RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 RTN4Q9NQC3 1192 aaKnown RBP25.04■■□□□ 1.6
VCPKMT-205ENST00000569518 PYCARDQ9ULZ3 195 aa25.04■■□□□ 1.6
VCPKMT-205ENST00000569518 LYPLA2O95372 231 aa25.03■■□□□ 1.6
VCPKMT-205ENST00000569518 KCNA2P16389 499 aa25.03■■□□□ 1.6
VCPKMT-205ENST00000569518 ERCC3P19447 782 aa25.03■■□□□ 1.6
VCPKMT-205ENST00000569518 EEF1GP26641 437 aaKnown RBP25.03■■□□□ 1.6
VCPKMT-205ENST00000569518 COPB2P35606 906 aa25.03■■□□□ 1.6
VCPKMT-205ENST00000569518 LRRC41Q15345 812 aa25.03■■□□□ 1.6
VCPKMT-205ENST00000569518 MYOCDQ8IZQ8 938 aa25.03■■□□□ 1.6
VCPKMT-205ENST00000569518 MS4A4AQ96JQ5 239 aa25.03■■□□□ 1.6
VCPKMT-205ENST00000569518 R3HDMLQ9H3Y0 253 aa25.03■■□□□ 1.6
VCPKMT-205ENST00000569518 ZSWIM4Q9H7M6 989 aa25.03■■□□□ 1.6
VCPKMT-205ENST00000569518 PBX1P40424 430 aa25.02■■□□□ 1.6
VCPKMT-205ENST00000569518 JAK3P52333 1124 aa25.02■■□□□ 1.6
VCPKMT-205ENST00000569518 TBX2Q13207 712 aaPredicted RBP25.02■■□□□ 1.6
VCPKMT-205ENST00000569518 ARMCX5Q6P1M9 558 aa25.02■■□□□ 1.6
VCPKMT-205ENST00000569518 CDHR1Q96JP9 859 aa25.02■■□□□ 1.6
VCPKMT-205ENST00000569518 SENP7Q9BQF6 1050 aa25.02■■□□□ 1.6
VCPKMT-205ENST00000569518 WDR81Q562E7 1941 aa25.02■■□□□ 1.6
VCPKMT-205ENST00000569518 SPATA31C2B4DYI2 1134 aa25.02■■□□□ 1.6
VCPKMT-205ENST00000569518 TEX33O43247 280 aa25.02■■□□□ 1.6
VCPKMT-205ENST00000569518 SFNP31947 248 aa25.02■■□□□ 1.6
VCPKMT-205ENST00000569518 ALDH5A1P51649 535 aaPredicted RBP25.02■■□□□ 1.6
VCPKMT-205ENST00000569518 COPB1P53618 953 aaKnown RBP25.02■■□□□ 1.6
VCPKMT-205ENST00000569518 LRRC63Q05C16 580 aa25.02■■□□□ 1.6
VCPKMT-205ENST00000569518 PTPN21Q16825 1174 aa25.02■■□□□ 1.6
VCPKMT-205ENST00000569518 ZCWPW2Q504Y3 356 aa25.02■■□□□ 1.6
VCPKMT-205ENST00000569518 FAM133AQ8N9E0 248 aa25.02■■□□□ 1.6
VCPKMT-205ENST00000569518 CCDC150Q8NCX0 1101 aa25.02■■□□□ 1.6
VCPKMT-205ENST00000569518 RDM1Q8NG50 284 aa25.02■■□□□ 1.6
VCPKMT-205ENST00000569518 KIAA1524Q8TCG1 905 aa25.02■■□□□ 1.6
VCPKMT-205ENST00000569518 KCND2Q9NZV8 630 aa25.02■■□□□ 1.6
VCPKMT-205ENST00000569518 NFASCO94856 1347 aa25.02■■□□□ 1.6
VCPKMT-205ENST00000569518 WDR64B1ANS9 1081 aa25.01■■□□□ 1.59
VCPKMT-205ENST00000569518 EDNRBP24530 442 aa25.01■■□□□ 1.59
VCPKMT-205ENST00000569518 Q3C1V9 767 aa25.01■■□□□ 1.59
VCPKMT-205ENST00000569518 SPECC1LQ69YQ0 1117 aa25.01■■□□□ 1.59
VCPKMT-205ENST00000569518 ZNF746Q6NUN9 644 aaPredicted RBP25.01■■□□□ 1.59
VCPKMT-205ENST00000569518 ANKRD20A12PQ8NF67 263 aa25.01■■□□□ 1.59
VCPKMT-205ENST00000569518 TBC1D7Q9P0N9 293 aa25.01■■□□□ 1.59
VCPKMT-205ENST00000569518 DOCK5Q9H7D0 1870 aa25.01■■□□□ 1.59
VCPKMT-205ENST00000569518 SOWAHBA6NEL2 793 aa25■■□□□ 1.59
VCPKMT-205ENST00000569518 RSPH10B2B2RC85 870 aa25■■□□□ 1.59
VCPKMT-205ENST00000569518 RSPH10BP0C881 870 aa25■■□□□ 1.59
VCPKMT-205ENST00000569518 CETPP11597 493 aa25■■□□□ 1.59
VCPKMT-205ENST00000569518 QARSP47897 775 aaKnown RBP25■■□□□ 1.59
VCPKMT-205ENST00000569518 FSTL1Q12841 308 aa25■■□□□ 1.59
VCPKMT-205ENST00000569518 STXBP2Q15833 593 aa25■■□□□ 1.59
VCPKMT-205ENST00000569518 GNPTABQ3T906 1256 aa25■■□□□ 1.59
VCPKMT-205ENST00000569518 SFR1Q86XK3 245 aa25■■□□□ 1.59
VCPKMT-205ENST00000569518 SCFD1Q8WVM8 642 aa25■■□□□ 1.59
VCPKMT-205ENST00000569518 SLC45A1Q9Y2W3 748 aa25■■□□□ 1.59
VCPKMT-205ENST00000569518 SAMM50Q9Y512 469 aa25■■□□□ 1.59
VCPKMT-205ENST00000569518 POTEB2H3BUK9 544 aa25■■□□□ 1.59
VCPKMT-205ENST00000569518 EIF3JO75822 258 aaKnown RBP25■■□□□ 1.59
VCPKMT-205ENST00000569518 ICAM3P32942 547 aa25■■□□□ 1.59
VCPKMT-205ENST00000569518 CCZ1BP86790 482 aa25■■□□□ 1.59
VCPKMT-205ENST00000569518 CCZ1P86791 482 aaPredicted RBP25■■□□□ 1.59
VCPKMT-205ENST00000569518 FILIP1LQ4L180 1135 aa25■■□□□ 1.59
VCPKMT-205ENST00000569518 EPM2AIP1Q7L775 607 aaPredicted RBP25■■□□□ 1.59
VCPKMT-205ENST00000569518 TAB2Q9NYJ8 693 aa25■■□□□ 1.59
VCPKMT-205ENST00000569518 DBR1Q9UK59 544 aaKnown RBP25■■□□□ 1.59
VCPKMT-205ENST00000569518 PNMA3Q9UL41 463 aa25■■□□□ 1.59
VCPKMT-205ENST00000569518 TBCAO75347 108 aaKnown RBP24.99■■□□□ 1.59
VCPKMT-205ENST00000569518 CELF2O95319 508 aaKnown RBP24.99■■□□□ 1.59
VCPKMT-205ENST00000569518 GTF2A2P52657 109 aa24.99■■□□□ 1.59
VCPKMT-205ENST00000569518 UGCGQ16739 394 aa24.99■■□□□ 1.59
VCPKMT-205ENST00000569518 COL4A3BPQ9Y5P4 624 aa24.99■■□□□ 1.59
VCPKMT-205ENST00000569518 GAP43P17677 238 aa24.98■■□□□ 1.59
VCPKMT-205ENST00000569518 ZNF131P52739 623 aa24.98■■□□□ 1.59
VCPKMT-205ENST00000569518 LRRC55Q6ZSA7 311 aa24.98■■□□□ 1.59
VCPKMT-205ENST00000569518 C2orf69Q8N8R5 385 aa24.98■■□□□ 1.59
VCPKMT-205ENST00000569518 GTF3C2Q8WUA4 911 aaPredicted RBP24.98■■□□□ 1.59
VCPKMT-205ENST00000569518 ZHX3Q9H4I2 956 aa24.98■■□□□ 1.59
VCPKMT-205ENST00000569518 NMRK2Q9NPI5 230 aa24.98■■□□□ 1.59
VCPKMT-205ENST00000569518 OLFML3Q9NRN5 406 aa24.98■■□□□ 1.59
VCPKMT-205ENST00000569518 TCEAL9Q9UHQ7 104 aa24.98■■□□□ 1.59
VCPKMT-205ENST00000569518 N4BP3O15049 544 aa24.98■■□□□ 1.59
VCPKMT-205ENST00000569518 CYP2C8P10632 490 aa24.98■■□□□ 1.59
VCPKMT-205ENST00000569518 GUCY2CP25092 1073 aa24.98■■□□□ 1.59
VCPKMT-205ENST00000569518 CASP5P51878 434 aa24.98■■□□□ 1.59
VCPKMT-205ENST00000569518 FAM114A1Q8IWE2 563 aa24.98■■□□□ 1.59
VCPKMT-205ENST00000569518 C4orf19Q8IY42 314 aa24.98■■□□□ 1.59
VCPKMT-205ENST00000569518 BRI3BPQ8WY22 251 aa24.98■■□□□ 1.59
VCPKMT-205ENST00000569518 KCTD10Q9H3F6 313 aa24.98■■□□□ 1.59
VCPKMT-205ENST00000569518 DNAJC25-GNG10A0A024R161 153 aa24.97■■□□□ 1.59
VCPKMT-205ENST00000569518 SFPQP23246 707 aaKnown RBP eCLIP24.97■■□□□ 1.59
VCPKMT-205ENST00000569518 PSMC5P62195 406 aa24.97■■□□□ 1.59
VCPKMT-205ENST00000569518 ERVK-9P63128 1117 aa24.97■■□□□ 1.59
VCPKMT-205ENST00000569518 ERVK-24P63145 666 aa24.97■■□□□ 1.59
VCPKMT-205ENST00000569518 SMAP1Q8IYB5 467 aaPredicted RBP24.97■■□□□ 1.59
VCPKMT-205ENST00000569518 SHCBP1Q8NEM2 672 aa24.97■■□□□ 1.59
VCPKMT-205ENST00000569518 CNOT6LQ96LI5 555 aaKnown RBP24.97■■□□□ 1.59
VCPKMT-205ENST00000569518 FGD4Q96M96 766 aa24.97■■□□□ 1.59
VCPKMT-205ENST00000569518 VPS16Q9H269 839 aa24.97■■□□□ 1.59
VCPKMT-205ENST00000569518 MROH8Q9H579 483 aa24.97■■□□□ 1.59
VCPKMT-205ENST00000569518 BCAS3Q9H6U6 928 aa24.97■■□□□ 1.59
VCPKMT-205ENST00000569518 JPH1Q9HDC5 661 aaPredicted RBP24.97■■□□□ 1.59
VCPKMT-205ENST00000569518 MAGEC2Q9UBF1 373 aaPredicted RBP24.97■■□□□ 1.59
VCPKMT-205ENST00000569518 ODF2LQ9ULJ1 636 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms