RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 ELOA3DA6NLF2 546 aaPredicted RBP3.93□□□□□ -1.78
CNOT1-221ENST00000569924 GPR25O00155 361 aa3.93□□□□□ -1.78
CNOT1-221ENST00000569924 TRAF5O00463 557 aa3.93□□□□□ -1.78
CNOT1-221ENST00000569924 APAF1O14727 1248 aa3.93□□□□□ -1.78
CNOT1-221ENST00000569924 AXIN1O15169 862 aa3.93□□□□□ -1.78
CNOT1-221ENST00000569924 TMPRSS2O15393 492 aa3.93□□□□□ -1.78
CNOT1-221ENST00000569924 TCEA3O75764 348 aa3.93□□□□□ -1.78
CNOT1-221ENST00000569924 DLGAP3O95886 979 aa3.93□□□□□ -1.78
CNOT1-221ENST00000569924 MT-CO1P00395 513 aa3.93□□□□□ -1.78
CNOT1-221ENST00000569924 CFBP00751 764 aa3.93□□□□□ -1.78
CNOT1-221ENST00000569924 RBP3P10745 1247 aa3.93□□□□□ -1.78
CNOT1-221ENST00000569924 GYS1P13807 737 aa3.93□□□□□ -1.78
CNOT1-221ENST00000569924 DPEP1P16444 411 aa3.93□□□□□ -1.78
CNOT1-221ENST00000569924 ALAS2P22557 587 aa3.93□□□□□ -1.78
CNOT1-221ENST00000569924 RFC4P35249 363 aa3.93□□□□□ -1.78
CNOT1-221ENST00000569924 GRIK1P39086 918 aa3.93□□□□□ -1.78
CNOT1-221ENST00000569924 SESN3P58005 492 aa3.93□□□□□ -1.78
CNOT1-221ENST00000569924 NLRP12P59046 1061 aa3.93□□□□□ -1.78
CNOT1-221ENST00000569924 RNF4P78317 190 aa3.93□□□□□ -1.78
CNOT1-221ENST00000569924 FOXD4Q12950 439 aaPredicted RBP3.93□□□□□ -1.78
CNOT1-221ENST00000569924 EIF4A2Q14240 407 aaKnown RBP3.93□□□□□ -1.78
CNOT1-221ENST00000569924 ELOA3BQ3SY89 546 aa3.93□□□□□ -1.78
CNOT1-221ENST00000569924 AMOTQ4VCS5 1084 aa3.93□□□□□ -1.78
CNOT1-221ENST00000569924 PLEKHO1Q53GL0 409 aaPredicted RBP3.93□□□□□ -1.78
CNOT1-221ENST00000569924 EXOSC6Q5RKV6 272 aaKnown RBP3.93□□□□□ -1.78
CNOT1-221ENST00000569924 NOL9Q5SY16 702 aaKnown RBP3.93□□□□□ -1.78
CNOT1-221ENST00000569924 GPR158Q5T848 1215 aa3.93□□□□□ -1.78
CNOT1-221ENST00000569924 PRAMEF13Q5VWM6 474 aa3.93□□□□□ -1.78
CNOT1-221ENST00000569924 KCNT2Q6UVM3 1135 aa3.93□□□□□ -1.78
CNOT1-221ENST00000569924 RSPO2Q6UXX9 243 aaPredicted RBP3.93□□□□□ -1.78
CNOT1-221ENST00000569924 ARHGAP27Q6ZUM4 889 aa3.93□□□□□ -1.78
CNOT1-221ENST00000569924 TOGARAM2Q6ZUX3 1019 aa3.93□□□□□ -1.78
CNOT1-221ENST00000569924 PNMA8AQ86V59 439 aaPredicted RBP3.93□□□□□ -1.78
CNOT1-221ENST00000569924 C11orf74Q86VG3 221 aa3.93□□□□□ -1.78
CNOT1-221ENST00000569924 DNAJC5GQ8N7S2 189 aa3.93□□□□□ -1.78
CNOT1-221ENST00000569924 IGSF22Q8N9C0 903 aa3.93□□□□□ -1.78
CNOT1-221ENST00000569924 KREMEN2Q8NCW0 462 aa3.93□□□□□ -1.78
CNOT1-221ENST00000569924 ELOA3Q8NG57 546 aa3.93□□□□□ -1.78
CNOT1-221ENST00000569924 SYTL5Q8TDW5 730 aaPredicted RBP3.93□□□□□ -1.78
CNOT1-221ENST00000569924 PPP1R13LQ8WUF5 828 aa3.93□□□□□ -1.78
CNOT1-221ENST00000569924 HSPBAP1Q96EW2 488 aa3.93□□□□□ -1.78
CNOT1-221ENST00000569924 GPR101Q96P66 508 aaPredicted RBP3.93□□□□□ -1.78
CNOT1-221ENST00000569924 ZFYVE21Q9BQ24 234 aa3.93□□□□□ -1.78
CNOT1-221ENST00000569924 VTA1Q9NP79 307 aa3.93□□□□□ -1.78
CNOT1-221ENST00000569924 CABP5Q9NP86 173 aa3.93□□□□□ -1.78
CNOT1-221ENST00000569924 ANLNQ9NQW6 1124 aa3.93□□□□□ -1.78
CNOT1-221ENST00000569924 DDX21Q9NR30 783 aaKnown RBP eCLIP3.93□□□□□ -1.78
CNOT1-221ENST00000569924 B4GALT6Q9UBX8 382 aa3.93□□□□□ -1.78
CNOT1-221ENST00000569924 CEP131Q9UPN4 1083 aa3.93□□□□□ -1.78
CNOT1-221ENST00000569924 LAS1LQ9Y4W2 734 aaKnown RBP3.93□□□□□ -1.78
CNOT1-221ENST00000569924 PCDHA8Q9Y5H6 950 aa3.93□□□□□ -1.78
CNOT1-221ENST00000569924 FRMPD2Q68DX3 1309 aaPredicted RBP3.93□□□□□ -1.78
CNOT1-221ENST00000569924 MYH14Q7Z406 1995 aaKnown RBP3.93□□□□□ -1.78
CNOT1-221ENST00000569924 ARVCFO00192 962 aa3.92□□□□□ -1.78
CNOT1-221ENST00000569924 ASGR2P07307 311 aa3.92□□□□□ -1.78
CNOT1-221ENST00000569924 ATP2A2P16615 1042 aaKnown RBP3.92□□□□□ -1.78
CNOT1-221ENST00000569924 KCNA3P22001 575 aa3.92□□□□□ -1.78
CNOT1-221ENST00000569924 SERPINB3P29508 390 aa3.92□□□□□ -1.78
CNOT1-221ENST00000569924 ECI1P42126 302 aa3.92□□□□□ -1.78
CNOT1-221ENST00000569924 GJA9P57773 515 aa3.92□□□□□ -1.78
CNOT1-221ENST00000569924 CYP4F3Q08477 520 aa3.92□□□□□ -1.78
CNOT1-221ENST00000569924 FSTL1Q12841 308 aa3.92□□□□□ -1.78
CNOT1-221ENST00000569924 GALEQ14376 348 aa3.92□□□□□ -1.78
CNOT1-221ENST00000569924 PPP2R5DQ14738 602 aa3.92□□□□□ -1.78
CNOT1-221ENST00000569924 ODF1Q14990 250 aa3.92□□□□□ -1.78
CNOT1-221ENST00000569924 PRSS53Q2L4Q9 553 aa3.92□□□□□ -1.78
CNOT1-221ENST00000569924 DENND5AQ6IQ26 1287 aa3.92□□□□□ -1.78
CNOT1-221ENST00000569924 ZNF530Q6P9A1 599 aaPredicted RBP3.92□□□□□ -1.78
CNOT1-221ENST00000569924 PGM2L1Q6PCE3 622 aa3.92□□□□□ -1.78
CNOT1-221ENST00000569924 C20orf204Q6ZNR8 217 aa3.92□□□□□ -1.78
CNOT1-221ENST00000569924 MTDHQ86UE4 582 aaKnown RBP3.92□□□□□ -1.78
CNOT1-221ENST00000569924 SMAP1Q8IYB5 467 aaPredicted RBP3.92□□□□□ -1.78
CNOT1-221ENST00000569924 CMTR2Q8IYT2 770 aaKnown RBP3.92□□□□□ -1.78
CNOT1-221ENST00000569924 CRIPAKQ8N1N5 446 aa3.92□□□□□ -1.78
CNOT1-221ENST00000569924 PAF1Q8N7H5 531 aa3.92□□□□□ -1.78
CNOT1-221ENST00000569924 CLRN3Q8NCR9 226 aa3.92□□□□□ -1.78
CNOT1-221ENST00000569924 CHTF18Q8WVB6 975 aa3.92□□□□□ -1.78
CNOT1-221ENST00000569924 GJA10Q969M2 543 aa3.92□□□□□ -1.78
CNOT1-221ENST00000569924 RUNDC1Q96C34 613 aa3.92□□□□□ -1.78
CNOT1-221ENST00000569924 FBXL18Q96ME1 805 aa3.92□□□□□ -1.78
CNOT1-221ENST00000569924 FANCD2OSQ96PS1 177 aa3.92□□□□□ -1.78
CNOT1-221ENST00000569924 FOXQ1Q9C009 403 aa3.92□□□□□ -1.78
CNOT1-221ENST00000569924 ATXN3LQ9H3M9 355 aa3.92□□□□□ -1.78
CNOT1-221ENST00000569924 NOL6Q9H6R4 1146 aaKnown RBP3.92□□□□□ -1.78
CNOT1-221ENST00000569924 JPH1Q9HDC5 661 aaPredicted RBP3.92□□□□□ -1.78
CNOT1-221ENST00000569924 NMRK2Q9NPI5 230 aa3.92□□□□□ -1.78
CNOT1-221ENST00000569924 C1orf112Q9NSG2 853 aa3.92□□□□□ -1.78
CNOT1-221ENST00000569924 SPTLC3Q9NUV7 552 aa3.92□□□□□ -1.78
CNOT1-221ENST00000569924 THG1LQ9NWX6 298 aaKnown RBP3.92□□□□□ -1.78
CNOT1-221ENST00000569924 PRR13Q9NZ81 148 aa3.92□□□□□ -1.78
CNOT1-221ENST00000569924 PIM2Q9P1W9 311 aa3.92□□□□□ -1.78
CNOT1-221ENST00000569924 SWAP70Q9UH65 585 aa3.92□□□□□ -1.78
CNOT1-221ENST00000569924 FBXL21Q9UKT6 434 aa3.92□□□□□ -1.78
CNOT1-221ENST00000569924 PHTF1Q9UMS5 762 aa3.92□□□□□ -1.78
CNOT1-221ENST00000569924 PDZRN3Q9UPQ7 1066 aa3.92□□□□□ -1.78
CNOT1-221ENST00000569924 STARD13Q9Y3M8 1113 aa3.92□□□□□ -1.78
CNOT1-221ENST00000569924 PCDHB12Q9Y5F1 795 aa3.92□□□□□ -1.78
CNOT1-221ENST00000569924 PPP2R3BQ9Y5P8 575 aa3.92□□□□□ -1.78
CNOT1-221ENST00000569924 MRFAP1Q9Y605 127 aa3.92□□□□□ -1.78
CNOT1-221ENST00000569924 KDM6AO15550 1401 aaPredicted RBP3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms