RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 STXBP3O00186 592 aa18.36■□□□□ 0.53
LITAF-209ENST00000571688 HOXA7P31268 230 aaPredicted RBP18.36■□□□□ 0.53
LITAF-209ENST00000571688 TECP42680 631 aa18.36■□□□□ 0.53
LITAF-209ENST00000571688 GRB10Q13322 594 aa18.36■□□□□ 0.53
LITAF-209ENST00000571688 IFI16Q16666 785 aaKnown RBP18.36■□□□□ 0.53
LITAF-209ENST00000571688 LRRC34Q8IZ02 419 aa18.36■□□□□ 0.53
LITAF-209ENST00000571688 FAM133AQ8N9E0 248 aa18.36■□□□□ 0.53
LITAF-209ENST00000571688 AGAP1Q9UPQ3 857 aa18.36■□□□□ 0.53
LITAF-209ENST00000571688 SMNDC1O75940 238 aaKnown RBP eCLIP18.36■□□□□ 0.53
LITAF-209ENST00000571688 ARID5AQ03989 594 aa18.36■□□□□ 0.53
LITAF-209ENST00000571688 ASIC2Q16515 512 aa18.36■□□□□ 0.53
LITAF-209ENST00000571688 ZCWPW2Q504Y3 356 aa18.36■□□□□ 0.53
LITAF-209ENST00000571688 CCDC134Q9H6E4 229 aa18.36■□□□□ 0.53
LITAF-209ENST00000571688 BARHL2Q9NY43 387 aa18.36■□□□□ 0.53
LITAF-209ENST00000571688 STK17AQ9UEE5 414 aa18.36■□□□□ 0.53
LITAF-209ENST00000571688 SLIT2O94813 1529 aa18.35■□□□□ 0.53
LITAF-209ENST00000571688 CCNT1O60563 726 aaKnown RBP18.35■□□□□ 0.53
LITAF-209ENST00000571688 STARD3NLO95772 234 aa18.35■□□□□ 0.53
LITAF-209ENST00000571688 NQO1P15559 274 aaKnown RBP18.35■□□□□ 0.53
LITAF-209ENST00000571688 POU5F1Q01860 360 aaKnown RBP18.35■□□□□ 0.53
LITAF-209ENST00000571688 SLC35G1Q2M3R5 365 aa18.35■□□□□ 0.53
LITAF-209ENST00000571688 DYMQ7RTS9 669 aa18.35■□□□□ 0.53
LITAF-209ENST00000571688 ATP8B4Q8TF62 1192 aa18.35■□□□□ 0.53
LITAF-209ENST00000571688 EPB41L4BQ9H329 900 aa18.35■□□□□ 0.53
LITAF-209ENST00000571688 SAMD15Q9P1V8 674 aa18.35■□□□□ 0.53
LITAF-209ENST00000571688 KIF13BQ9NQT8 1826 aa18.35■□□□□ 0.53
LITAF-209ENST00000571688 COL1A1P02452 1464 aaPredicted RBP18.35■□□□□ 0.53
LITAF-209ENST00000571688 NUDT17P0C025 328 aa18.35■□□□□ 0.53
LITAF-209ENST00000571688 SARNPP82979 210 aaKnown RBP18.35■□□□□ 0.53
LITAF-209ENST00000571688 LETM2Q2VYF4 491 aa18.35■□□□□ 0.53
LITAF-209ENST00000571688 FAM133BQ5BKY9 247 aaKnown RBP18.35■□□□□ 0.53
LITAF-209ENST00000571688 DZIP3Q86Y13 1208 aaKnown RBP18.35■□□□□ 0.53
LITAF-209ENST00000571688 PGM2Q96G03 612 aa18.35■□□□□ 0.53
LITAF-209ENST00000571688 SPATS2LQ9NUQ6 558 aaKnown RBP18.35■□□□□ 0.53
LITAF-209ENST00000571688 ATP8A1Q9Y2Q0 1164 aa18.35■□□□□ 0.53
LITAF-209ENST00000571688 UTP11Q9Y3A2 253 aaKnown RBP18.35■□□□□ 0.53
LITAF-209ENST00000571688 FKBP3Q00688 224 aaKnown RBP18.34■□□□□ 0.53
LITAF-209ENST00000571688 KCTD19Q17RG1 926 aaPredicted RBP18.34■□□□□ 0.53
LITAF-209ENST00000571688 HEATR3Q7Z4Q2 680 aa18.34■□□□□ 0.53
LITAF-209ENST00000571688 GLIS3Q8NEA6 775 aa18.34■□□□□ 0.53
LITAF-209ENST00000571688 LARP4BQ92615 738 aaKnown RBP18.34■□□□□ 0.53
LITAF-209ENST00000571688 FMO2Q99518 471 aa18.34■□□□□ 0.53
LITAF-209ENST00000571688 CELF4Q9BZC1 486 aaKnown RBP18.34■□□□□ 0.53
LITAF-209ENST00000571688 GANQ9H2C0 597 aa18.34■□□□□ 0.53
LITAF-209ENST00000571688 DPH5Q9H2P9 285 aa18.34■□□□□ 0.53
LITAF-209ENST00000571688 SLC5A4Q9NY91 659 aa18.34■□□□□ 0.53
LITAF-209ENST00000571688 ZNF804BA4D1E1 1349 aa18.34■□□□□ 0.53
LITAF-209ENST00000571688 KIAA1551Q9HCM1 1747 aa18.34■□□□□ 0.53
LITAF-209ENST00000571688 NCALDP61601 193 aa18.34■□□□□ 0.53
LITAF-209ENST00000571688 PSMD2Q13200 908 aa18.34■□□□□ 0.53
LITAF-209ENST00000571688 MIS18BP1Q6P0N0 1132 aa18.34■□□□□ 0.53
LITAF-209ENST00000571688 TPCN2Q8NHX9 752 aa18.34■□□□□ 0.53
LITAF-209ENST00000571688 ZNF384Q8TF68 577 aa18.34■□□□□ 0.53
LITAF-209ENST00000571688 CNKSR1Q969H4 720 aa18.34■□□□□ 0.53
LITAF-209ENST00000571688 PNMA5Q96PV4 448 aa18.34■□□□□ 0.53
LITAF-209ENST00000571688 ELAC2Q9BQ52 826 aaKnown RBP18.34■□□□□ 0.53
LITAF-209ENST00000571688 SELENOSQ9BQE4 189 aa18.34■□□□□ 0.53
LITAF-209ENST00000571688 KIF9Q9HAQ2 790 aa18.34■□□□□ 0.53
LITAF-209ENST00000571688 ABCF3Q9NUQ8 709 aa18.34■□□□□ 0.53
LITAF-209ENST00000571688 STXBP5LQ9Y2K9 1186 aa18.34■□□□□ 0.53
LITAF-209ENST00000571688 TSPY2A6NKD2 308 aa18.33■□□□□ 0.53
LITAF-209ENST00000571688 LIN7AO14910 233 aaPredicted RBP18.33■□□□□ 0.53
LITAF-209ENST00000571688 SHBGP04278 402 aa18.33■□□□□ 0.53
LITAF-209ENST00000571688 GRM4Q14833 912 aa18.33■□□□□ 0.53
LITAF-209ENST00000571688 LRRC41Q15345 812 aa18.33■□□□□ 0.53
LITAF-209ENST00000571688 ENOX2Q16206 610 aaKnown RBP18.33■□□□□ 0.53
LITAF-209ENST00000571688 CAPRIN2Q6IMN6 1127 aaKnown RBP18.33■□□□□ 0.53
LITAF-209ENST00000571688 SLFN11Q7Z7L1 901 aa18.33■□□□□ 0.53
LITAF-209ENST00000571688 MAD2L2Q9UI95 211 aa18.33■□□□□ 0.53
LITAF-209ENST00000571688 EME2A4GXA9 379 aaPredicted RBP18.33■□□□□ 0.52
LITAF-209ENST00000571688 RARAP10276 462 aa18.33■□□□□ 0.52
LITAF-209ENST00000571688 CCND1P24385 295 aa18.33■□□□□ 0.52
LITAF-209ENST00000571688 ALDH5A1P51649 535 aaPredicted RBP18.33■□□□□ 0.52
LITAF-209ENST00000571688 KCNJ2P63252 427 aa18.33■□□□□ 0.52
LITAF-209ENST00000571688 PTPROQ16827 1216 aa18.33■□□□□ 0.52
LITAF-209ENST00000571688 KRT25Q7Z3Z0 450 aa18.33■□□□□ 0.52
LITAF-209ENST00000571688 TRIM59Q8IWR1 403 aa18.33■□□□□ 0.52
LITAF-209ENST00000571688 HOMER3Q9NSC5 361 aa18.33■□□□□ 0.52
LITAF-209ENST00000571688 CYTH3O43739 400 aa18.32■□□□□ 0.52
LITAF-209ENST00000571688 DIAPH2O60879 1101 aa18.32■□□□□ 0.52
LITAF-209ENST00000571688 PTK2Q05397 1052 aa18.32■□□□□ 0.52
LITAF-209ENST00000571688 NONOQ15233 471 aaKnown RBP eCLIP18.32■□□□□ 0.52
LITAF-209ENST00000571688 PNMA1Q8ND90 353 aa18.32■□□□□ 0.52
LITAF-209ENST00000571688 SAAL1Q96ER3 474 aa18.32■□□□□ 0.52
LITAF-209ENST00000571688 MTFR1LQ9H019 292 aa18.32■□□□□ 0.52
LITAF-209ENST00000571688 TMOD3Q9NYL9 352 aa18.32■□□□□ 0.52
LITAF-209ENST00000571688 SUCLA2Q9P2R7 463 aaPredicted RBP18.32■□□□□ 0.52
LITAF-209ENST00000571688 CORO1CQ9ULV4 474 aaPredicted RBP18.32■□□□□ 0.52
LITAF-209ENST00000571688 GNAQP50148 359 aa18.32■□□□□ 0.52
LITAF-209ENST00000571688 MARSP56192 900 aaKnown RBP18.32■□□□□ 0.52
LITAF-209ENST00000571688 BIRC2Q13490 618 aa18.32■□□□□ 0.52
LITAF-209ENST00000571688 ZNF571Q7Z3V5 609 aaPredicted RBP18.32■□□□□ 0.52
LITAF-209ENST00000571688 MYOCDQ8IZQ8 938 aa18.32■□□□□ 0.52
LITAF-209ENST00000571688 DDX17Q92841 729 aaKnown RBP18.32■□□□□ 0.52
LITAF-209ENST00000571688 SH3GL3Q99963 347 aa18.32■□□□□ 0.52
LITAF-209ENST00000571688 ASAP1Q9ULH1 1129 aa18.32■□□□□ 0.52
LITAF-209ENST00000571688 ATP8B3O60423 1300 aa18.31■□□□□ 0.52
LITAF-209ENST00000571688 TRAF5O00463 557 aa18.31■□□□□ 0.52
LITAF-209ENST00000571688 UBOX5O94941 541 aa18.31■□□□□ 0.52
LITAF-209ENST00000571688 SF3A3Q12874 501 aaKnown RBP eCLIP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms