RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 TJAP1Q5JTD0 557 aa5.36□□□□□ -1.55
HERPUD1-213ENST00000568358 EGFLAMQ63HQ2 1017 aa5.36□□□□□ -1.55
HERPUD1-213ENST00000568358 GDF6Q6KF10 455 aaPredicted RBP5.36□□□□□ -1.55
HERPUD1-213ENST00000568358 XRRA1Q6P2D8 792 aa5.36□□□□□ -1.55
HERPUD1-213ENST00000568358 CNKSR3Q6P9H4 555 aa5.36□□□□□ -1.55
HERPUD1-213ENST00000568358 LRRC8DQ7L1W4 858 aa5.36□□□□□ -1.55
HERPUD1-213ENST00000568358 NLRX1Q86UT6 975 aa5.36□□□□□ -1.55
HERPUD1-213ENST00000568358 ZNF654Q8IZM8 581 aa5.36□□□□□ -1.55
HERPUD1-213ENST00000568358 MICALL1Q8N3F8 863 aa5.36□□□□□ -1.55
HERPUD1-213ENST00000568358 IGDCC4Q8TDY8 1250 aa5.36□□□□□ -1.55
HERPUD1-213ENST00000568358 ATXN2LQ8WWM7 1075 aaKnown RBP5.36□□□□□ -1.55
HERPUD1-213ENST00000568358 PIK3R5Q8WYR1 880 aa5.36□□□□□ -1.55
HERPUD1-213ENST00000568358 ZNF592Q92610 1267 aa5.36□□□□□ -1.55
HERPUD1-213ENST00000568358 TNPO1Q92973 898 aaKnown RBP5.36□□□□□ -1.55
HERPUD1-213ENST00000568358 ATP6V0A1Q93050 837 aa5.36□□□□□ -1.55
HERPUD1-213ENST00000568358 MTMR8Q96EF0 704 aa5.36□□□□□ -1.55
HERPUD1-213ENST00000568358 CDHR1Q96JP9 859 aa5.36□□□□□ -1.55
HERPUD1-213ENST00000568358 USP26Q9BXU7 913 aa5.36□□□□□ -1.55
HERPUD1-213ENST00000568358 PSTPIP2Q9H939 334 aa5.36□□□□□ -1.55
HERPUD1-213ENST00000568358 EHMT1Q9H9B1 1298 aa5.36□□□□□ -1.55
HERPUD1-213ENST00000568358 RTEL1Q9NZ71 1219 aa5.36□□□□□ -1.55
HERPUD1-213ENST00000568358 GTF2IRD1Q9UHL9 959 aa5.36□□□□□ -1.55
HERPUD1-213ENST00000568358 ZNF215Q9UL58 517 aaPredicted RBP5.36□□□□□ -1.55
HERPUD1-213ENST00000568358 RBM8AQ9Y5S9 174 aaKnown RBP5.36□□□□□ -1.55
HERPUD1-213ENST00000568358 EMSYQ7Z589 1322 aa5.36□□□□□ -1.55
HERPUD1-213ENST00000568358 DOCK5Q9H7D0 1870 aa5.36□□□□□ -1.55
HERPUD1-213ENST00000568358 TCF20Q9UGU0 1960 aaKnown RBP5.36□□□□□ -1.55
HERPUD1-213ENST00000568358 MYH9P35579 1960 aaKnown RBP5.35□□□□□ -1.55
HERPUD1-213ENST00000568358 TLDC2A0PJX2 215 aa5.35□□□□□ -1.55
HERPUD1-213ENST00000568358 SPDYE3A6NKU9 549 aa5.35□□□□□ -1.55
HERPUD1-213ENST00000568358 GOLGA8CPA6NN73 597 aa5.35□□□□□ -1.55
HERPUD1-213ENST00000568358 RSPH10B2B2RC85 870 aa5.35□□□□□ -1.55
HERPUD1-213ENST00000568358 H3BRB1 525 aa5.35□□□□□ -1.55
HERPUD1-213ENST00000568358 MAFGO15525 162 aa5.35□□□□□ -1.55
HERPUD1-213ENST00000568358 MAP3K7O43318 606 aa5.35□□□□□ -1.55
HERPUD1-213ENST00000568358 FIBPO43427 364 aa5.35□□□□□ -1.55
HERPUD1-213ENST00000568358 PPP1R11O60927 126 aaPredicted RBP5.35□□□□□ -1.55
HERPUD1-213ENST00000568358 CA3P07451 260 aa5.35□□□□□ -1.55
HERPUD1-213ENST00000568358 RSPH10BP0C881 870 aa5.35□□□□□ -1.55
HERPUD1-213ENST00000568358 ZNF286BP0CG31 522 aa5.35□□□□□ -1.55
HERPUD1-213ENST00000568358 MYOGP15173 224 aa5.35□□□□□ -1.55
HERPUD1-213ENST00000568358 THPOP40225 353 aa5.35□□□□□ -1.55
HERPUD1-213ENST00000568358 LIFRP42702 1097 aa5.35□□□□□ -1.55
HERPUD1-213ENST00000568358 FGD1P98174 961 aa5.35□□□□□ -1.55
HERPUD1-213ENST00000568358 GHRHRQ02643 423 aa5.35□□□□□ -1.55
HERPUD1-213ENST00000568358 ECM1Q16610 540 aa5.35□□□□□ -1.55
HERPUD1-213ENST00000568358 PADI6Q6TGC4 694 aa5.35□□□□□ -1.55
HERPUD1-213ENST00000568358 METTL7BQ6UX53 244 aa5.35□□□□□ -1.55
HERPUD1-213ENST00000568358 CYFIP1Q7L576 1253 aa5.35□□□□□ -1.55
HERPUD1-213ENST00000568358 RSPH3Q86UC2 560 aa5.35□□□□□ -1.55
HERPUD1-213ENST00000568358 HERC6Q8IVU3 1022 aa5.35□□□□□ -1.55
HERPUD1-213ENST00000568358 MB21D2Q8IYB1 491 aaPredicted RBP5.35□□□□□ -1.55
HERPUD1-213ENST00000568358 PPP1R13LQ8WUF5 828 aa5.35□□□□□ -1.55
HERPUD1-213ENST00000568358 ARNTL2Q8WYA1 636 aa5.35□□□□□ -1.55
HERPUD1-213ENST00000568358 KAT2BQ92831 832 aa5.35□□□□□ -1.55
HERPUD1-213ENST00000568358 ZDHHC16Q969W1 377 aa5.35□□□□□ -1.55
HERPUD1-213ENST00000568358 ASB16Q96NS5 453 aa5.35□□□□□ -1.55
HERPUD1-213ENST00000568358 SPZ1Q9BXG8 430 aa5.35□□□□□ -1.55
HERPUD1-213ENST00000568358 BRINP2Q9C0B6 783 aa5.35□□□□□ -1.55
HERPUD1-213ENST00000568358 IL25Q9H293 177 aa5.35□□□□□ -1.55
HERPUD1-213ENST00000568358 TUT1Q9H6E5 874 aaKnown RBP5.35□□□□□ -1.55
HERPUD1-213ENST00000568358 LY9Q9HBG7 655 aa5.35□□□□□ -1.55
HERPUD1-213ENST00000568358 ANO2Q9NQ90 1003 aa5.35□□□□□ -1.55
HERPUD1-213ENST00000568358 THEGQ9P2T0 379 aa5.35□□□□□ -1.55
HERPUD1-213ENST00000568358 YBX2Q9Y2T7 364 aaKnown RBP5.35□□□□□ -1.55
HERPUD1-213ENST00000568358 TANC1Q9C0D5 1861 aa5.34□□□□□ -1.55
HERPUD1-213ENST00000568358 PRRC2BQ5JSZ5 2229 aaKnown RBP5.34□□□□□ -1.55
HERPUD1-213ENST00000568358 SPATA31C2B4DYI2 1134 aa5.34□□□□□ -1.55
HERPUD1-213ENST00000568358 HAS3O00219 553 aa5.34□□□□□ -1.55
HERPUD1-213ENST00000568358 TNFRSF10AO00220 468 aa5.34□□□□□ -1.55
HERPUD1-213ENST00000568358 PIK3CDO00329 1044 aa5.34□□□□□ -1.55
HERPUD1-213ENST00000568358 SCAMP3O14828 347 aaKnown RBP5.34□□□□□ -1.55
HERPUD1-213ENST00000568358 OPLAHO14841 1288 aa5.34□□□□□ -1.55
HERPUD1-213ENST00000568358 SLC27A2O14975 620 aa5.34□□□□□ -1.55
HERPUD1-213ENST00000568358 CYTH3O43739 400 aa5.34□□□□□ -1.55
HERPUD1-213ENST00000568358 CAND2O75155 1236 aa5.34□□□□□ -1.55
HERPUD1-213ENST00000568358 LGR5O75473 907 aa5.34□□□□□ -1.55
HERPUD1-213ENST00000568358 RGS20O76081 388 aa5.34□□□□□ -1.55
HERPUD1-213ENST00000568358 F2P00734 622 aa5.34□□□□□ -1.55
HERPUD1-213ENST00000568358 AMHP03971 560 aa5.34□□□□□ -1.55
HERPUD1-213ENST00000568358 NDUFV2P19404 249 aa5.34□□□□□ -1.55
HERPUD1-213ENST00000568358 UBA1P22314 1058 aaKnown RBP5.34□□□□□ -1.55
HERPUD1-213ENST00000568358 ERCC5P28715 1186 aaPredicted RBP5.34□□□□□ -1.55
HERPUD1-213ENST00000568358 ICAM3P32942 547 aa5.34□□□□□ -1.55
HERPUD1-213ENST00000568358 SP2Q02086 613 aa5.34□□□□□ -1.55
HERPUD1-213ENST00000568358 SP4Q02446 784 aa5.34□□□□□ -1.55
HERPUD1-213ENST00000568358 KRT32Q14532 448 aa5.34□□□□□ -1.55
HERPUD1-213ENST00000568358 HSDL1Q3SXM5 330 aa5.34□□□□□ -1.55
HERPUD1-213ENST00000568358 ZNF618Q5T7W0 954 aa5.34□□□□□ -1.55
HERPUD1-213ENST00000568358 UTP14CQ5TAP6 766 aaKnown RBP5.34□□□□□ -1.55
HERPUD1-213ENST00000568358 PCNX4Q63HM2 1172 aa5.34□□□□□ -1.55
HERPUD1-213ENST00000568358 CREB3L3Q68CJ9 461 aa5.34□□□□□ -1.55
HERPUD1-213ENST00000568358 USP17L6PQ6QN14 398 aa5.34□□□□□ -1.55
HERPUD1-213ENST00000568358 RNF135Q8IUD6 432 aa5.34□□□□□ -1.55
HERPUD1-213ENST00000568358 FANCBQ8NB91 859 aa5.34□□□□□ -1.55
HERPUD1-213ENST00000568358 SEPT8Q92599 483 aa5.34□□□□□ -1.55
HERPUD1-213ENST00000568358 NEK1Q96PY6 1258 aa5.34□□□□□ -1.55
HERPUD1-213ENST00000568358 ASB2Q96Q27 587 aa5.34□□□□□ -1.55
HERPUD1-213ENST00000568358 RAD9AQ99638 391 aa5.34□□□□□ -1.55
HERPUD1-213ENST00000568358 SENP7Q9BQF6 1050 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms