RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 TAF2Q6P1X5 1199 aa9.86□□□□□ -0.83
CTDNEP1-203ENST00000570385 SYNE3Q6ZMZ3 975 aa9.86□□□□□ -0.83
CTDNEP1-203ENST00000570385 RSPH3Q86UC2 560 aa9.86□□□□□ -0.83
CTDNEP1-203ENST00000570385 FIBCD1Q8N539 461 aa9.86□□□□□ -0.83
CTDNEP1-203ENST00000570385 APBB2Q92870 758 aa9.86□□□□□ -0.83
CTDNEP1-203ENST00000570385 CDHR1Q96JP9 859 aa9.86□□□□□ -0.83
CTDNEP1-203ENST00000570385 PCYT2Q99447 389 aa9.86□□□□□ -0.83
CTDNEP1-203ENST00000570385 SMARCAD1Q9H4L7 1026 aa9.86□□□□□ -0.83
CTDNEP1-203ENST00000570385 EHMT1Q9H9B1 1298 aa9.86□□□□□ -0.83
CTDNEP1-203ENST00000570385 AGO3Q9H9G7 860 aaKnown RBP9.86□□□□□ -0.83
CTDNEP1-203ENST00000570385 JPH1Q9HDC5 661 aaPredicted RBP9.86□□□□□ -0.83
CTDNEP1-203ENST00000570385 KCNH7Q9NS40 1196 aa9.86□□□□□ -0.83
CTDNEP1-203ENST00000570385 TMEM260Q9NX78 707 aa9.86□□□□□ -0.83
CTDNEP1-203ENST00000570385 BRPF3Q9ULD4 1205 aa9.86□□□□□ -0.83
CTDNEP1-203ENST00000570385 NAP1L2Q9ULW6 460 aaPredicted RBP9.86□□□□□ -0.83
CTDNEP1-203ENST00000570385 TRPC6Q9Y210 931 aa9.86□□□□□ -0.83
CTDNEP1-203ENST00000570385 V9GY48 417 aaPredicted RBP9.86□□□□□ -0.83
CTDNEP1-203ENST00000570385 DDX39AO00148 427 aaKnown RBP9.85□□□□□ -0.83
CTDNEP1-203ENST00000570385 GRM6O15303 877 aa9.85□□□□□ -0.83
CTDNEP1-203ENST00000570385 CD52P31358 61 aa9.85□□□□□ -0.83
CTDNEP1-203ENST00000570385 NAPAP54920 295 aa9.85□□□□□ -0.83
CTDNEP1-203ENST00000570385 MRPS6P82932 125 aaKnown RBP9.85□□□□□ -0.83
CTDNEP1-203ENST00000570385 CLUL1Q15846 466 aa9.85□□□□□ -0.83
CTDNEP1-203ENST00000570385 RTN1Q16799 776 aa9.85□□□□□ -0.83
CTDNEP1-203ENST00000570385 TIGD5Q53EQ6 642 aa9.85□□□□□ -0.83
CTDNEP1-203ENST00000570385 TMEM31Q5JXX7 168 aa9.85□□□□□ -0.83
CTDNEP1-203ENST00000570385 FBXO47Q5MNV8 452 aa9.85□□□□□ -0.83
CTDNEP1-203ENST00000570385 FAM178BQ8IXR5 827 aa9.85□□□□□ -0.83
CTDNEP1-203ENST00000570385 GJD3Q8N144 294 aa9.85□□□□□ -0.83
CTDNEP1-203ENST00000570385 SAMD11Q96NU1 681 aa9.85□□□□□ -0.83
CTDNEP1-203ENST00000570385 NEK1Q96PY6 1258 aa9.85□□□□□ -0.83
CTDNEP1-203ENST00000570385 MXRA8Q9BRK3 442 aa9.85□□□□□ -0.83
CTDNEP1-203ENST00000570385 MTA3Q9BTC8 594 aa9.85□□□□□ -0.83
CTDNEP1-203ENST00000570385 CLDND1Q9NY35 253 aa9.85□□□□□ -0.83
CTDNEP1-203ENST00000570385 SLC9A2Q9UBY0 812 aa9.85□□□□□ -0.83
CTDNEP1-203ENST00000570385 CNTNAP5Q8WYK1 1306 aa9.84□□□□□ -0.83
CTDNEP1-203ENST00000570385 TTC3P53804 2025 aa9.84□□□□□ -0.83
CTDNEP1-203ENST00000570385 MBLAC1A4D2B0 266 aaPredicted RBP9.84□□□□□ -0.83
CTDNEP1-203ENST00000570385 GRXCR2A6NFK2 248 aa9.84□□□□□ -0.83
CTDNEP1-203ENST00000570385 GATMP50440 423 aa9.84□□□□□ -0.83
CTDNEP1-203ENST00000570385 ACTR2P61160 394 aa9.84□□□□□ -0.83
CTDNEP1-203ENST00000570385 BTG3Q14201 252 aaPredicted RBP9.84□□□□□ -0.83
CTDNEP1-203ENST00000570385 PLCB4Q15147 1175 aa9.84□□□□□ -0.83
CTDNEP1-203ENST00000570385 ADCK5Q3MIX3 580 aa9.84□□□□□ -0.83
CTDNEP1-203ENST00000570385 PAN2Q504Q3 1202 aaKnown RBP9.84□□□□□ -0.83
CTDNEP1-203ENST00000570385 APOA5Q6Q788 366 aa9.84□□□□□ -0.83
CTDNEP1-203ENST00000570385 TRMT1LQ7Z2T5 733 aaKnown RBP9.84□□□□□ -0.83
CTDNEP1-203ENST00000570385 RPAINQ86UA6 219 aa9.84□□□□□ -0.83
CTDNEP1-203ENST00000570385 RTN4RL1Q86UN2 441 aaPredicted RBP9.84□□□□□ -0.83
CTDNEP1-203ENST00000570385 SGMS1Q86VZ5 419 aa9.84□□□□□ -0.83
CTDNEP1-203ENST00000570385 RASEFQ8IZ41 740 aa9.84□□□□□ -0.83
CTDNEP1-203ENST00000570385 LINC01599Q8WXQ3 324 aa9.84□□□□□ -0.83
CTDNEP1-203ENST00000570385 FAM122AQ96E09 287 aa9.84□□□□□ -0.83
CTDNEP1-203ENST00000570385 SDF4Q9BRK5 362 aa9.84□□□□□ -0.83
CTDNEP1-203ENST00000570385 ANO3Q9BYT9 981 aa9.84□□□□□ -0.83
CTDNEP1-203ENST00000570385 NSUN3Q9H649 340 aaKnown RBP9.84□□□□□ -0.83
CTDNEP1-203ENST00000570385 IGFLR1Q9H665 355 aa9.84□□□□□ -0.83
CTDNEP1-203ENST00000570385 AZI2Q9H6S1 392 aa9.84□□□□□ -0.83
CTDNEP1-203ENST00000570385 ALG13Q9NP73 1137 aaKnown RBP9.84□□□□□ -0.83
CTDNEP1-203ENST00000570385 C11orf16Q9NQ32 467 aa9.84□□□□□ -0.83
CTDNEP1-203ENST00000570385 GINS2Q9Y248 185 aa9.84□□□□□ -0.83
CTDNEP1-203ENST00000570385 NLRC5Q86WI3 1866 aa9.84□□□□□ -0.83
CTDNEP1-203ENST00000570385 MUC6Q6W4X9 2439 aa9.84□□□□□ -0.83
CTDNEP1-203ENST00000570385 ADGRA3Q8IWK6 1321 aa9.83□□□□□ -0.84
CTDNEP1-203ENST00000570385 SMCO2A6NFE2 343 aa9.83□□□□□ -0.84
CTDNEP1-203ENST00000570385 RRN3P2A6NIE6 340 aa9.83□□□□□ -0.84
CTDNEP1-203ENST00000570385 GOLGA8AA7E2F4 631 aa9.83□□□□□ -0.84
CTDNEP1-203ENST00000570385 GOLGA8BA8MQT2 603 aa9.83□□□□□ -0.84
CTDNEP1-203ENST00000570385 PI4K2BG5E9Z4 385 aa9.83□□□□□ -0.84
CTDNEP1-203ENST00000570385 STXBP3O00186 592 aa9.83□□□□□ -0.84
CTDNEP1-203ENST00000570385 ADAMTS3O15072 1205 aa9.83□□□□□ -0.84
CTDNEP1-203ENST00000570385 ZBTB43O43298 467 aa9.83□□□□□ -0.84
CTDNEP1-203ENST00000570385 PPFIA3O75145 1194 aa9.83□□□□□ -0.84
CTDNEP1-203ENST00000570385 LINC00271P0C7V0 271 aa9.83□□□□□ -0.84
CTDNEP1-203ENST00000570385 CPA1P15085 419 aa9.83□□□□□ -0.84
CTDNEP1-203ENST00000570385 CDC27P30260 824 aa9.83□□□□□ -0.84
CTDNEP1-203ENST00000570385 GTF2F1P35269 517 aaKnown RBP eCLIP9.83□□□□□ -0.84
CTDNEP1-203ENST00000570385 ZNF76P36508 570 aa9.83□□□□□ -0.84
CTDNEP1-203ENST00000570385 BMPR1AP36894 532 aa9.83□□□□□ -0.84
CTDNEP1-203ENST00000570385 STAT5BP51692 787 aa9.83□□□□□ -0.84
CTDNEP1-203ENST00000570385 ADCY7P51828 1080 aa9.83□□□□□ -0.84
CTDNEP1-203ENST00000570385 DLX2Q07687 328 aaPredicted RBP9.83□□□□□ -0.84
CTDNEP1-203ENST00000570385 ITGB3BPQ13352 177 aaPredicted RBP9.83□□□□□ -0.84
CTDNEP1-203ENST00000570385 TMEM266Q2M3C6 531 aa9.83□□□□□ -0.84
CTDNEP1-203ENST00000570385 RNF20Q5VTR2 975 aa9.83□□□□□ -0.84
CTDNEP1-203ENST00000570385 IER5Q5VY09 327 aa9.83□□□□□ -0.84
CTDNEP1-203ENST00000570385 JAKMIP3Q5VZ66 844 aa9.83□□□□□ -0.84
CTDNEP1-203ENST00000570385 TSHZ1Q6ZSZ6 1077 aa9.83□□□□□ -0.84
CTDNEP1-203ENST00000570385 NEK9Q8TD19 979 aa9.83□□□□□ -0.84
CTDNEP1-203ENST00000570385 PABPC5Q96DU9 382 aaKnown RBP9.83□□□□□ -0.84
CTDNEP1-203ENST00000570385 PPP1R16BQ96T49 567 aa9.83□□□□□ -0.84
CTDNEP1-203ENST00000570385 AGO4Q9HCK5 861 aaKnown RBP9.83□□□□□ -0.84
CTDNEP1-203ENST00000570385 RIC8AQ9NPQ8 531 aa9.83□□□□□ -0.84
CTDNEP1-203ENST00000570385 LOXHD1Q8IVV2 1947 aa9.83□□□□□ -0.84
CTDNEP1-203ENST00000570385 KLF18A0A0U1RQI7 1052 aa9.82□□□□□ -0.84
CTDNEP1-203ENST00000570385 POTEB3A0JP26 581 aa9.82□□□□□ -0.84
CTDNEP1-203ENST00000570385 M0QZ92 97 aa9.82□□□□□ -0.84
CTDNEP1-203ENST00000570385 BACH1O14867 736 aa9.82□□□□□ -0.84
CTDNEP1-203ENST00000570385 MAFGO15525 162 aa9.82□□□□□ -0.84
CTDNEP1-203ENST00000570385 LINC01565O15544 149 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms