RNA–Protein interactions for RNA: ENST00000568691.5

VPS9D1-207, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-207ENST00000568691 B4DLN1 442 aa13.79□□□□□ -0.2
VPS9D1-207ENST00000568691 EIF3JO75822 258 aaKnown RBP13.79□□□□□ -0.2
VPS9D1-207ENST00000568691 GGPS1O95749 300 aa13.79□□□□□ -0.2
VPS9D1-207ENST00000568691 NR3C2P08235 984 aa13.79□□□□□ -0.2
VPS9D1-207ENST00000568691 GHRP10912 638 aa13.79□□□□□ -0.2
VPS9D1-207ENST00000568691 TOP1P11387 765 aaKnown RBP13.79□□□□□ -0.2
VPS9D1-207ENST00000568691 MRPL12P52815 198 aaKnown RBP13.79□□□□□ -0.2
VPS9D1-207ENST00000568691 MCMDC2Q4G0Z9 681 aa13.79□□□□□ -0.2
VPS9D1-207ENST00000568691 PPP4R3BQ5MIZ7 849 aa13.79□□□□□ -0.2
VPS9D1-207ENST00000568691 CWF19L1Q69YN2 538 aaKnown RBP13.79□□□□□ -0.2
VPS9D1-207ENST00000568691 HSCBQ8IWL3 235 aa13.79□□□□□ -0.2
VPS9D1-207ENST00000568691 IL31RAQ8NI17 732 aa13.79□□□□□ -0.2
VPS9D1-207ENST00000568691 KCNB2Q92953 911 aa13.79□□□□□ -0.2
VPS9D1-207ENST00000568691 FAM227BQ96M60 508 aa13.79□□□□□ -0.2
VPS9D1-207ENST00000568691 SPATA33Q96N06 139 aa13.79□□□□□ -0.2
VPS9D1-207ENST00000568691 UBA5Q9GZZ9 404 aa13.79□□□□□ -0.2
VPS9D1-207ENST00000568691 NAPBQ9H115 298 aa13.79□□□□□ -0.2
VPS9D1-207ENST00000568691 SPTBN2O15020 2390 aa13.79□□□□□ -0.2
VPS9D1-207ENST00000568691 OTOGLQ3ZCN5 2332 aa13.78□□□□□ -0.2
VPS9D1-207ENST00000568691 H3BRB1 525 aa13.78□□□□□ -0.2
VPS9D1-207ENST00000568691 PI15O43692 258 aa13.78□□□□□ -0.2
VPS9D1-207ENST00000568691 ORC4O43929 436 aa13.78□□□□□ -0.2
VPS9D1-207ENST00000568691 RANBP6O60518 1105 aaKnown RBP13.78□□□□□ -0.2
VPS9D1-207ENST00000568691 LGALS2P05162 132 aa13.78□□□□□ -0.2
VPS9D1-207ENST00000568691 GOLGA8HP0CJ92 632 aa13.78□□□□□ -0.2
VPS9D1-207ENST00000568691 UBA1P22314 1058 aaKnown RBP13.78□□□□□ -0.2
VPS9D1-207ENST00000568691 GATMP50440 423 aa13.78□□□□□ -0.2
VPS9D1-207ENST00000568691 ASTLQ6HA08 431 aaPredicted RBP13.78□□□□□ -0.2
VPS9D1-207ENST00000568691 RUFY4Q6ZNE9 571 aa13.78□□□□□ -0.2
VPS9D1-207ENST00000568691 ZFP91Q96JP5 570 aaPredicted RBP13.78□□□□□ -0.2
VPS9D1-207ENST00000568691 TUT1Q9H6E5 874 aaKnown RBP13.78□□□□□ -0.2
VPS9D1-207ENST00000568691 PXMP2Q9NR77 195 aa13.78□□□□□ -0.2
VPS9D1-207ENST00000568691 ANAPC4Q9UJX5 808 aa13.78□□□□□ -0.2
VPS9D1-207ENST00000568691 MYH7BA7E2Y1 1941 aa13.78□□□□□ -0.2
VPS9D1-207ENST00000568691 SLC3A2P08195 630 aaKnown RBP13.77□□□□□ -0.21
VPS9D1-207ENST00000568691 ERVFC1P60507 584 aa13.77□□□□□ -0.21
VPS9D1-207ENST00000568691 DUSP6Q16828 381 aa13.77□□□□□ -0.21
VPS9D1-207ENST00000568691 NAALADL2Q58DX5 795 aa13.77□□□□□ -0.21
VPS9D1-207ENST00000568691 VPS53Q5VIR6 699 aa13.77□□□□□ -0.21
VPS9D1-207ENST00000568691 RNF20Q5VTR2 975 aa13.77□□□□□ -0.21
VPS9D1-207ENST00000568691 GPR179Q6PRD1 2367 aa13.77□□□□□ -0.21
VPS9D1-207ENST00000568691 DGLUCYQ7Z3D6 616 aa13.77□□□□□ -0.21
VPS9D1-207ENST00000568691 TRIM50Q86XT4 487 aa13.77□□□□□ -0.21
VPS9D1-207ENST00000568691 MAP4K1Q92918 833 aa13.77□□□□□ -0.21
VPS9D1-207ENST00000568691 DSCC1Q9BVC3 393 aa13.77□□□□□ -0.21
VPS9D1-207ENST00000568691 APOL5Q9BWW9 433 aa13.77□□□□□ -0.21
VPS9D1-207ENST00000568691 NACAP1Q9BZK3 213 aa13.77□□□□□ -0.21
VPS9D1-207ENST00000568691 TLE6Q9H808 572 aa13.77□□□□□ -0.21
VPS9D1-207ENST00000568691 AGO3Q9H9G7 860 aaKnown RBP13.77□□□□□ -0.21
VPS9D1-207ENST00000568691 PLXNA4Q9HCM2 1894 aa13.77□□□□□ -0.21
VPS9D1-207ENST00000568691 PNMA2Q9UL42 364 aa13.77□□□□□ -0.21
VPS9D1-207ENST00000568691 MYO10Q9HD67 2058 aa13.76□□□□□ -0.21
VPS9D1-207ENST00000568691 ZMYM6O95789 1325 aa13.76□□□□□ -0.21
VPS9D1-207ENST00000568691 C2CD4DB7Z1M9 353 aa13.76□□□□□ -0.21
VPS9D1-207ENST00000568691 NPR3P17342 541 aa13.76□□□□□ -0.21
VPS9D1-207ENST00000568691 MCM2P49736 904 aa13.76□□□□□ -0.21
VPS9D1-207ENST00000568691 CDC37Q16543 378 aaPredicted RBP13.76□□□□□ -0.21
VPS9D1-207ENST00000568691 ARHGEF16Q5VV41 709 aa13.76□□□□□ -0.21
VPS9D1-207ENST00000568691 TMEM184AQ6ZMB5 413 aa13.76□□□□□ -0.21
VPS9D1-207ENST00000568691 CMTR2Q8IYT2 770 aaKnown RBP13.76□□□□□ -0.21
VPS9D1-207ENST00000568691 LMBR1Q8WVP7 490 aa13.76□□□□□ -0.21
VPS9D1-207ENST00000568691 PDCD2LQ9BRP1 358 aa13.76□□□□□ -0.21
VPS9D1-207ENST00000568691 TCP11L1Q9NUJ3 509 aa13.76□□□□□ -0.21
VPS9D1-207ENST00000568691 HCSTQ9UBK5 93 aa13.76□□□□□ -0.21
VPS9D1-207ENST00000568691 ABCB11O95342 1321 aa13.75□□□□□ -0.21
VPS9D1-207ENST00000568691 FSCN2O14926 492 aa13.75□□□□□ -0.21
VPS9D1-207ENST00000568691 ASGR2P07307 311 aa13.75□□□□□ -0.21
VPS9D1-207ENST00000568691 GHRHRQ02643 423 aa13.75□□□□□ -0.21
VPS9D1-207ENST00000568691 PAN2Q504Q3 1202 aaKnown RBP13.75□□□□□ -0.21
VPS9D1-207ENST00000568691 FBXO47Q5MNV8 452 aa13.75□□□□□ -0.21
VPS9D1-207ENST00000568691 MCTP2Q6DN12 878 aa13.75□□□□□ -0.21
VPS9D1-207ENST00000568691 ANKRD54Q6NXT1 300 aa13.75□□□□□ -0.21
VPS9D1-207ENST00000568691 ZNF589Q86UQ0 364 aaPredicted RBP13.75□□□□□ -0.21
VPS9D1-207ENST00000568691 FEZF2Q8TBJ5 459 aa13.75□□□□□ -0.21
VPS9D1-207ENST00000568691 PPP2R3CQ969Q6 453 aa13.75□□□□□ -0.21
VPS9D1-207ENST00000568691 TM6SF1Q9BZW5 370 aa13.75□□□□□ -0.21
VPS9D1-207ENST00000568691 MAF1Q9H063 256 aa13.75□□□□□ -0.21
VPS9D1-207ENST00000568691 DLL3Q9NYJ7 618 aa13.75□□□□□ -0.21
VPS9D1-207ENST00000568691 SORCS3Q9UPU3 1222 aa13.75□□□□□ -0.21
VPS9D1-207ENST00000568691 U3KPZ7 1027 aaPredicted RBP13.75□□□□□ -0.21
VPS9D1-207ENST00000568691 BAHCC1Q9P281 2608 aa13.75□□□□□ -0.21
VPS9D1-207ENST00000568691 PPFIA3O75145 1194 aa13.74□□□□□ -0.21
VPS9D1-207ENST00000568691 HSD17B4P51659 736 aa13.74□□□□□ -0.21
VPS9D1-207ENST00000568691 CLCN5P51795 746 aa13.74□□□□□ -0.21
VPS9D1-207ENST00000568691 SEMA3FQ13275 785 aa13.74□□□□□ -0.21
VPS9D1-207ENST00000568691 MTMR3Q13615 1198 aa13.74□□□□□ -0.21
VPS9D1-207ENST00000568691 NECTIN1Q15223 517 aa13.74□□□□□ -0.21
VPS9D1-207ENST00000568691 TSGA10IPQ3SY00 556 aa13.74□□□□□ -0.21
VPS9D1-207ENST00000568691 ZBTB33Q86T24 672 aa13.74□□□□□ -0.21
VPS9D1-207ENST00000568691 VSIG10LQ86VR7 867 aa13.74□□□□□ -0.21
VPS9D1-207ENST00000568691 UBALD2Q8IYN6 164 aa13.74□□□□□ -0.21
VPS9D1-207ENST00000568691 KIAA2013Q8IYS2 634 aa13.74□□□□□ -0.21
VPS9D1-207ENST00000568691 NEK1Q96PY6 1258 aa13.74□□□□□ -0.21
VPS9D1-207ENST00000568691 POMKQ9H5K3 350 aa13.74□□□□□ -0.21
VPS9D1-207ENST00000568691 RBM8AQ9Y5S9 174 aaKnown RBP13.74□□□□□ -0.21
VPS9D1-207ENST00000568691 MAP1BP46821 2468 aaKnown RBP13.74□□□□□ -0.21
VPS9D1-207ENST00000568691 USP24Q9UPU5 2620 aa13.74□□□□□ -0.21
VPS9D1-207ENST00000568691 K7ELQ4 463 aaPredicted RBP13.73□□□□□ -0.21
VPS9D1-207ENST00000568691 PTH1RQ03431 593 aa13.73□□□□□ -0.21
VPS9D1-207ENST00000568691 KRT32Q14532 448 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms