 FOSBP53539 338 aa13.43□□□□□ -0.26
NDE1-206ENST00000572967 MYO9BQ13459 2157 aa13.43□□□□□ -0.26
NDE1-206ENST00000572967 MTMR1Q13613 665 aa13.43□□□□□ -0.26
NDE1-206ENST00000572967 MBTPS1Q14703 1052 aa13.43□□□□□ -0.26
NDE1-206ENST00000572967 CNKSR3Q6P9H4 555 aa13.43□□□□□ -0.26
NDE1-206ENST00000572967 TRAF7Q6Q0C0 670 aa13.43□□□□□ -0.26
NDE1-206ENST00000572967 SERINC5Q86VE9 423 aa13.43□□□□□ -0.26
NDE1-206ENST00000572967 HERC6Q8IVU3 1022 aa13.43□□□□□ -0.26
NDE1-206ENST00000572967 GPRASP2Q96D09 838 aa13.43□□□□□ -0.26
NDE1-206ENST00000572967 AIFM3Q96NN9 605 aa13.43□□□□□ -0.26
NDE1-206ENST00000572967 NAP1L4Q99733 375 aaKnown RBP13.43□□□□□ -0.26
NDE1-206ENST00000572967 COL25A1Q9BXS0 654 aaPredicted RBP13.43□□□□□ -0.26
NDE1-206ENST00000572967 NOL7Q9UMY1 257 aaKnown RBP13.43□□□□□ -0.26
NDE1-206ENST00000572967 PCDHA6Q9UN73 950 aa13.43□□□□□ -0.26
NDE1-206ENST00000572967 PCDHA8Q9Y5H6 950 aa13.43□□□□□ -0.26
NDE1-206ENST00000572967 LOXHD1Q8IVV2 1947 aa13.43□□□□□ -0.26
NDE1-206ENST00000572967 EPOPA6NHQ4 379 aa13.42□□□□□ -0.26
NDE1-206ENST00000572967 TREHO43280 583 aa13.42□□□□□ -0.26
NDE1-206ENST00000572967 ATP9AO75110 1047 aa13.42□□□□□ -0.26
NDE1-206ENST00000572967 CXCL10P02778 98 aa13.42□□□□□ -0.26
NDE1-206ENST00000572967 HOXC8P31273 242 aa13.42□□□□□ -0.26
NDE1-206ENST00000572967 TCF7P36402 384 aaPredicted RBP13.42□□□□□ -0.26
NDE1-206ENST00000572967 ARHGAP4P98171 946 aa13.42□□□□□ -0.26
NDE1-206ENST00000572967 CCDC85BQ15834 202 aaPredicted RBP13.42□□□□□ -0.26
NDE1-206ENST00000572967 XRRA1Q6P2D8 792 aa13.42□□□□□ -0.26
NDE1-206ENST00000572967 SPRED2Q7Z698 418 aa13.42□□□□□ -0.26
NDE1-206ENST00000572967 LMBR1Q8WVP7 490 aa13.42□□□□□ -0.26
NDE1-206ENST00000572967 ANO3Q9BYT9 981 aa13.42□□□□□ -0.26
NDE1-206ENST00000572967 SETD4Q9NVD3 440 aa13.42□□□□□ -0.26
NDE1-206ENST00000572967 KCNJ14Q9UNX9 436 aa13.42□□□□□ -0.26
NDE1-206ENST00000572967 MTMR6Q9Y217 621 aa13.42□□□□□ -0.26
NDE1-206ENST00000572967 UBIAD1Q9Y5Z9 338 aa13.42□□□□□ -0.26
NDE1-206ENST00000572967 LCHNA4D1U4 455 aa13.41□□□□□ -0.26
NDE1-206ENST00000572967 TLL1O43897 1013 aa13.41□□□□□ -0.26
NDE1-206ENST00000572967 PARNO95453 639 aaKnown RBP13.41□□□□□ -0.26
NDE1-206ENST00000572967 TRAPPC10P48553 1259 aa13.41□□□□□ -0.26
NDE1-206ENST00000572967 GUCY1B3Q02153 619 aa13.41□□□□□ -0.26
NDE1-206ENST00000572967 NONOQ15233 471 aaKnown RBP eCLIP13.41□□□□□ -0.26
NDE1-206ENST00000572967 FAM117BQ6P1L5 589 aa13.41□□□□□ -0.26
NDE1-206ENST00000572967 NOSTRINQ8IVI9 506 aa13.41□□□□□ -0.26
NDE1-206ENST00000572967 SENP7Q9BQF6 1050 aa13.41□□□□□ -0.26
NDE1-206ENST00000572967 RNPEPQ9H4A4 650 aa13.41□□□□□ -0.26
NDE1-206ENST00000572967 TMEM260Q9NX78 707 aa13.41□□□□□ -0.26
NDE1-206ENST00000572967 RALGAPA2Q2PPJ7 1873 aa13.4□□□□□ -0.26
NDE1-206ENST00000572967 RFXAPO00287 272 aa13.4□□□□□ -0.26
NDE1-206ENST00000572967 LGR5O75473 907 aa13.4□□□□□ -0.26
NDE1-206ENST00000572967 BRD1O95696 1058 aa13.4□□□□□ -0.26
NDE1-206ENST00000572967 F13A1P00488 732 aa13.4□□□□□ -0.26
NDE1-206ENST00000572967 U2AF2P26368 475 aaKnown RBP eCLIP13.4□□□□□ -0.26
NDE1-206ENST00000572967 DDIT3P35638 169 aa13.4□□□□□ -0.26
NDE1-206ENST00000572967 GIMAP8Q8ND71 665 aaPredicted RBP13.4□□□□□ -0.26
NDE1-206ENST00000572967 PHOSPHO2Q8TCD6 241 aa13.4□□□□□ -0.26
NDE1-206ENST00000572967 ARNTL2Q8WYA1 636 aa13.4□□□□□ -0.26
NDE1-206ENST00000572967 CDHR1Q96JP9 859 aa13.4□□□□□ -0.26
NDE1-206ENST00000572967 JADE2Q9NQC1 790 aa13.4□□□□□ -0.26
NDE1-206ENST00000572967 ATG2AQ2TAZ0 1938 aa13.4□□□□□ -0.26
NDE1-206ENST00000572967 WDR81Q562E7 1941 aa13.4□□□□□ -0.26
NDE1-206ENST00000572967 EMSYQ7Z589 1322 aa13.39□□□□□ -0.27
NDE1-206ENST00000572967 KIAA1671Q9BY89 1806 aa13.39□□□□□ -0.27
NDE1-206ENST00000572967 RSPH10B2B2RC85 870 aa13.39□□□□□ -0.27
NDE1-206ENST00000572967 KIF28PB7ZC32 967 aa13.39□□□□□ -0.27
NDE1-206ENST00000572967 BMP15O95972 392 aa13.39□□□□□ -0.27
NDE1-206ENST00000572967 RSPH10BP0C881 870 aa13.39□□□□□ -0.27
NDE1-206ENST00000572967 TAP1Q03518 808 aa13.39□□□□□ -0.27
NDE1-206ENST00000572967 PPFIA1Q13136 1202 aa13.39□□□□□ -0.27
NDE1-206ENST00000572967 ORC2Q13416 577 aaPredicted RBP13.39□□□□□ -0.27
NDE1-206ENST00000572967 RILPL1Q5EBL4 403 aa13.39□□□□□ -0.27
NDE1-206ENST00000572967 ATL3Q6DD88 541 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms