RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 PPP2R5CQ13362 524 aa5.97□□□□□ -1.45
SF3B3-213ENST00000569687 TNFAIP1Q13829 316 aa5.97□□□□□ -1.45
SF3B3-213ENST00000569687 GIT2Q14161 759 aa5.97□□□□□ -1.45
SF3B3-213ENST00000569687 HSP90AA2PQ14568 343 aaPredicted RBP5.97□□□□□ -1.45
SF3B3-213ENST00000569687 RASA3Q14644 834 aa5.97□□□□□ -1.45
SF3B3-213ENST00000569687 MAN2A1Q16706 1144 aa5.97□□□□□ -1.45
SF3B3-213ENST00000569687 BMT2Q1RMZ1 405 aa5.97□□□□□ -1.45
SF3B3-213ENST00000569687 EDRF1Q3B7T1 1238 aa5.97□□□□□ -1.45
SF3B3-213ENST00000569687 CEP55Q53EZ4 464 aa5.97□□□□□ -1.45
SF3B3-213ENST00000569687 PRR16Q569H4 304 aa5.97□□□□□ -1.45
SF3B3-213ENST00000569687 FAM26FQ5R3K3 315 aa5.97□□□□□ -1.45
SF3B3-213ENST00000569687 FAM83BQ5T0W9 1011 aa5.97□□□□□ -1.45
SF3B3-213ENST00000569687 WDR59Q6PJI9 974 aa5.97□□□□□ -1.45
SF3B3-213ENST00000569687 LRRC55Q6ZSA7 311 aa5.97□□□□□ -1.45
SF3B3-213ENST00000569687 MIGA2Q7L4E1 593 aa5.97□□□□□ -1.45
SF3B3-213ENST00000569687 EPM2AIP1Q7L775 607 aaPredicted RBP5.97□□□□□ -1.45
SF3B3-213ENST00000569687 DYMQ7RTS9 669 aa5.97□□□□□ -1.45
SF3B3-213ENST00000569687 LDHDQ86WU2 507 aa5.97□□□□□ -1.45
SF3B3-213ENST00000569687 MCF2L2Q86YR7 1114 aa5.97□□□□□ -1.45
SF3B3-213ENST00000569687 CCDC170Q8IYT3 715 aa5.97□□□□□ -1.45
SF3B3-213ENST00000569687 PDCL2Q8N4E4 241 aa5.97□□□□□ -1.45
SF3B3-213ENST00000569687 SCFD1Q8WVM8 642 aa5.97□□□□□ -1.45
SF3B3-213ENST00000569687 TBC1D5Q92609 795 aa5.97□□□□□ -1.45
SF3B3-213ENST00000569687 ZNF592Q92610 1267 aa5.97□□□□□ -1.45
SF3B3-213ENST00000569687 CNOT6LQ96LI5 555 aaKnown RBP5.97□□□□□ -1.45
SF3B3-213ENST00000569687 TSG101Q99816 390 aa5.97□□□□□ -1.45
SF3B3-213ENST00000569687 SYT17Q9BSW7 474 aa5.97□□□□□ -1.45
SF3B3-213ENST00000569687 WDR18Q9BV38 432 aa5.97□□□□□ -1.45
SF3B3-213ENST00000569687 NOC4LQ9BVI4 516 aaKnown RBP5.97□□□□□ -1.45
SF3B3-213ENST00000569687 VEZTQ9HBM0 779 aa5.97□□□□□ -1.45
SF3B3-213ENST00000569687 DNAI1Q9UI46 699 aa5.97□□□□□ -1.45
SF3B3-213ENST00000569687 ZNF215Q9UL58 517 aaPredicted RBP5.97□□□□□ -1.45
SF3B3-213ENST00000569687 SIK3Q9Y2K2 1263 aa5.97□□□□□ -1.45
SF3B3-213ENST00000569687 MYH8P13535 1937 aa5.97□□□□□ -1.45
SF3B3-213ENST00000569687 MYH4Q9Y623 1939 aa5.97□□□□□ -1.45
SF3B3-213ENST00000569687 SRCAPQ6ZRS2 3230 aa5.96□□□□□ -1.46
SF3B3-213ENST00000569687 SOWAHDA6NJG2 315 aa5.96□□□□□ -1.46
SF3B3-213ENST00000569687 B4DLN1 442 aa5.96□□□□□ -1.46
SF3B3-213ENST00000569687 C3orf80F5H4A9 247 aa5.96□□□□□ -1.46
SF3B3-213ENST00000569687 SLITRK3O94933 977 aa5.96□□□□□ -1.46
SF3B3-213ENST00000569687 IDEP14735 1019 aa5.96□□□□□ -1.46
SF3B3-213ENST00000569687 GAP43P17677 238 aa5.96□□□□□ -1.46
SF3B3-213ENST00000569687 HOXA13P31271 388 aaPredicted RBP5.96□□□□□ -1.46
SF3B3-213ENST00000569687 CASQ1P31415 396 aa5.96□□□□□ -1.46
SF3B3-213ENST00000569687 ARHGAP25P42331 645 aa5.96□□□□□ -1.46
SF3B3-213ENST00000569687 MTIF2P46199 727 aaKnown RBP5.96□□□□□ -1.46
SF3B3-213ENST00000569687 GNG11P61952 73 aa5.96□□□□□ -1.46
SF3B3-213ENST00000569687 PSMC6P62333 389 aa5.96□□□□□ -1.46
SF3B3-213ENST00000569687 ERVK-24P63145 666 aa5.96□□□□□ -1.46
SF3B3-213ENST00000569687 RBM10P98175 930 aaKnown RBP5.96□□□□□ -1.46
SF3B3-213ENST00000569687 VAC14Q08AM6 782 aa5.96□□□□□ -1.46
SF3B3-213ENST00000569687 NCBP1Q09161 790 aaKnown RBP5.96□□□□□ -1.46
SF3B3-213ENST00000569687 IKQ13123 557 aaPredicted RBP5.96□□□□□ -1.46
SF3B3-213ENST00000569687 MTF1Q14872 753 aa5.96□□□□□ -1.46
SF3B3-213ENST00000569687 EPHA7Q15375 998 aa5.96□□□□□ -1.46
SF3B3-213ENST00000569687 NFIL3Q16649 462 aa5.96□□□□□ -1.46
SF3B3-213ENST00000569687 USH1GQ495M9 461 aa5.96□□□□□ -1.46
SF3B3-213ENST00000569687 HERC4Q5GLZ8 1057 aaPredicted RBP5.96□□□□□ -1.46
SF3B3-213ENST00000569687 FKBP15Q5T1M5 1219 aa5.96□□□□□ -1.46
SF3B3-213ENST00000569687 PRPF38BQ5VTL8 546 aaKnown RBP5.96□□□□□ -1.46
SF3B3-213ENST00000569687 KRT26Q7Z3Y9 468 aa5.96□□□□□ -1.46
SF3B3-213ENST00000569687 GPBP1Q86WP2 473 aa5.96□□□□□ -1.46
SF3B3-213ENST00000569687 SPICE1Q8N0Z3 855 aa5.96□□□□□ -1.46
SF3B3-213ENST00000569687 ZNF397Q8NF99 534 aaPredicted RBP5.96□□□□□ -1.46
SF3B3-213ENST00000569687 CYP2W1Q8TAV3 490 aa5.96□□□□□ -1.46
SF3B3-213ENST00000569687 TMEM174Q8WUU8 243 aa5.96□□□□□ -1.46
SF3B3-213ENST00000569687 CLEC4DQ8WXI8 215 aa5.96□□□□□ -1.46
SF3B3-213ENST00000569687 TSC1Q92574 1164 aa5.96□□□□□ -1.46
SF3B3-213ENST00000569687 SYN2Q92777 582 aaPredicted RBP5.96□□□□□ -1.46
SF3B3-213ENST00000569687 HPS3Q969F9 1004 aa5.96□□□□□ -1.46
SF3B3-213ENST00000569687 GJA10Q969M2 543 aa5.96□□□□□ -1.46
SF3B3-213ENST00000569687 KIFC2Q96AC6 838 aa5.96□□□□□ -1.46
SF3B3-213ENST00000569687 HOOK2Q96ED9 719 aa5.96□□□□□ -1.46
SF3B3-213ENST00000569687 NACC1Q96RE7 527 aa5.96□□□□□ -1.46
SF3B3-213ENST00000569687 RIT2Q99578 217 aa5.96□□□□□ -1.46
SF3B3-213ENST00000569687 EIF2AK1Q9BQI3 630 aaKnown RBP5.96□□□□□ -1.46
SF3B3-213ENST00000569687 MXRA8Q9BRK3 442 aa5.96□□□□□ -1.46
SF3B3-213ENST00000569687 WDR11Q9BZH6 1224 aa5.96□□□□□ -1.46
SF3B3-213ENST00000569687 KCTD10Q9H3F6 313 aa5.96□□□□□ -1.46
SF3B3-213ENST00000569687 NDST4Q9H3R1 872 aa5.96□□□□□ -1.46
SF3B3-213ENST00000569687 MRPL44Q9H9J2 332 aaKnown RBP5.96□□□□□ -1.46
SF3B3-213ENST00000569687 SLC38A10Q9HBR0 1119 aa5.96□□□□□ -1.46
SF3B3-213ENST00000569687 HMX1Q9NP08 348 aaPredicted RBP5.96□□□□□ -1.46
SF3B3-213ENST00000569687 KCND2Q9NZV8 630 aa5.96□□□□□ -1.46
SF3B3-213ENST00000569687 FAM184BQ9ULE4 1060 aa5.96□□□□□ -1.46
SF3B3-213ENST00000569687 PLAGL2Q9UPG8 496 aa5.96□□□□□ -1.46
SF3B3-213ENST00000569687 TRAF3IP3Q9Y228 551 aa5.96□□□□□ -1.46
SF3B3-213ENST00000569687 ZNF536O15090 1300 aa5.96□□□□□ -1.46
SF3B3-213ENST00000569687 RPTORQ8N122 1335 aa5.96□□□□□ -1.46
SF3B3-213ENST00000569687 POTEB3A0JP26 581 aa5.95□□□□□ -1.46
SF3B3-213ENST00000569687 EFCAB8A8MWE9 144 aa5.95□□□□□ -1.46
SF3B3-213ENST00000569687 POTECB2RU33 542 aa5.95□□□□□ -1.46
SF3B3-213ENST00000569687 EIF3CLB5ME19 914 aaKnown RBP5.95□□□□□ -1.46
SF3B3-213ENST00000569687 EML1O00423 815 aa5.95□□□□□ -1.46
SF3B3-213ENST00000569687 TRAF5O00463 557 aa5.95□□□□□ -1.46
SF3B3-213ENST00000569687 PDXKO00764 312 aa5.95□□□□□ -1.46
SF3B3-213ENST00000569687 FANCGO15287 622 aa5.95□□□□□ -1.46
SF3B3-213ENST00000569687 KIF5CO60282 957 aa5.95□□□□□ -1.46
SF3B3-213ENST00000569687 NDUFA10O95299 355 aa5.95□□□□□ -1.46
SF3B3-213ENST00000569687 LYPLA2O95372 231 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms