RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 GJB2P29033 226 aa16.4■□□□□ 0.22
COMMD4-225ENST00000569245 HOXC8P31273 242 aa16.4■□□□□ 0.22
COMMD4-225ENST00000569245 PBX2P40425 430 aa16.4■□□□□ 0.22
COMMD4-225ENST00000569245 STAT5BP51692 787 aa16.4■□□□□ 0.22
COMMD4-225ENST00000569245 IGBP1P78318 339 aa16.4■□□□□ 0.22
COMMD4-225ENST00000569245 RBL2Q08999 1139 aa16.4■□□□□ 0.22
COMMD4-225ENST00000569245 GALNT17Q6IS24 598 aa16.4■□□□□ 0.22
COMMD4-225ENST00000569245 LMBR1Q8WVP7 490 aa16.4■□□□□ 0.22
COMMD4-225ENST00000569245 TNPO1Q92973 898 aaKnown RBP16.4■□□□□ 0.22
COMMD4-225ENST00000569245 PBX4Q9BYU1 374 aa16.4■□□□□ 0.22
COMMD4-225ENST00000569245 ORC3Q9UBD5 711 aaPredicted RBP16.4■□□□□ 0.22
COMMD4-225ENST00000569245 CIZ1Q9ULV3 898 aaPredicted RBP16.4■□□□□ 0.22
COMMD4-225ENST00000569245 KCNJ14Q9UNX9 436 aa16.4■□□□□ 0.22
COMMD4-225ENST00000569245 TRPC6Q9Y210 931 aa16.4■□□□□ 0.22
COMMD4-225ENST00000569245 STK36Q9NRP7 1315 aa16.4■□□□□ 0.22
COMMD4-225ENST00000569245 JAK2O60674 1132 aa16.39■□□□□ 0.21
COMMD4-225ENST00000569245 NBNO60934 754 aa16.39■□□□□ 0.21
COMMD4-225ENST00000569245 LGR5O75473 907 aa16.39■□□□□ 0.21
COMMD4-225ENST00000569245 USP11P51784 963 aa16.39■□□□□ 0.21
COMMD4-225ENST00000569245 RAB30Q15771 203 aa16.39■□□□□ 0.21
COMMD4-225ENST00000569245 GRIK4Q16099 956 aa16.39■□□□□ 0.21
COMMD4-225ENST00000569245 MIS18BP1Q6P0N0 1132 aa16.39■□□□□ 0.21
COMMD4-225ENST00000569245 FAM177A1Q8N128 213 aaPredicted RBP16.39■□□□□ 0.21
COMMD4-225ENST00000569245 TBCKQ8TEA7 893 aa16.39■□□□□ 0.21
COMMD4-225ENST00000569245 WASF1Q92558 559 aa16.39■□□□□ 0.21
COMMD4-225ENST00000569245 PCYT2Q99447 389 aa16.39■□□□□ 0.21
COMMD4-225ENST00000569245 TTYH1Q9H313 450 aaPredicted RBP16.39■□□□□ 0.21
COMMD4-225ENST00000569245 TBC1D22BQ9NU19 505 aa16.39■□□□□ 0.21
COMMD4-225ENST00000569245 EMSYQ7Z589 1322 aa16.39■□□□□ 0.21
COMMD4-225ENST00000569245 TMEM265A0A087WTH1 108 aa16.38■□□□□ 0.21
COMMD4-225ENST00000569245 BAIAP3O94812 1187 aa16.38■□□□□ 0.21
COMMD4-225ENST00000569245 CCNE2O96020 404 aa16.38■□□□□ 0.21
COMMD4-225ENST00000569245 CTSHP09668 335 aa16.38■□□□□ 0.21
COMMD4-225ENST00000569245 FDPSP14324 419 aaKnown RBP16.38■□□□□ 0.21
COMMD4-225ENST00000569245 CIITAP33076 1130 aa16.38■□□□□ 0.21
COMMD4-225ENST00000569245 KCNJ6P48051 423 aa16.38■□□□□ 0.21
COMMD4-225ENST00000569245 RABGGTBP53611 331 aa16.38■□□□□ 0.21
COMMD4-225ENST00000569245 GPNMBQ14956 572 aa16.38■□□□□ 0.21
COMMD4-225ENST00000569245 FAM160B1Q5W0V3 765 aa16.38■□□□□ 0.21
COMMD4-225ENST00000569245 PLPPR4Q7Z2D5 763 aa16.38■□□□□ 0.21
COMMD4-225ENST00000569245 GUCD1Q96NT3 240 aa16.38■□□□□ 0.21
COMMD4-225ENST00000569245 ZNF576Q9H609 170 aa16.38■□□□□ 0.21
COMMD4-225ENST00000569245 TUBE1Q9UJT0 475 aa16.38■□□□□ 0.21
COMMD4-225ENST00000569245 STXBP5LQ9Y2K9 1186 aa16.38■□□□□ 0.21
COMMD4-225ENST00000569245 KIF3AQ9Y496 699 aa16.38■□□□□ 0.21
COMMD4-225ENST00000569245 SAMM50Q9Y512 469 aa16.38■□□□□ 0.21
COMMD4-225ENST00000569245 DHX15O43143 795 aaKnown RBP16.37■□□□□ 0.21
COMMD4-225ENST00000569245 CAND2O75155 1236 aa16.37■□□□□ 0.21
COMMD4-225ENST00000569245 CXCL10P02778 98 aa16.37■□□□□ 0.21
COMMD4-225ENST00000569245 PDIA4P13667 645 aaKnown RBP16.37■□□□□ 0.21
COMMD4-225ENST00000569245 INSRRP14616 1297 aa16.37■□□□□ 0.21
COMMD4-225ENST00000569245 IKBKEQ14164 716 aa16.37■□□□□ 0.21
COMMD4-225ENST00000569245 NONOQ15233 471 aaKnown RBP eCLIP16.37■□□□□ 0.21
COMMD4-225ENST00000569245 SWSAP1Q6NVH7 229 aa16.37■□□□□ 0.21
COMMD4-225ENST00000569245 TAF2Q6P1X5 1199 aa16.37■□□□□ 0.21
COMMD4-225ENST00000569245 CNKSR3Q6P9H4 555 aa16.37■□□□□ 0.21
COMMD4-225ENST00000569245 TRAF7Q6Q0C0 670 aa16.37■□□□□ 0.21
COMMD4-225ENST00000569245 ABHD15Q6UXT9 468 aa16.37■□□□□ 0.21
COMMD4-225ENST00000569245 KRT25Q7Z3Z0 450 aa16.37■□□□□ 0.21
COMMD4-225ENST00000569245 RSPH3Q86UC2 560 aa16.37■□□□□ 0.21
COMMD4-225ENST00000569245 CKAP2LQ8IYA6 745 aa16.37■□□□□ 0.21
COMMD4-225ENST00000569245 DAGLBQ8NCG7 672 aa16.37■□□□□ 0.21
COMMD4-225ENST00000569245 CDX2Q99626 313 aaPredicted RBP16.37■□□□□ 0.21
COMMD4-225ENST00000569245 ZNF302Q9NR11 478 aa16.37■□□□□ 0.21
COMMD4-225ENST00000569245 CCDC194A0A1B0GVG4 234 aa16.36■□□□□ 0.21
COMMD4-225ENST00000569245 POTEB3A0JP26 581 aa16.36■□□□□ 0.21
COMMD4-225ENST00000569245 RRN3P2A6NIE6 340 aa16.36■□□□□ 0.21
COMMD4-225ENST00000569245 ATG7O95352 703 aa16.36■□□□□ 0.21
COMMD4-225ENST00000569245 PDCP20941 246 aa16.36■□□□□ 0.21
COMMD4-225ENST00000569245 SLC26A2P50443 739 aa16.36■□□□□ 0.21
COMMD4-225ENST00000569245 ADAM17P78536 824 aa16.36■□□□□ 0.21
COMMD4-225ENST00000569245 KRT76Q01546 638 aa16.36■□□□□ 0.21
COMMD4-225ENST00000569245 MBTPS1Q14703 1052 aa16.36■□□□□ 0.21
COMMD4-225ENST00000569245 PLCB4Q15147 1175 aa16.36■□□□□ 0.21
COMMD4-225ENST00000569245 ZNF746Q6NUN9 644 aaPredicted RBP16.36■□□□□ 0.21
COMMD4-225ENST00000569245 PDXDC2PQ6P474 469 aa16.36■□□□□ 0.21
COMMD4-225ENST00000569245 POTEBQ6S5H4 581 aa16.36■□□□□ 0.21
COMMD4-225ENST00000569245 RUFY4Q6ZNE9 571 aa16.36■□□□□ 0.21
COMMD4-225ENST00000569245 FAM184AQ8NB25 1140 aa16.36■□□□□ 0.21
COMMD4-225ENST00000569245 PHOSPHO2Q8TCD6 241 aa16.36■□□□□ 0.21
COMMD4-225ENST00000569245 SLC9A7Q96T83 725 aa16.36■□□□□ 0.21
COMMD4-225ENST00000569245 PHF20Q9BVI0 1012 aa16.36■□□□□ 0.21
COMMD4-225ENST00000569245 NKX2-4Q9H2Z4 354 aa16.36■□□□□ 0.21
COMMD4-225ENST00000569245 SLC28A3Q9HAS3 691 aa16.36■□□□□ 0.21
COMMD4-225ENST00000569245 GJB4Q9NTQ9 266 aa16.36■□□□□ 0.21
COMMD4-225ENST00000569245 DOCK5Q9H7D0 1870 aa16.35■□□□□ 0.21
COMMD4-225ENST00000569245 ABHD14A-ACY1A0A1B0GW23 586 aa16.35■□□□□ 0.21
COMMD4-225ENST00000569245 KIF28PB7ZC32 967 aa16.35■□□□□ 0.21
COMMD4-225ENST00000569245 M0R2N6 131 aa16.35■□□□□ 0.21
COMMD4-225ENST00000569245 MSH4O15457 936 aa16.35■□□□□ 0.21
COMMD4-225ENST00000569245 GAS7O60861 476 aa16.35■□□□□ 0.21
COMMD4-225ENST00000569245 PSAPP07602 524 aa16.35■□□□□ 0.21
COMMD4-225ENST00000569245 MYOGP15173 224 aa16.35■□□□□ 0.21
COMMD4-225ENST00000569245 GRIN2CQ14957 1233 aa16.35■□□□□ 0.21
COMMD4-225ENST00000569245 NPY5RQ15761 445 aa16.35■□□□□ 0.21
COMMD4-225ENST00000569245 INF2Q27J81 1249 aa16.35■□□□□ 0.21
COMMD4-225ENST00000569245 MARCH8Q5T0T0 291 aa16.35■□□□□ 0.21
COMMD4-225ENST00000569245 TRMT1LQ7Z2T5 733 aaKnown RBP16.35■□□□□ 0.21
COMMD4-225ENST00000569245 SMAP1Q8IYB5 467 aaPredicted RBP16.35■□□□□ 0.21
COMMD4-225ENST00000569245 DNAJB3Q8WWF6 145 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms