RNA–Protein interactions for RNA: ENST00000569773.1

GDE1-204, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 3

Gene GDE1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-204ENST00000569773 IL16Q14005 1332 aa7.08□□□□□ -1.28
GDE1-204ENST00000569773 IRS2Q9Y4H2 1338 aa7.08□□□□□ -1.28
GDE1-204ENST00000569773 B2RBV5 119 aa7.08□□□□□ -1.28
GDE1-204ENST00000569773 IGF2BP3O00425 579 aaKnown RBP eCLIP7.08□□□□□ -1.28
GDE1-204ENST00000569773 CYP26A1O43174 497 aa7.08□□□□□ -1.28
GDE1-204ENST00000569773 CA12O43570 354 aa7.08□□□□□ -1.28
GDE1-204ENST00000569773 LRRN2O75325 713 aa7.08□□□□□ -1.28
GDE1-204ENST00000569773 TP53P04637 393 aaPredicted RBP7.08□□□□□ -1.28
GDE1-204ENST00000569773 HSP90B1P14625 803 aaKnown RBP7.08□□□□□ -1.28
GDE1-204ENST00000569773 ITIH2P19823 946 aa7.08□□□□□ -1.28
GDE1-204ENST00000569773 PMS1P54277 932 aaKnown RBP7.08□□□□□ -1.28
GDE1-204ENST00000569773 HUNKP57058 714 aa7.08□□□□□ -1.28
GDE1-204ENST00000569773 RAB33AQ14088 237 aa7.08□□□□□ -1.28
GDE1-204ENST00000569773 GNPTABQ3T906 1256 aa7.08□□□□□ -1.28
GDE1-204ENST00000569773 NBPF12Q5TAG4 269 aaPredicted RBP7.08□□□□□ -1.28
GDE1-204ENST00000569773 VHLLQ6RSH7 139 aa7.08□□□□□ -1.28
GDE1-204ENST00000569773 KRT26Q7Z3Y9 468 aa7.08□□□□□ -1.28
GDE1-204ENST00000569773 AGBL3Q8NEM8 1001 aa7.08□□□□□ -1.28
GDE1-204ENST00000569773 MICAL1Q8TDZ2 1067 aa7.08□□□□□ -1.28
GDE1-204ENST00000569773 Q96M66 194 aa7.08□□□□□ -1.28
GDE1-204ENST00000569773 PLA2G12BQ9BX93 195 aa7.08□□□□□ -1.28
GDE1-204ENST00000569773 ASPNQ9BXN1 380 aa7.08□□□□□ -1.28
GDE1-204ENST00000569773 MKRN2Q9H000 416 aaKnown RBP7.08□□□□□ -1.28
GDE1-204ENST00000569773 GREM2Q9H772 168 aa7.08□□□□□ -1.28
GDE1-204ENST00000569773 ST7Q9NRC1 585 aa7.08□□□□□ -1.28
GDE1-204ENST00000569773 ZNF214Q9UL59 606 aaPredicted RBP7.08□□□□□ -1.28
GDE1-204ENST00000569773 MINPP1Q9UNW1 487 aa7.08□□□□□ -1.28
GDE1-204ENST00000569773 OTOFQ9HC10 1997 aa7.08□□□□□ -1.28
GDE1-204ENST00000569773 DDX58O95786 925 aaKnown RBP7.07□□□□□ -1.28
GDE1-204ENST00000569773 CSF1RP07333 972 aa7.07□□□□□ -1.28
GDE1-204ENST00000569773 OXCT1P55809 520 aa7.07□□□□□ -1.28
GDE1-204ENST00000569773 RNF4P78317 190 aa7.07□□□□□ -1.28
GDE1-204ENST00000569773 NOGQ13253 232 aa7.07□□□□□ -1.28
GDE1-204ENST00000569773 GRM1Q13255 1194 aa7.07□□□□□ -1.28
GDE1-204ENST00000569773 FXNQ16595 210 aa7.07□□□□□ -1.28
GDE1-204ENST00000569773 DACT2Q5SW24 774 aa7.07□□□□□ -1.28
GDE1-204ENST00000569773 RGMBQ6NW40 437 aa7.07□□□□□ -1.28
GDE1-204ENST00000569773 C6orf15Q6UXA7 325 aaPredicted RBP7.07□□□□□ -1.28
GDE1-204ENST00000569773 ANKRD18AQ8IVF6 992 aa7.07□□□□□ -1.28
GDE1-204ENST00000569773 CCDC144CPQ8IYA2 1237 aa7.07□□□□□ -1.28
GDE1-204ENST00000569773 MFSD4AQ8N468 514 aa7.07□□□□□ -1.28
GDE1-204ENST00000569773 COX4I2Q96KJ9 171 aa7.07□□□□□ -1.28
GDE1-204ENST00000569773 FBXL18Q96ME1 805 aa7.07□□□□□ -1.28
GDE1-204ENST00000569773 KRTAP4-8Q9BYQ9 185 aa7.07□□□□□ -1.28
GDE1-204ENST00000569773 GBA2Q9HCG7 927 aaPredicted RBP7.07□□□□□ -1.28
GDE1-204ENST00000569773 BSDC1Q9NW68 430 aaPredicted RBP7.07□□□□□ -1.28
GDE1-204ENST00000569773 GGA3Q9NZ52 723 aa7.07□□□□□ -1.28
GDE1-204ENST00000569773 FANCIQ9NVI1 1328 aa7.06□□□□□ -1.28
GDE1-204ENST00000569773 A0A0C4DFX4 3053 aa7.06□□□□□ -1.28
GDE1-204ENST00000569773 MYH13Q9UKX3 1938 aa7.06□□□□□ -1.28
GDE1-204ENST00000569773 DDAH1O94760 285 aa7.06□□□□□ -1.28
GDE1-204ENST00000569773 CEACAM5P06731 702 aa7.06□□□□□ -1.28
GDE1-204ENST00000569773 ZNF865P0CJ78 1059 aaPredicted RBP7.06□□□□□ -1.28
GDE1-204ENST00000569773 FOSL1P15407 271 aa7.06□□□□□ -1.28
GDE1-204ENST00000569773 KIR3DL1P43629 444 aa7.06□□□□□ -1.28
GDE1-204ENST00000569773 CCT4P50991 539 aaKnown RBP7.06□□□□□ -1.28
GDE1-204ENST00000569773 SLC7A5Q01650 507 aa7.06□□□□□ -1.28
GDE1-204ENST00000569773 GCKRQ14397 625 aa7.06□□□□□ -1.28
GDE1-204ENST00000569773 TWISTNBQ3B726 338 aaPredicted RBP7.06□□□□□ -1.28
GDE1-204ENST00000569773 BBS9Q3SYG4 887 aa7.06□□□□□ -1.28
GDE1-204ENST00000569773 KIAA1211LQ6NV74 962 aa7.06□□□□□ -1.28
GDE1-204ENST00000569773 C22orf34Q6ZV56 151 aa7.06□□□□□ -1.28
GDE1-204ENST00000569773 UBE3BQ7Z3V4 1068 aa7.06□□□□□ -1.28
GDE1-204ENST00000569773 PLD6Q8N2A8 252 aaKnown RBP7.06□□□□□ -1.28
GDE1-204ENST00000569773 DTWD2Q8NBA8 298 aa7.06□□□□□ -1.28
GDE1-204ENST00000569773 KLHL6Q8WZ60 621 aa7.06□□□□□ -1.28
GDE1-204ENST00000569773 DCPSQ96C86 337 aaKnown RBP7.06□□□□□ -1.28
GDE1-204ENST00000569773 CDCA5Q96FF9 252 aa7.06□□□□□ -1.28
GDE1-204ENST00000569773 ZBED3Q96IU2 234 aaPredicted RBP7.06□□□□□ -1.28
GDE1-204ENST00000569773 CDC5LQ99459 802 aaKnown RBP7.06□□□□□ -1.28
GDE1-204ENST00000569773 CHMP4AQ9BY43 222 aa7.06□□□□□ -1.28
GDE1-204ENST00000569773 MYOZ2Q9NPC6 264 aa7.06□□□□□ -1.28
GDE1-204ENST00000569773 ZC3H7BQ9UGR2 993 aaKnown RBP7.06□□□□□ -1.28
GDE1-204ENST00000569773 CAPN6Q9Y6Q1 641 aa7.06□□□□□ -1.28
GDE1-204ENST00000569773 VAMP4O75379 141 aa7.05□□□□□ -1.28
GDE1-204ENST00000569773 KLRK1P26718 216 aa7.05□□□□□ -1.28
GDE1-204ENST00000569773 KIF23Q02241 960 aaPredicted RBP7.05□□□□□ -1.28
GDE1-204ENST00000569773 TNK2Q07912 1038 aa7.05□□□□□ -1.28
GDE1-204ENST00000569773 DDR2Q16832 855 aa7.05□□□□□ -1.28
GDE1-204ENST00000569773 NKPD1Q17RQ9 610 aa7.05□□□□□ -1.28
GDE1-204ENST00000569773 NBPF9Q3BBW0 867 aa7.05□□□□□ -1.28
GDE1-204ENST00000569773 AXDND1Q5T1B0 1012 aaPredicted RBP7.05□□□□□ -1.28
GDE1-204ENST00000569773 ANGEL2Q5VTE6 544 aaKnown RBP7.05□□□□□ -1.28
GDE1-204ENST00000569773 DCAF15Q66K64 600 aa7.05□□□□□ -1.28
GDE1-204ENST00000569773 FAM178BQ8IXR5 827 aa7.05□□□□□ -1.28
GDE1-204ENST00000569773 C2orf69Q8N8R5 385 aa7.05□□□□□ -1.28
GDE1-204ENST00000569773 MXD3Q9BW11 206 aa7.05□□□□□ -1.28
GDE1-204ENST00000569773 MCOLN1Q9GZU1 580 aa7.05□□□□□ -1.28
GDE1-204ENST00000569773 MKNK2Q9HBH9 465 aa7.05□□□□□ -1.28
GDE1-204ENST00000569773 SAGE1Q9NXZ1 904 aa7.05□□□□□ -1.28
GDE1-204ENST00000569773 SSC5DA1L4H1 1573 aa7.04□□□□□ -1.28
GDE1-204ENST00000569773 WNT10BO00744 389 aa7.04□□□□□ -1.28
GDE1-204ENST00000569773 GJB6O95452 261 aa7.04□□□□□ -1.28
GDE1-204ENST00000569773 FKBP1BP68106 108 aa7.04□□□□□ -1.28
GDE1-204ENST00000569773 FOXO4P98177 505 aa7.04□□□□□ -1.28
GDE1-204ENST00000569773 NEXNQ0ZGT2 675 aa7.04□□□□□ -1.28
GDE1-204ENST00000569773 SERINC3Q13530 473 aa7.04□□□□□ -1.28
GDE1-204ENST00000569773 SNW1Q13573 536 aaKnown RBP7.04□□□□□ -1.28
GDE1-204ENST00000569773 STRIP1Q5VSL9 837 aa7.04□□□□□ -1.28
GDE1-204ENST00000569773 CDKAL1Q5VV42 579 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms