RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 MAN2B1O00754 1011 aa4.89□□□□□ -1.63
HMGB1P6-201ENST00000569046 PLD2O14939 933 aa4.89□□□□□ -1.63
HMGB1P6-201ENST00000569046 INHBBP09529 407 aa4.89□□□□□ -1.63
HMGB1P6-201ENST00000569046 KRT15P19012 456 aa4.89□□□□□ -1.63
HMGB1P6-201ENST00000569046 THBS2P35442 1172 aa4.89□□□□□ -1.63
HMGB1P6-201ENST00000569046 DNM2P50570 870 aa4.89□□□□□ -1.63
HMGB1P6-201ENST00000569046 HSPA2P54652 639 aa4.89□□□□□ -1.63
HMGB1P6-201ENST00000569046 SLURP1P55000 103 aa4.89□□□□□ -1.63
HMGB1P6-201ENST00000569046 GPR19Q15760 415 aa4.89□□□□□ -1.63
HMGB1P6-201ENST00000569046 PAN2Q504Q3 1202 aaKnown RBP4.89□□□□□ -1.63
HMGB1P6-201ENST00000569046 PRR31Q5SQ13 230 aa4.89□□□□□ -1.63
HMGB1P6-201ENST00000569046 FSTL4Q6MZW2 842 aa4.89□□□□□ -1.63
HMGB1P6-201ENST00000569046 TMC5Q6UXY8 1006 aa4.89□□□□□ -1.63
HMGB1P6-201ENST00000569046 PTRH1Q86Y79 214 aaKnown RBP4.89□□□□□ -1.63
HMGB1P6-201ENST00000569046 TRIM48Q8IWZ4 208 aa4.89□□□□□ -1.63
HMGB1P6-201ENST00000569046 FEZF2Q8TBJ5 459 aa4.89□□□□□ -1.63
HMGB1P6-201ENST00000569046 MAGEB10Q96LZ2 347 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P6-201ENST00000569046 ZSWIM3Q96MP5 696 aa4.89□□□□□ -1.63
HMGB1P6-201ENST00000569046 PUS7Q96PZ0 661 aaKnown RBP4.89□□□□□ -1.63
HMGB1P6-201ENST00000569046 SPATA25Q9BR10 227 aa4.89□□□□□ -1.63
HMGB1P6-201ENST00000569046 PDGFDQ9GZP0 370 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P6-201ENST00000569046 XYLT2Q9H1B5 865 aa4.89□□□□□ -1.63
HMGB1P6-201ENST00000569046 SMURF1Q9HCE7 757 aa4.89□□□□□ -1.63
HMGB1P6-201ENST00000569046 HSPBP1Q9NZL4 362 aa4.89□□□□□ -1.63
HMGB1P6-201ENST00000569046 MADDQ8WXG6 1647 aa4.89□□□□□ -1.63
HMGB1P6-201ENST00000569046 ADAMTSL3P82987 1691 aa4.89□□□□□ -1.63
HMGB1P6-201ENST00000569046 TEX14Q8IWB6 1497 aa4.88□□□□□ -1.63
HMGB1P6-201ENST00000569046 OTOL1A6NHN0 477 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P6-201ENST00000569046 HSP90B1P14625 803 aaKnown RBP4.88□□□□□ -1.63
HMGB1P6-201ENST00000569046 FAHP16930 419 aa4.88□□□□□ -1.63
HMGB1P6-201ENST00000569046 NAT1P18440 290 aa4.88□□□□□ -1.63
HMGB1P6-201ENST00000569046 LACTBP83111 547 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P6-201ENST00000569046 SEC23AQ15436 765 aa4.88□□□□□ -1.63
HMGB1P6-201ENST00000569046 PHF19Q5T6S3 580 aa4.88□□□□□ -1.63
HMGB1P6-201ENST00000569046 TTLL10Q6ZVT0 673 aa4.88□□□□□ -1.63
HMGB1P6-201ENST00000569046 JAZF1Q86VZ6 243 aa4.88□□□□□ -1.63
HMGB1P6-201ENST00000569046 CARFQ8N187 725 aa4.88□□□□□ -1.63
HMGB1P6-201ENST00000569046 CISD2Q8N5K1 135 aaKnown RBP4.88□□□□□ -1.63
HMGB1P6-201ENST00000569046 C20orf173Q96LM9 149 aa4.88□□□□□ -1.63
HMGB1P6-201ENST00000569046 PARD6AQ9NPB6 346 aa4.88□□□□□ -1.63
HMGB1P6-201ENST00000569046 NGRNQ9NPE2 291 aaKnown RBP4.88□□□□□ -1.63
HMGB1P6-201ENST00000569046 MRPL42Q9Y6G3 142 aaKnown RBP4.88□□□□□ -1.63
HMGB1P6-201ENST00000569046 CARMIL1Q5VZK9 1371 aa4.88□□□□□ -1.63
HMGB1P6-201ENST00000569046 UHRF1BP1LA0JNW5 1464 aa4.88□□□□□ -1.63
HMGB1P6-201ENST00000569046 PTPRMP28827 1452 aa4.88□□□□□ -1.63
HMGB1P6-201ENST00000569046 KDM5BQ9UGL1 1544 aa4.87□□□□□ -1.63
HMGB1P6-201ENST00000569046 KIAA0556O60303 1618 aa4.87□□□□□ -1.63
HMGB1P6-201ENST00000569046 CTTNBP2Q8WZ74 1663 aa4.87□□□□□ -1.63
HMGB1P6-201ENST00000569046 BCORL1Q5H9F3 1711 aa4.87□□□□□ -1.63
HMGB1P6-201ENST00000569046 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P6-201ENST00000569046 SMARCA5O60264 1052 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P6-201ENST00000569046 ASMTLO95671 621 aa4.87□□□□□ -1.63
HMGB1P6-201ENST00000569046 SDSP20132 328 aa4.87□□□□□ -1.63
HMGB1P6-201ENST00000569046 ST5P78524 1137 aa4.87□□□□□ -1.63
HMGB1P6-201ENST00000569046 CRY1Q16526 586 aa4.87□□□□□ -1.63
HMGB1P6-201ENST00000569046 C21orf62-AS1Q17RA5 79 aa4.87□□□□□ -1.63
HMGB1P6-201ENST00000569046 TKFCQ3LXA3 575 aa4.87□□□□□ -1.63
HMGB1P6-201ENST00000569046 FNDC3BQ53EP0 1204 aaKnown RBP4.87□□□□□ -1.63
HMGB1P6-201ENST00000569046 TM4SF20Q53R12 229 aa4.87□□□□□ -1.63
HMGB1P6-201ENST00000569046 FAM47CQ5HY64 1035 aa4.87□□□□□ -1.63
HMGB1P6-201ENST00000569046 OVCH1Q7RTY7 1134 aa4.87□□□□□ -1.63
HMGB1P6-201ENST00000569046 ZDHHC14Q8IZN3 488 aa4.87□□□□□ -1.63
HMGB1P6-201ENST00000569046 CELF4Q9BZC1 486 aaKnown RBP4.87□□□□□ -1.63
HMGB1P6-201ENST00000569046 ZCCHC4Q9H5U6 513 aa4.87□□□□□ -1.63
HMGB1P6-201ENST00000569046 PCDH18Q9HCL0 1135 aa4.87□□□□□ -1.63
HMGB1P6-201ENST00000569046 LUC7LQ9NQ29 371 aaKnown RBP4.87□□□□□ -1.63
HMGB1P6-201ENST00000569046 NTMQ9P121 344 aa4.87□□□□□ -1.63
HMGB1P6-201ENST00000569046 ARID4BQ4LE39 1312 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P6-201ENST00000569046 DISP3Q9P2K9 1392 aa4.87□□□□□ -1.63
HMGB1P6-201ENST00000569046 CD109Q6YHK3 1445 aa4.87□□□□□ -1.63
HMGB1P6-201ENST00000569046 KIF27Q86VH2 1401 aa4.87□□□□□ -1.63
HMGB1P6-201ENST00000569046 SIGLEC1Q9BZZ2 1709 aa4.86□□□□□ -1.63
HMGB1P6-201ENST00000569046 A0A0G2JLL6 359 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P6-201ENST00000569046 DNAJC8O75937 253 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P6-201ENST00000569046 PTPN1P18031 435 aaKnown RBP4.86□□□□□ -1.63
HMGB1P6-201ENST00000569046 HOXA5P20719 270 aa4.86□□□□□ -1.63
HMGB1P6-201ENST00000569046 RPL13P26373 211 aaKnown RBP4.86□□□□□ -1.63
HMGB1P6-201ENST00000569046 SARSP49591 514 aaKnown RBP4.86□□□□□ -1.63
HMGB1P6-201ENST00000569046 MLLT6P55198 1093 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P6-201ENST00000569046 ZNF460Q14592 562 aa4.86□□□□□ -1.63
HMGB1P6-201ENST00000569046 BTBD8Q5XKL5 378 aa4.86□□□□□ -1.63
HMGB1P6-201ENST00000569046 CD276Q5ZPR3 534 aa4.86□□□□□ -1.63
HMGB1P6-201ENST00000569046 CPZQ66K79 652 aa4.86□□□□□ -1.63
HMGB1P6-201ENST00000569046 TTLL7Q6ZT98 887 aa4.86□□□□□ -1.63
HMGB1P6-201ENST00000569046 TTLL6Q8N841 843 aa4.86□□□□□ -1.63
HMGB1P6-201ENST00000569046 IGSF22Q8N9C0 903 aa4.86□□□□□ -1.63
HMGB1P6-201ENST00000569046 WDR7Q9Y4E6 1490 aa4.86□□□□□ -1.63
HMGB1P6-201ENST00000569046 DDX3XO00571 662 aaKnown RBP eCLIP4.85□□□□□ -1.63
HMGB1P6-201ENST00000569046 GSTA4O15217 222 aa4.85□□□□□ -1.63
HMGB1P6-201ENST00000569046 HMGB1P09429 215 aaKnown RBP4.85□□□□□ -1.63
HMGB1P6-201ENST00000569046 ZNF28P17035 718 aa4.85□□□□□ -1.63
HMGB1P6-201ENST00000569046 KCNC1P48547 511 aa4.85□□□□□ -1.63
HMGB1P6-201ENST00000569046 PFKPQ01813 784 aa4.85□□□□□ -1.63
HMGB1P6-201ENST00000569046 PABPC4Q13310 644 aaKnown RBP eCLIP4.85□□□□□ -1.63
HMGB1P6-201ENST00000569046 SKIDA1Q1XH10 827 aa4.85□□□□□ -1.63
HMGB1P6-201ENST00000569046 FIGNQ5HY92 759 aa4.85□□□□□ -1.63
HMGB1P6-201ENST00000569046 HHIPL2Q6UWX4 724 aa4.85□□□□□ -1.63
HMGB1P6-201ENST00000569046 ZNF761Q86XN6 746 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P6-201ENST00000569046 NOSTRINQ8IVI9 506 aa4.85□□□□□ -1.63
HMGB1P6-201ENST00000569046 SP8Q8IXZ3 490 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms