RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 LLPHQ9BRT6 129 aaKnown RBP9.3□□□□□ -0.92
HDGFL3-205ENST00000568129 SETD4Q9NVD3 440 aa9.3□□□□□ -0.92
HDGFL3-205ENST00000568129 ORC3Q9UBD5 711 aaPredicted RBP9.3□□□□□ -0.92
HDGFL3-205ENST00000568129 LIMCH1Q9UPQ0 1083 aa9.3□□□□□ -0.92
HDGFL3-205ENST00000568129 CHD9Q3L8U1 2897 aa9.29□□□□□ -0.92
HDGFL3-205ENST00000568129 MSH4O15457 936 aa9.29□□□□□ -0.92
HDGFL3-205ENST00000568129 PSMD10O75832 226 aa9.29□□□□□ -0.92
HDGFL3-205ENST00000568129 BAIAP3O94812 1187 aa9.29□□□□□ -0.92
HDGFL3-205ENST00000568129 RPLP2P05387 115 aaKnown RBP9.29□□□□□ -0.92
HDGFL3-205ENST00000568129 XBP1P17861 261 aa9.29□□□□□ -0.92
HDGFL3-205ENST00000568129 ATP4AP20648 1035 aa9.29□□□□□ -0.92
HDGFL3-205ENST00000568129 STAT5BP51692 787 aa9.29□□□□□ -0.92
HDGFL3-205ENST00000568129 KRT76Q01546 638 aa9.29□□□□□ -0.92
HDGFL3-205ENST00000568129 PLCB4Q15147 1175 aa9.29□□□□□ -0.92
HDGFL3-205ENST00000568129 ZNF618Q5T7W0 954 aa9.29□□□□□ -0.92
HDGFL3-205ENST00000568129 UTP14CQ5TAP6 766 aaKnown RBP9.29□□□□□ -0.92
HDGFL3-205ENST00000568129 TAF2Q6P1X5 1199 aa9.29□□□□□ -0.92
HDGFL3-205ENST00000568129 FAM43BQ6ZT52 329 aaPredicted RBP9.29□□□□□ -0.92
HDGFL3-205ENST00000568129 KRT25Q7Z3Z0 450 aa9.29□□□□□ -0.92
HDGFL3-205ENST00000568129 SMAP1Q8IYB5 467 aaPredicted RBP9.29□□□□□ -0.92
HDGFL3-205ENST00000568129 ETNPPLQ8TBG4 499 aa9.29□□□□□ -0.92
HDGFL3-205ENST00000568129 LMBR1Q8WVP7 490 aa9.29□□□□□ -0.92
HDGFL3-205ENST00000568129 TNPO1Q92973 898 aaKnown RBP9.29□□□□□ -0.92
HDGFL3-205ENST00000568129 ZSCAN31Q96LW9 406 aaPredicted RBP9.29□□□□□ -0.92
HDGFL3-205ENST00000568129 ZNF577Q9BSK1 485 aa9.29□□□□□ -0.92
HDGFL3-205ENST00000568129 SEMA6BQ9H3T3 888 aa9.29□□□□□ -0.92
HDGFL3-205ENST00000568129 SH2B1Q9NRF2 756 aaPredicted RBP9.29□□□□□ -0.92
HDGFL3-205ENST00000568129 KCNJ14Q9UNX9 436 aa9.29□□□□□ -0.92
HDGFL3-205ENST00000568129 NOD1Q9Y239 953 aa9.29□□□□□ -0.92
HDGFL3-205ENST00000568129 CHD7Q9P2D1 2997 aa9.28□□□□□ -0.92
HDGFL3-205ENST00000568129 COL1A2P08123 1366 aa9.28□□□□□ -0.92
HDGFL3-205ENST00000568129 ABHD14A-ACY1A0A1B0GW23 586 aa9.28□□□□□ -0.92
HDGFL3-205ENST00000568129 ZBTB42B2RXF5 422 aa9.28□□□□□ -0.92
HDGFL3-205ENST00000568129 HBP1O60381 514 aa9.28□□□□□ -0.92
HDGFL3-205ENST00000568129 EFCAB14O75071 495 aa9.28□□□□□ -0.92
HDGFL3-205ENST00000568129 ACTN1P12814 892 aa9.28□□□□□ -0.92
HDGFL3-205ENST00000568129 INSRRP14616 1297 aa9.28□□□□□ -0.92
HDGFL3-205ENST00000568129 MGAT3Q09327 533 aa9.28□□□□□ -0.92
HDGFL3-205ENST00000568129 NONOQ15233 471 aaKnown RBP eCLIP9.28□□□□□ -0.92
HDGFL3-205ENST00000568129 RABEP1Q15276 862 aa9.28□□□□□ -0.92
HDGFL3-205ENST00000568129 GRIK4Q16099 956 aa9.28□□□□□ -0.92
HDGFL3-205ENST00000568129 TCTN1Q2MV58 587 aa9.28□□□□□ -0.92
HDGFL3-205ENST00000568129 PRR16Q569H4 304 aa9.28□□□□□ -0.92
HDGFL3-205ENST00000568129 PLEKHG4Q58EX7 1191 aa9.28□□□□□ -0.92
HDGFL3-205ENST00000568129 CNKSR3Q6P9H4 555 aa9.28□□□□□ -0.92
HDGFL3-205ENST00000568129 OTOP2Q7RTS6 562 aa9.28□□□□□ -0.92
HDGFL3-205ENST00000568129 CCDC60Q8IWA6 550 aaPredicted RBP9.28□□□□□ -0.92
HDGFL3-205ENST00000568129 DEFB123Q8N688 67 aa9.28□□□□□ -0.92
HDGFL3-205ENST00000568129 RDM1Q8NG50 284 aa9.28□□□□□ -0.92
HDGFL3-205ENST00000568129 OXER1Q8TDS5 423 aa9.28□□□□□ -0.92
HDGFL3-205ENST00000568129 ATP8B4Q8TF62 1192 aa9.28□□□□□ -0.92
HDGFL3-205ENST00000568129 GLG1Q92896 1179 aa9.28□□□□□ -0.92
HDGFL3-205ENST00000568129 GUCD1Q96NT3 240 aa9.28□□□□□ -0.92
HDGFL3-205ENST00000568129 PBX4Q9BYU1 374 aa9.28□□□□□ -0.92
HDGFL3-205ENST00000568129 MTIF3Q9H2K0 278 aaKnown RBP9.28□□□□□ -0.92
HDGFL3-205ENST00000568129 TTYH1Q9H313 450 aaPredicted RBP9.28□□□□□ -0.92
HDGFL3-205ENST00000568129 AZI2Q9H6S1 392 aa9.28□□□□□ -0.92
HDGFL3-205ENST00000568129 KCNMB3Q9NPA1 279 aa9.28□□□□□ -0.92
HDGFL3-205ENST00000568129 GJB4Q9NTQ9 266 aa9.28□□□□□ -0.92
HDGFL3-205ENST00000568129 PKD2L1Q9P0L9 805 aa9.28□□□□□ -0.92
HDGFL3-205ENST00000568129 PCDHA2Q9Y5H9 948 aa9.28□□□□□ -0.92
HDGFL3-205ENST00000568129 PCDHA10Q9Y5I2 948 aa9.28□□□□□ -0.92
HDGFL3-205ENST00000568129 SQORQ9Y6N5 450 aa9.28□□□□□ -0.92
HDGFL3-205ENST00000568129 CDH23Q9H251 3354 aa9.28□□□□□ -0.92
HDGFL3-205ENST00000568129 KDM3AQ9Y4C1 1321 aa9.28□□□□□ -0.92
HDGFL3-205ENST00000568129 RSPH10B2B2RC85 870 aa9.27□□□□□ -0.93
HDGFL3-205ENST00000568129 TBX3O15119 743 aa9.27□□□□□ -0.93
HDGFL3-205ENST00000568129 JAK2O60674 1132 aa9.27□□□□□ -0.93
HDGFL3-205ENST00000568129 CHRNA1P02708 482 aa9.27□□□□□ -0.93
HDGFL3-205ENST00000568129 MMP1P03956 469 aa9.27□□□□□ -0.93
HDGFL3-205ENST00000568129 RSPH10BP0C881 870 aa9.27□□□□□ -0.93
HDGFL3-205ENST00000568129 GCFC2P16383 781 aaKnown RBP9.27□□□□□ -0.93
HDGFL3-205ENST00000568129 SFNP31947 248 aa9.27□□□□□ -0.93
HDGFL3-205ENST00000568129 THPOP40225 353 aa9.27□□□□□ -0.93
HDGFL3-205ENST00000568129 CHMP4BP1P59074 171 aa9.27□□□□□ -0.93
HDGFL3-205ENST00000568129 SP4Q02446 784 aa9.27□□□□□ -0.93
HDGFL3-205ENST00000568129 PPFIA1Q13136 1202 aa9.27□□□□□ -0.93
HDGFL3-205ENST00000568129 EARS2Q5JPH6 523 aaKnown RBP9.27□□□□□ -0.93
HDGFL3-205ENST00000568129 FAM160B1Q5W0V3 765 aa9.27□□□□□ -0.93
HDGFL3-205ENST00000568129 MIS18BP1Q6P0N0 1132 aa9.27□□□□□ -0.93
HDGFL3-205ENST00000568129 DEFB128Q7Z7B8 93 aa9.27□□□□□ -0.93
HDGFL3-205ENST00000568129 NEK8Q86SG6 692 aa9.27□□□□□ -0.93
HDGFL3-205ENST00000568129 NME8Q8N427 588 aa9.27□□□□□ -0.93
HDGFL3-205ENST00000568129 FAM20AQ96MK3 541 aa9.27□□□□□ -0.93
HDGFL3-205ENST00000568129 TBC1D32Q96NH3 1257 aa9.27□□□□□ -0.93
HDGFL3-205ENST00000568129 SLC9A7Q96T83 725 aa9.27□□□□□ -0.93
HDGFL3-205ENST00000568129 ZNF302Q9NR11 478 aa9.27□□□□□ -0.93
HDGFL3-205ENST00000568129 STXBP5LQ9Y2K9 1186 aa9.27□□□□□ -0.93
HDGFL3-205ENST00000568129 PCDHA11Q9Y5I1 949 aa9.27□□□□□ -0.93
HDGFL3-205ENST00000568129 SLC4A7Q9Y6M7 1214 aa9.27□□□□□ -0.93
HDGFL3-205ENST00000568129 IGSF9BQ9UPX0 1349 aa9.27□□□□□ -0.93
HDGFL3-205ENST00000568129 NLRC5Q86WI3 1866 aa9.26□□□□□ -0.93
HDGFL3-205ENST00000568129 SMIM35A0A1B0GVV1 85 aa9.26□□□□□ -0.93
HDGFL3-205ENST00000568129 POTEB3A0JP26 581 aa9.26□□□□□ -0.93
HDGFL3-205ENST00000568129 GRXCR1A8MXD5 290 aa9.26□□□□□ -0.93
HDGFL3-205ENST00000568129 WDR64B1ANS9 1081 aa9.26□□□□□ -0.93
HDGFL3-205ENST00000568129 ZNF862O60290 1169 aa9.26□□□□□ -0.93
HDGFL3-205ENST00000568129 STBD1O95210 358 aa9.26□□□□□ -0.93
HDGFL3-205ENST00000568129 TDP2O95551 362 aa9.26□□□□□ -0.93
HDGFL3-205ENST00000568129 PSAPP07602 524 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms