RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 OAZ3Q9UMX2 235 aa7.46□□□□□ -1.22
CHD9-220ENST00000569794 ACOT7O00154 380 aa7.45□□□□□ -1.22
CHD9-220ENST00000569794 CUTAO60888 179 aa7.45□□□□□ -1.22
CHD9-220ENST00000569794 ACO1P21399 889 aaKnown RBP7.45□□□□□ -1.22
CHD9-220ENST00000569794 PTH1RQ03431 593 aa7.45□□□□□ -1.22
CHD9-220ENST00000569794 TOP3AQ13472 1001 aaPredicted RBP7.45□□□□□ -1.22
CHD9-220ENST00000569794 RNF151Q2KHN1 245 aa7.45□□□□□ -1.22
CHD9-220ENST00000569794 KCNT2Q6UVM3 1135 aa7.45□□□□□ -1.22
CHD9-220ENST00000569794 KCTD1Q719H9 257 aa7.45□□□□□ -1.22
CHD9-220ENST00000569794 VPS37DQ86XT2 251 aa7.45□□□□□ -1.22
CHD9-220ENST00000569794 AMER2Q8N7J2 671 aa7.45□□□□□ -1.22
CHD9-220ENST00000569794 DCAF4Q8WV16 495 aa7.45□□□□□ -1.22
CHD9-220ENST00000569794 SLC30A1Q9Y6M5 507 aa7.45□□□□□ -1.22
CHD9-220ENST00000569794 WDR33Q9C0J8 1336 aaKnown RBP7.45□□□□□ -1.22
CHD9-220ENST00000569794 CR2P20023 1033 aa7.44□□□□□ -1.22
CHD9-220ENST00000569794 DGCR2P98153 550 aa7.44□□□□□ -1.22
CHD9-220ENST00000569794 PURAQ00577 322 aaKnown RBP7.44□□□□□ -1.22
CHD9-220ENST00000569794 POLNQ7Z5Q5 900 aa7.44□□□□□ -1.22
CHD9-220ENST00000569794 ZFYVE21Q9BQ24 234 aa7.44□□□□□ -1.22
CHD9-220ENST00000569794 GPR85P60893 370 aa7.43□□□□□ -1.22
CHD9-220ENST00000569794 LSM12Q3MHD2 195 aaKnown RBP7.43□□□□□ -1.22
CHD9-220ENST00000569794 DPYSL5Q9BPU6 564 aa7.43□□□□□ -1.22
CHD9-220ENST00000569794 SLC39A2Q9NP94 309 aa7.43□□□□□ -1.22
CHD9-220ENST00000569794 ESYT3A0FGR9 886 aa7.42□□□□□ -1.22
CHD9-220ENST00000569794 MCM7P33993 719 aa7.42□□□□□ -1.22
CHD9-220ENST00000569794 INHBEP58166 350 aa7.42□□□□□ -1.22
CHD9-220ENST00000569794 DPTQ07507 201 aa7.42□□□□□ -1.22
CHD9-220ENST00000569794 DBPQ10586 325 aaPredicted RBP7.42□□□□□ -1.22
CHD9-220ENST00000569794 DUSP8Q13202 625 aa7.42□□□□□ -1.22
CHD9-220ENST00000569794 HSP90AA2PQ14568 343 aaPredicted RBP7.42□□□□□ -1.22
CHD9-220ENST00000569794 NTRK3Q16288 839 aa7.42□□□□□ -1.22
CHD9-220ENST00000569794 SMN1Q16637 294 aaKnown RBP7.42□□□□□ -1.22
CHD9-220ENST00000569794 MAMDC4Q6UXC1 1216 aa7.42□□□□□ -1.22
CHD9-220ENST00000569794 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.42□□□□□ -1.22
CHD9-220ENST00000569794 TRIM8Q9BZR9 551 aa7.42□□□□□ -1.22
CHD9-220ENST00000569794 MATN2O00339 956 aa7.41□□□□□ -1.22
CHD9-220ENST00000569794 SOD2P04179 222 aa7.41□□□□□ -1.22
CHD9-220ENST00000569794 NOLC1Q14978 699 aaKnown RBP eCLIP7.41□□□□□ -1.22
CHD9-220ENST00000569794 ZMAT1Q5H9K5 638 aa7.41□□□□□ -1.22
CHD9-220ENST00000569794 STYK1Q6J9G0 422 aa7.41□□□□□ -1.22
CHD9-220ENST00000569794 DPP8Q6V1X1 898 aaPredicted RBP7.41□□□□□ -1.22
CHD9-220ENST00000569794 C1orf210Q8IVY1 113 aa7.41□□□□□ -1.22
CHD9-220ENST00000569794 IFNL3Q8IZI9 196 aa7.41□□□□□ -1.22
CHD9-220ENST00000569794 FAM89AQ96GI7 184 aa7.41□□□□□ -1.22
CHD9-220ENST00000569794 SGSM3Q96HU1 749 aa7.41□□□□□ -1.22
CHD9-220ENST00000569794 OR14A2Q96R54 314 aa7.41□□□□□ -1.22
CHD9-220ENST00000569794 AARSD1Q9BTE6 412 aaKnown RBP7.41□□□□□ -1.22
CHD9-220ENST00000569794 CD244Q9BZW8 370 aa7.41□□□□□ -1.22
CHD9-220ENST00000569794 IKZF4Q9H2S9 585 aa7.41□□□□□ -1.22
CHD9-220ENST00000569794 ZNF408Q9H9D4 720 aa7.41□□□□□ -1.22
CHD9-220ENST00000569794 PRODHO43272 600 aa7.4□□□□□ -1.22
CHD9-220ENST00000569794 CDC14BO60729 498 aa7.4□□□□□ -1.22
CHD9-220ENST00000569794 FGFR1P11362 822 aa7.4□□□□□ -1.22
CHD9-220ENST00000569794 ETV4P43268 484 aa7.4□□□□□ -1.22
CHD9-220ENST00000569794 RRADP55042 308 aa7.4□□□□□ -1.22
CHD9-220ENST00000569794 IL17DQ8TAD2 202 aa7.4□□□□□ -1.22
CHD9-220ENST00000569794 OSBP2Q969R2 916 aa7.4□□□□□ -1.22
CHD9-220ENST00000569794 CEP89Q96ST8 783 aa7.4□□□□□ -1.22
CHD9-220ENST00000569794 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.4□□□□□ -1.22
CHD9-220ENST00000569794 ARHGEF4Q9NR80 690 aa7.4□□□□□ -1.22
CHD9-220ENST00000569794 NR2E1Q9Y466 385 aa7.4□□□□□ -1.22
CHD9-220ENST00000569794 FAM47E-STBD1D6RA91 191 aa7.39□□□□□ -1.23
CHD9-220ENST00000569794 C1SP09871 688 aa7.39□□□□□ -1.23
CHD9-220ENST00000569794 NFYCQ13952 458 aa7.39□□□□□ -1.23
CHD9-220ENST00000569794 SH3RF2Q8TEC5 729 aa7.39□□□□□ -1.23
CHD9-220ENST00000569794 CACTINQ8WUQ7 758 aaKnown RBP7.39□□□□□ -1.23
CHD9-220ENST00000569794 SCYL1Q96KG9 808 aa7.39□□□□□ -1.23
CHD9-220ENST00000569794 PLA2G12BQ9BX93 195 aa7.39□□□□□ -1.23
CHD9-220ENST00000569794 IPPKQ9H8X2 491 aa7.39□□□□□ -1.23
CHD9-220ENST00000569794 TCRBV5S4A2TA0A5A2 114 aa7.38□□□□□ -1.23
CHD9-220ENST00000569794 UNCXA6NJT0 531 aa7.38□□□□□ -1.23
CHD9-220ENST00000569794 PABPC1P11940 636 aaKnown RBP7.38□□□□□ -1.23
CHD9-220ENST00000569794 ACRV1P26436 265 aa7.38□□□□□ -1.23
CHD9-220ENST00000569794 CELF2-AS1Q8N7Q2 184 aa7.38□□□□□ -1.23
CHD9-220ENST00000569794 PLEKHG4BQ96PX9 1271 aa7.38□□□□□ -1.23
CHD9-220ENST00000569794 ST7Q9NRC1 585 aa7.38□□□□□ -1.23
CHD9-220ENST00000569794 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.37□□□□□ -1.23
CHD9-220ENST00000569794 BLACEA4D250 179 aa7.37□□□□□ -1.23
CHD9-220ENST00000569794 FGRP09769 529 aa7.37□□□□□ -1.23
CHD9-220ENST00000569794 TBR1Q16650 682 aa7.37□□□□□ -1.23
CHD9-220ENST00000569794 BTBD8Q5XKL5 378 aa7.37□□□□□ -1.23
CHD9-220ENST00000569794 NSMFQ6X4W1 530 aa7.37□□□□□ -1.23
CHD9-220ENST00000569794 ALG1Q9BT22 464 aa7.37□□□□□ -1.23
CHD9-220ENST00000569794 ZDHHC5Q9C0B5 715 aa7.37□□□□□ -1.23
CHD9-220ENST00000569794 LOC105371045A0A1W2PR82 267 aa7.36□□□□□ -1.23
CHD9-220ENST00000569794 IQCA1LA6NCM1 817 aa7.36□□□□□ -1.23
CHD9-220ENST00000569794 FAM90A27PA6NNH2 459 aa7.36□□□□□ -1.23
CHD9-220ENST00000569794 ARHGAP6O43182 974 aa7.36□□□□□ -1.23
CHD9-220ENST00000569794 PTPN1P18031 435 aaKnown RBP7.36□□□□□ -1.23
CHD9-220ENST00000569794 RPS19P39019 145 aaKnown RBP7.36□□□□□ -1.23
CHD9-220ENST00000569794 DDR2Q16832 855 aa7.36□□□□□ -1.23
CHD9-220ENST00000569794 WDR72Q3MJ13 1102 aa7.36□□□□□ -1.23
CHD9-220ENST00000569794 ZNF808Q8N4W9 903 aaPredicted RBP7.36□□□□□ -1.23
CHD9-220ENST00000569794 HNRNPLLQ8WVV9 542 aaKnown RBP7.36□□□□□ -1.23
CHD9-220ENST00000569794 NEU4Q8WWR8 484 aaPredicted RBP7.36□□□□□ -1.23
CHD9-220ENST00000569794 CFHR4Q92496 578 aa7.36□□□□□ -1.23
CHD9-220ENST00000569794 C12orf65Q9H3J6 166 aaKnown RBP7.36□□□□□ -1.23
CHD9-220ENST00000569794 ARHGAP28Q9P2N2 729 aa7.36□□□□□ -1.23
CHD9-220ENST00000569794 SRPK3Q9UPE1 567 aa7.36□□□□□ -1.23
CHD9-220ENST00000569794 ASXL2Q76L83 1435 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms