RNA–Protein interactions for RNA: ENST00000568890.5

CNEP1R1-210, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CNEP1R1, Length 1,992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-210ENST00000568890 RTP1P59025 263 aa18.75■□□□□ 0.59
CNEP1R1-210ENST00000568890 ATP2C1P98194 919 aaPredicted RBP18.75■□□□□ 0.59
CNEP1R1-210ENST00000568890 CEBPZQ03701 1054 aaKnown RBP18.75■□□□□ 0.59
CNEP1R1-210ENST00000568890 PTPAQ15257 358 aa18.75■□□□□ 0.59
CNEP1R1-210ENST00000568890 TRMT1LQ7Z2T5 733 aaKnown RBP18.75■□□□□ 0.59
CNEP1R1-210ENST00000568890 TRMT13Q9NUP7 481 aaKnown RBP18.75■□□□□ 0.59
CNEP1R1-210ENST00000568890 RGL1Q9NZL6 768 aa18.75■□□□□ 0.59
CNEP1R1-210ENST00000568890 GABBR1Q9UBS5 961 aa18.75■□□□□ 0.59
CNEP1R1-210ENST00000568890 ANP32AP39687 249 aaKnown RBP18.75■□□□□ 0.59
CNEP1R1-210ENST00000568890 MIS18BP1Q6P0N0 1132 aa18.75■□□□□ 0.59
CNEP1R1-210ENST00000568890 PLPPR4Q7Z2D5 763 aa18.75■□□□□ 0.59
CNEP1R1-210ENST00000568890 ANKRD33Q7Z3H0 272 aa18.75■□□□□ 0.59
CNEP1R1-210ENST00000568890 MIER3Q7Z3K6 550 aa18.75■□□□□ 0.59
CNEP1R1-210ENST00000568890 AFAP1L1Q8TED9 768 aa18.75■□□□□ 0.59
CNEP1R1-210ENST00000568890 SMARCAD1Q9H4L7 1026 aa18.75■□□□□ 0.59
CNEP1R1-210ENST00000568890 ATP11BQ9Y2G3 1177 aa18.75■□□□□ 0.59
CNEP1R1-210ENST00000568890 LAMA2P24043 3122 aaKnown RBP18.75■□□□□ 0.59
CNEP1R1-210ENST00000568890 BACH1O14867 736 aa18.74■□□□□ 0.59
CNEP1R1-210ENST00000568890 B4GALT4O60513 344 aa18.74■□□□□ 0.59
CNEP1R1-210ENST00000568890 PQBP1O60828 265 aaKnown RBP18.74■□□□□ 0.59
CNEP1R1-210ENST00000568890 STBD1O95210 358 aa18.74■□□□□ 0.59
CNEP1R1-210ENST00000568890 CDC25AP30304 524 aa18.74■□□□□ 0.59
CNEP1R1-210ENST00000568890 GRIN1Q05586 938 aa18.74■□□□□ 0.59
CNEP1R1-210ENST00000568890 FAAP100Q0VG06 881 aa18.74■□□□□ 0.59
CNEP1R1-210ENST00000568890 PLCB4Q15147 1175 aa18.74■□□□□ 0.59
CNEP1R1-210ENST00000568890 GDF6Q6KF10 455 aaPredicted RBP18.74■□□□□ 0.59
CNEP1R1-210ENST00000568890 FAM126BQ8IXS8 530 aa18.74■□□□□ 0.59
CNEP1R1-210ENST00000568890 ZBTB10Q96DT7 871 aa18.74■□□□□ 0.59
CNEP1R1-210ENST00000568890 HSD17B14Q9BPX1 270 aa18.74■□□□□ 0.59
CNEP1R1-210ENST00000568890 ZNF302Q9NR11 478 aa18.74■□□□□ 0.59
CNEP1R1-210ENST00000568890 SETD4Q9NVD3 440 aa18.74■□□□□ 0.59
CNEP1R1-210ENST00000568890 ERAP1Q9NZ08 941 aa18.74■□□□□ 0.59
CNEP1R1-210ENST00000568890 ZBTB39O15060 712 aa18.73■□□□□ 0.59
CNEP1R1-210ENST00000568890 SLITRK3O94933 977 aa18.73■□□□□ 0.59
CNEP1R1-210ENST00000568890 PSAPP07602 524 aa18.73■□□□□ 0.59
CNEP1R1-210ENST00000568890 PDIA4P13667 645 aaKnown RBP18.73■□□□□ 0.59
CNEP1R1-210ENST00000568890 SFNP31947 248 aa18.73■□□□□ 0.59
CNEP1R1-210ENST00000568890 JAK3P52333 1124 aa18.73■□□□□ 0.59
CNEP1R1-210ENST00000568890 NCAPH2Q6IBW4 605 aa18.73■□□□□ 0.59
CNEP1R1-210ENST00000568890 PDXDC2PQ6P474 469 aa18.73■□□□□ 0.59
CNEP1R1-210ENST00000568890 NFRKBQ6P4R8 1299 aa18.73■□□□□ 0.59
CNEP1R1-210ENST00000568890 SH3RF1Q7Z6J0 888 aa18.73■□□□□ 0.59
CNEP1R1-210ENST00000568890 BANK1Q8NDB2 785 aa18.73■□□□□ 0.59
CNEP1R1-210ENST00000568890 CEP290O15078 2479 aa18.73■□□□□ 0.59
CNEP1R1-210ENST00000568890 A0A087WWV3 80 aa18.73■□□□□ 0.59
CNEP1R1-210ENST00000568890 TMEM150BA6NC51 233 aa18.73■□□□□ 0.59
CNEP1R1-210ENST00000568890 CD4P01730 458 aa18.73■□□□□ 0.59
CNEP1R1-210ENST00000568890 SMIM10L2AP0DMW4 78 aa18.73■□□□□ 0.59
CNEP1R1-210ENST00000568890 SMIM10L2BP0DMW5 78 aa18.73■□□□□ 0.59
CNEP1R1-210ENST00000568890 HOXC8P31273 242 aa18.73■□□□□ 0.59
CNEP1R1-210ENST00000568890 ADAM17P78536 824 aa18.73■□□□□ 0.59
CNEP1R1-210ENST00000568890 MARCH8Q5T0T0 291 aa18.73■□□□□ 0.59
CNEP1R1-210ENST00000568890 IGSF22Q8N9C0 903 aa18.73■□□□□ 0.59
CNEP1R1-210ENST00000568890 AZI2Q9H6S1 392 aa18.73■□□□□ 0.59
CNEP1R1-210ENST00000568890 GTF2IRD1Q9UHL9 959 aa18.73■□□□□ 0.59
CNEP1R1-210ENST00000568890 LAMA3Q16787 3333 aa18.72■□□□□ 0.59
CNEP1R1-210ENST00000568890 PP2D1A8MPX8 630 aa18.72■□□□□ 0.59
CNEP1R1-210ENST00000568890 ZBTB42B2RXF5 422 aa18.72■□□□□ 0.59
CNEP1R1-210ENST00000568890 SPATA31C1P0DKV0 1188 aa18.72■□□□□ 0.59
CNEP1R1-210ENST00000568890 EPHA7Q15375 998 aa18.72■□□□□ 0.59
CNEP1R1-210ENST00000568890 FAM47CQ5HY64 1035 aa18.72■□□□□ 0.59
CNEP1R1-210ENST00000568890 SESTD1Q86VW0 696 aa18.72■□□□□ 0.59
CNEP1R1-210ENST00000568890 DPF3Q92784 378 aa18.72■□□□□ 0.59
CNEP1R1-210ENST00000568890 DYDC2Q96IM9 177 aa18.72■□□□□ 0.59
CNEP1R1-210ENST00000568890 EIF2AK1Q9BQI3 630 aaKnown RBP18.72■□□□□ 0.59
CNEP1R1-210ENST00000568890 SH2D3AQ9BRG2 576 aa18.72■□□□□ 0.59
CNEP1R1-210ENST00000568890 KATNAL1Q9BW62 490 aa18.72■□□□□ 0.59
CNEP1R1-210ENST00000568890 INSRRP14616 1297 aa18.72■□□□□ 0.59
CNEP1R1-210ENST00000568890 ITGB8P26012 769 aa18.72■□□□□ 0.59
CNEP1R1-210ENST00000568890 MARCKSP29966 332 aaPredicted RBP18.72■□□□□ 0.59
CNEP1R1-210ENST00000568890 PRPHP41219 470 aa18.72■□□□□ 0.59
CNEP1R1-210ENST00000568890 FXR2P51116 673 aaKnown RBP eCLIP18.72■□□□□ 0.59
CNEP1R1-210ENST00000568890 CYP4A11Q02928 519 aa18.72■□□□□ 0.59
CNEP1R1-210ENST00000568890 DNM1Q05193 864 aaKnown RBP18.72■□□□□ 0.59
CNEP1R1-210ENST00000568890 ECM1Q16610 540 aa18.72■□□□□ 0.59
CNEP1R1-210ENST00000568890 C7orf31Q8N865 590 aa18.72■□□□□ 0.59
CNEP1R1-210ENST00000568890 RDM1Q8NG50 284 aa18.72■□□□□ 0.59
CNEP1R1-210ENST00000568890 TRAPPC12Q8WVT3 735 aa18.72■□□□□ 0.59
CNEP1R1-210ENST00000568890 TOX2Q96NM4 488 aa18.72■□□□□ 0.59
CNEP1R1-210ENST00000568890 ZNF215Q9UL58 517 aaPredicted RBP18.72■□□□□ 0.59
CNEP1R1-210ENST00000568890 IGSF9BQ9UPX0 1349 aa18.71■□□□□ 0.59
CNEP1R1-210ENST00000568890 POTEB3A0JP26 581 aa18.71■□□□□ 0.59
CNEP1R1-210ENST00000568890 TRIM43BA6NCK2 446 aa18.71■□□□□ 0.59
CNEP1R1-210ENST00000568890 CTTNQ14247 550 aaKnown RBP18.71■□□□□ 0.59
CNEP1R1-210ENST00000568890 POTEBQ6S5H4 581 aa18.71■□□□□ 0.59
CNEP1R1-210ENST00000568890 WNT8BQ93098 351 aa18.71■□□□□ 0.59
CNEP1R1-210ENST00000568890 TRIM43Q96BQ3 446 aaPredicted RBP18.71■□□□□ 0.59
CNEP1R1-210ENST00000568890 LAD1O00515 517 aa18.7■□□□□ 0.58
CNEP1R1-210ENST00000568890 TREHO43280 583 aa18.7■□□□□ 0.58
CNEP1R1-210ENST00000568890 CYP2C9P11712 490 aa18.7■□□□□ 0.58
CNEP1R1-210ENST00000568890 LMBR1Q8WVP7 490 aa18.7■□□□□ 0.58
CNEP1R1-210ENST00000568890 MMTAG2Q9BU76 263 aaKnown RBP18.7■□□□□ 0.58
CNEP1R1-210ENST00000568890 HTATIP2Q9BUP3 242 aa18.7■□□□□ 0.58
CNEP1R1-210ENST00000568890 TCEAL9Q9UHQ7 104 aa18.7■□□□□ 0.58
CNEP1R1-210ENST00000568890 VWA3AA6NCI4 1184 aa18.7■□□□□ 0.58
CNEP1R1-210ENST00000568890 MED24O75448 989 aa18.7■□□□□ 0.58
CNEP1R1-210ENST00000568890 P4HBP07237 508 aaKnown RBP18.7■□□□□ 0.58
CNEP1R1-210ENST00000568890 NASPP49321 788 aaPredicted RBP18.7■□□□□ 0.58
CNEP1R1-210ENST00000568890 PDIA5Q14554 519 aa18.7■□□□□ 0.58
CNEP1R1-210ENST00000568890 SLC39A14Q15043 492 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms