RNA–Protein interactions for RNA: ENST00000568591.5

PKD1-235, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-235ENST00000568591 SHMT1P34896 483 aa20.11■□□□□ 0.81
PKD1-235ENST00000568591 SCNN1DP51172 638 aa20.11■□□□□ 0.81
PKD1-235ENST00000568591 ERVK-9P63128 1117 aa20.11■□□□□ 0.81
PKD1-235ENST00000568591 SKOR1P84550 965 aa20.11■□□□□ 0.81
PKD1-235ENST00000568591 PAK2Q13177 524 aa20.11■□□□□ 0.81
PKD1-235ENST00000568591 PABPC4Q13310 644 aaKnown RBP eCLIP20.11■□□□□ 0.81
PKD1-235ENST00000568591 TRAPPC3LQ5T215 181 aa20.11■□□□□ 0.81
PKD1-235ENST00000568591 HDAC9Q9UKV0 1011 aa20.11■□□□□ 0.81
PKD1-235ENST00000568591 ZBTB5O15062 677 aa20.1■□□□□ 0.81
PKD1-235ENST00000568591 CDC37Q16543 378 aaPredicted RBP20.1■□□□□ 0.81
PKD1-235ENST00000568591 SLC30A10Q6XR72 485 aa20.1■□□□□ 0.81
PKD1-235ENST00000568591 GBP6Q6ZN66 633 aa20.1■□□□□ 0.81
PKD1-235ENST00000568591 PLCD3Q8N3E9 789 aa20.1■□□□□ 0.81
PKD1-235ENST00000568591 CERS5Q8N5B7 392 aa20.1■□□□□ 0.81
PKD1-235ENST00000568591 ATF5Q9Y2D1 282 aaPredicted RBP20.1■□□□□ 0.81
PKD1-235ENST00000568591 PLIN4Q96Q06 1357 aa20.1■□□□□ 0.81
PKD1-235ENST00000568591 RSPH10B2B2RC85 870 aa20.1■□□□□ 0.81
PKD1-235ENST00000568591 NDUFAB1O14561 156 aa20.1■□□□□ 0.81
PKD1-235ENST00000568591 RSPH10BP0C881 870 aa20.1■□□□□ 0.81
PKD1-235ENST00000568591 ECHS1P30084 290 aa20.1■□□□□ 0.81
PKD1-235ENST00000568591 MRPL12P52815 198 aaKnown RBP20.1■□□□□ 0.81
PKD1-235ENST00000568591 SEC24CP53992 1094 aa20.1■□□□□ 0.81
PKD1-235ENST00000568591 SLC12A3P55017 1021 aa20.1■□□□□ 0.81
PKD1-235ENST00000568591 MARSP56192 900 aaKnown RBP20.1■□□□□ 0.81
PKD1-235ENST00000568591 KCNA1Q09470 495 aa20.1■□□□□ 0.81
PKD1-235ENST00000568591 DCAF17Q5H9S7 520 aaPredicted RBP20.1■□□□□ 0.81
PKD1-235ENST00000568591 HYIQ5T013 277 aa20.1■□□□□ 0.81
PKD1-235ENST00000568591 NEUROG2Q9H2A3 272 aa20.1■□□□□ 0.81
PKD1-235ENST00000568591 SHTN1A0MZ66 631 aa20.09■□□□□ 0.81
PKD1-235ENST00000568591 MYBP10242 640 aa20.09■□□□□ 0.81
PKD1-235ENST00000568591 UCHL3P15374 230 aa20.09■□□□□ 0.81
PKD1-235ENST00000568591 POLD1P28340 1107 aa20.09■□□□□ 0.81
PKD1-235ENST00000568591 CASP4P49662 377 aa20.09■□□□□ 0.81
PKD1-235ENST00000568591 CATSPER3Q86XQ3 398 aa20.09■□□□□ 0.81
PKD1-235ENST00000568591 ZFPM1Q8IX07 1006 aa20.09■□□□□ 0.81
PKD1-235ENST00000568591 C8orf37Q96NL8 207 aa20.09■□□□□ 0.81
PKD1-235ENST00000568591 NT5C3AQ9H0P0 336 aa20.09■□□□□ 0.81
PKD1-235ENST00000568591 NUCKS1Q9H1E3 243 aaKnown RBP20.09■□□□□ 0.81
PKD1-235ENST00000568591 SERPINB13Q9UIV8 391 aa20.09■□□□□ 0.81
PKD1-235ENST00000568591 A0A087WUV0 522 aaPredicted RBP20.09■□□□□ 0.81
PKD1-235ENST00000568591 QRICH1Q2TAL8 776 aa20.09■□□□□ 0.81
PKD1-235ENST00000568591 ZNF831Q5JPB2 1677 aa20.09■□□□□ 0.81
PKD1-235ENST00000568591 SFR1Q86XK3 245 aa20.09■□□□□ 0.81
PKD1-235ENST00000568591 TEX2Q8IWB9 1127 aa20.09■□□□□ 0.81
PKD1-235ENST00000568591 ARFGEF1Q9Y6D6 1849 aa20.09■□□□□ 0.81
PKD1-235ENST00000568591 CEP104O60308 925 aa20.08■□□□□ 0.81
PKD1-235ENST00000568591 ATP2B4P23634 1241 aa20.08■□□□□ 0.81
PKD1-235ENST00000568591 NFIAQ12857 509 aa20.08■□□□□ 0.81
PKD1-235ENST00000568591 HLTFQ14527 1009 aaKnown RBP eCLIP20.08■□□□□ 0.811e-7■■■■■ 28.1
PKD1-235ENST00000568591 FBXW10Q5XX13 1052 aa20.08■□□□□ 0.81
PKD1-235ENST00000568591 DDX47Q9H0S4 455 aaKnown RBP20.08■□□□□ 0.81
PKD1-235ENST00000568591 DHX36Q9H2U1 1008 aaKnown RBP20.08■□□□□ 0.81
PKD1-235ENST00000568591 CENPHQ9H3R5 247 aa20.08■□□□□ 0.81
PKD1-235ENST00000568591 KCNMB3Q9NPA1 279 aa20.08■□□□□ 0.81
PKD1-235ENST00000568591 RNF14Q9UBS8 474 aa20.08■□□□□ 0.81
PKD1-235ENST00000568591 PLAAQ9Y263 795 aa20.08■□□□□ 0.81
PKD1-235ENST00000568591 CETN3O15182 167 aa20.08■□□□□ 0.8
PKD1-235ENST00000568591 AKAP3O75969 853 aa20.08■□□□□ 0.8
PKD1-235ENST00000568591 ITGA4P13612 1032 aa20.08■□□□□ 0.8
PKD1-235ENST00000568591 FLT3P36888 993 aa20.08■□□□□ 0.8
PKD1-235ENST00000568591 SEPT2Q15019 361 aa20.08■□□□□ 0.8
PKD1-235ENST00000568591 RPS6KA1Q15418 735 aa20.08■□□□□ 0.8
PKD1-235ENST00000568591 PRR16Q569H4 304 aa20.08■□□□□ 0.8
PKD1-235ENST00000568591 CEP85LQ5SZL2 805 aa20.08■□□□□ 0.8
PKD1-235ENST00000568591 FOXR2Q6PJQ5 311 aa20.08■□□□□ 0.8
PKD1-235ENST00000568591 MAATS1Q7Z4T9 603 aa20.08■□□□□ 0.8
PKD1-235ENST00000568591 SPAG5Q96R06 1193 aa20.08■□□□□ 0.8
PKD1-235ENST00000568591 REEP2Q9BRK0 252 aa20.08■□□□□ 0.8
PKD1-235ENST00000568591 TMEM59LQ9UK28 342 aa20.08■□□□□ 0.8
PKD1-235ENST00000568591 KDM3AQ9Y4C1 1321 aa20.07■□□□□ 0.8
PKD1-235ENST00000568591 KIF4AO95239 1232 aa20.07■□□□□ 0.8
PKD1-235ENST00000568591 PON1P27169 355 aa20.07■□□□□ 0.8
PKD1-235ENST00000568591 HPDP32754 393 aaPredicted RBP20.07■□□□□ 0.8
PKD1-235ENST00000568591 LSP1P33241 339 aa20.07■□□□□ 0.8
PKD1-235ENST00000568591 CACNB3P54284 484 aa20.07■□□□□ 0.8
PKD1-235ENST00000568591 CYP4A11Q02928 519 aa20.07■□□□□ 0.8
PKD1-235ENST00000568591 GIT2Q14161 759 aa20.07■□□□□ 0.8
PKD1-235ENST00000568591 CERS3Q8IU89 383 aa20.07■□□□□ 0.8
PKD1-235ENST00000568591 ANO3Q9BYT9 981 aa20.07■□□□□ 0.8
PKD1-235ENST00000568591 NAGPAQ9UK23 515 aa20.07■□□□□ 0.8
PKD1-235ENST00000568591 PCDHA1Q9Y5I3 950 aa20.07■□□□□ 0.8
PKD1-235ENST00000568591 CLIC2O15247 247 aa20.07■□□□□ 0.8
PKD1-235ENST00000568591 GNA14O95837 355 aa20.07■□□□□ 0.8
PKD1-235ENST00000568591 NR1D1P20393 614 aa20.07■□□□□ 0.8
PKD1-235ENST00000568591 SPIRE1Q08AE8 756 aa20.07■□□□□ 0.8
PKD1-235ENST00000568591 TCERG1LQ5VWI1 586 aa20.07■□□□□ 0.8
PKD1-235ENST00000568591 PPP1R18Q6NYC8 613 aa20.07■□□□□ 0.8
PKD1-235ENST00000568591 ZC3H3Q8IXZ2 948 aaKnown RBP20.07■□□□□ 0.8
PKD1-235ENST00000568591 LRRC57Q8N9N7 239 aa20.07■□□□□ 0.8
PKD1-235ENST00000568591 LRRC4CQ9HCJ2 640 aa20.07■□□□□ 0.8
PKD1-235ENST00000568591 LUC7LQ9NQ29 371 aaKnown RBP20.07■□□□□ 0.8
PKD1-235ENST00000568591 PCDHAC2Q9Y5I4 1007 aa20.07■□□□□ 0.8
PKD1-235ENST00000568591 BTAF1O14981 1849 aa20.06■□□□□ 0.8
PKD1-235ENST00000568591 FRMD3A2A2Y4 597 aa20.06■□□□□ 0.8
PKD1-235ENST00000568591 SFI1A8K8P3 1242 aa20.06■□□□□ 0.8
PKD1-235ENST00000568591 ERLIN2O94905 339 aa20.06■□□□□ 0.8
PKD1-235ENST00000568591 UAP1Q16222 522 aaPredicted RBP20.06■□□□□ 0.8
PKD1-235ENST00000568591 KDM7AQ6ZMT4 941 aa20.06■□□□□ 0.8
PKD1-235ENST00000568591 METTL13Q8N6R0 699 aa20.06■□□□□ 0.8
PKD1-235ENST00000568591 FAM107BQ9H098 131 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms