RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 TFF2Q03403 129 aa13.94□□□□□ -0.18
GTF3C1-208ENST00000567843 TMEM62Q0P6H9 643 aa13.94□□□□□ -0.18
GTF3C1-208ENST00000567843 TJAP1Q5JTD0 557 aa13.94□□□□□ -0.18
GTF3C1-208ENST00000567843 MARCH8Q5T0T0 291 aa13.94□□□□□ -0.18
GTF3C1-208ENST00000567843 PLA2G4DQ86XP0 818 aa13.94□□□□□ -0.18
GTF3C1-208ENST00000567843 ZNF713Q8N859 430 aaPredicted RBP13.94□□□□□ -0.18
GTF3C1-208ENST00000567843 SLC26A6Q9BXS9 759 aa13.94□□□□□ -0.18
GTF3C1-208ENST00000567843 UPF3BQ9BZI7 483 aaKnown RBP13.94□□□□□ -0.18
GTF3C1-208ENST00000567843 AZI2Q9H6S1 392 aa13.94□□□□□ -0.18
GTF3C1-208ENST00000567843 TUBE1Q9UJT0 475 aa13.94□□□□□ -0.18
GTF3C1-208ENST00000567843 PTPRSQ13332 1948 aa13.94□□□□□ -0.18
GTF3C1-208ENST00000567843 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.93□□□□□ -0.18
GTF3C1-208ENST00000567843 MEIS1O00470 390 aa13.93□□□□□ -0.18
GTF3C1-208ENST00000567843 PRPF3O43395 683 aaKnown RBP13.93□□□□□ -0.18
GTF3C1-208ENST00000567843 LPXNO60711 386 aa13.93□□□□□ -0.18
GTF3C1-208ENST00000567843 DTNBO60941 627 aa13.93□□□□□ -0.18
GTF3C1-208ENST00000567843 EFCAB14O75071 495 aa13.93□□□□□ -0.18
GTF3C1-208ENST00000567843 CCNE2O96020 404 aa13.93□□□□□ -0.18
GTF3C1-208ENST00000567843 PDIA3P30101 505 aaKnown RBP13.93□□□□□ -0.18
GTF3C1-208ENST00000567843 RCAN1P53805 252 aa13.93□□□□□ -0.18
GTF3C1-208ENST00000567843 AKAP17AQ02040 695 aaKnown RBP13.93□□□□□ -0.18
GTF3C1-208ENST00000567843 AP3B2Q13367 1082 aa13.93□□□□□ -0.18
GTF3C1-208ENST00000567843 PLCB4Q15147 1175 aa13.93□□□□□ -0.18
GTF3C1-208ENST00000567843 TRMT1LQ7Z2T5 733 aaKnown RBP13.93□□□□□ -0.18
GTF3C1-208ENST00000567843 C17orf80Q9BSJ5 609 aa13.93□□□□□ -0.18
GTF3C1-208ENST00000567843 C6orf50Q9HD87 102 aa13.93□□□□□ -0.18
GTF3C1-208ENST00000567843 VPS54Q9P1Q0 977 aa13.93□□□□□ -0.18
GTF3C1-208ENST00000567843 BACH1O14867 736 aa13.92□□□□□ -0.18
GTF3C1-208ENST00000567843 CAND2O75155 1236 aa13.92□□□□□ -0.18
GTF3C1-208ENST00000567843 STAT5BP51692 787 aa13.92□□□□□ -0.18
GTF3C1-208ENST00000567843 STK3Q13188 491 aa13.92□□□□□ -0.18
GTF3C1-208ENST00000567843 MKRN4PQ13434 485 aaPredicted RBP13.92□□□□□ -0.18
GTF3C1-208ENST00000567843 TOB2Q14106 344 aaPredicted RBP13.92□□□□□ -0.18
GTF3C1-208ENST00000567843 NTRK3Q16288 839 aa13.92□□□□□ -0.18
GTF3C1-208ENST00000567843 FAM26DQ5JW98 314 aa13.92□□□□□ -0.18
GTF3C1-208ENST00000567843 IFIH1Q9BYX4 1025 aaKnown RBP13.92□□□□□ -0.18
GTF3C1-208ENST00000567843 SUGCTQ9HAC7 445 aa13.92□□□□□ -0.18
GTF3C1-208ENST00000567843 NFASCO94856 1347 aa13.91□□□□□ -0.18
GTF3C1-208ENST00000567843 SPTBN5Q9NRC6 3674 aaKnown RBP13.91□□□□□ -0.18
GTF3C1-208ENST00000567843 IBSPP21815 317 aaPredicted RBP13.91□□□□□ -0.18
GTF3C1-208ENST00000567843 MGAT3Q09327 533 aa13.91□□□□□ -0.18
GTF3C1-208ENST00000567843 LPIN1Q14693 890 aa13.91□□□□□ -0.18
GTF3C1-208ENST00000567843 TAF2Q6P1X5 1199 aa13.91□□□□□ -0.18
GTF3C1-208ENST00000567843 RUFY3Q7L099 469 aa13.91□□□□□ -0.18
GTF3C1-208ENST00000567843 RSPH3Q86UC2 560 aa13.91□□□□□ -0.18
GTF3C1-208ENST00000567843 REXO1Q8N1G1 1221 aaKnown RBP13.91□□□□□ -0.18
GTF3C1-208ENST00000567843 ASB2Q96Q27 587 aa13.91□□□□□ -0.18
GTF3C1-208ENST00000567843 TGS1Q96RS0 853 aaKnown RBP13.91□□□□□ -0.18
GTF3C1-208ENST00000567843 YME1L1Q96TA2 773 aa13.91□□□□□ -0.18
GTF3C1-208ENST00000567843 AGXT2Q9BYV1 514 aa13.91□□□□□ -0.18
GTF3C1-208ENST00000567843 ZMYND12Q9H0C1 365 aa13.91□□□□□ -0.18
GTF3C1-208ENST00000567843 GLT8D2Q9H1C3 349 aa13.91□□□□□ -0.18
GTF3C1-208ENST00000567843 ZSWIM6Q9HCJ5 1215 aa13.91□□□□□ -0.18
GTF3C1-208ENST00000567843 INSL6Q9Y581 213 aa13.91□□□□□ -0.18
GTF3C1-208ENST00000567843 CDY2AQ9Y6F7 541 aa13.91□□□□□ -0.18
GTF3C1-208ENST00000567843 NCOR1O75376 2440 aa13.91□□□□□ -0.18
GTF3C1-208ENST00000567843 KAT6AQ92794 2004 aa13.9□□□□□ -0.18
GTF3C1-208ENST00000567843 IGLV3-22A0A075B6J6 115 aa13.9□□□□□ -0.18
GTF3C1-208ENST00000567843 POTEB3A0JP26 581 aa13.9□□□□□ -0.18
GTF3C1-208ENST00000567843 MBLAC1A4D2B0 266 aaPredicted RBP13.9□□□□□ -0.18
GTF3C1-208ENST00000567843 RRN3P2A6NIE6 340 aa13.9□□□□□ -0.18
GTF3C1-208ENST00000567843 DHX15O43143 795 aaKnown RBP13.9□□□□□ -0.18
GTF3C1-208ENST00000567843 CD52P31358 61 aa13.9□□□□□ -0.18
GTF3C1-208ENST00000567843 ERVK-21P61565 698 aa13.9□□□□□ -0.18
GTF3C1-208ENST00000567843 MRPS5P82675 430 aaKnown RBP13.9□□□□□ -0.18
GTF3C1-208ENST00000567843 PRR16Q569H4 304 aa13.9□□□□□ -0.18
GTF3C1-208ENST00000567843 FBXO47Q5MNV8 452 aa13.9□□□□□ -0.18
GTF3C1-208ENST00000567843 SWSAP1Q6NVH7 229 aa13.9□□□□□ -0.18
GTF3C1-208ENST00000567843 POTEBQ6S5H4 581 aa13.9□□□□□ -0.18
GTF3C1-208ENST00000567843 CCDC60Q8IWA6 550 aaPredicted RBP13.9□□□□□ -0.18
GTF3C1-208ENST00000567843 CCDC12Q8WUD4 166 aaPredicted RBP13.9□□□□□ -0.18
GTF3C1-208ENST00000567843 ATXN2LQ8WWM7 1075 aaKnown RBP13.9□□□□□ -0.18
GTF3C1-208ENST00000567843 SYMPKQ92797 1274 aaKnown RBP13.9□□□□□ -0.18
GTF3C1-208ENST00000567843 TOP1MTQ969P6 601 aa13.9□□□□□ -0.18
GTF3C1-208ENST00000567843 NECAB3Q96P71 396 aaPredicted RBP13.9□□□□□ -0.18
GTF3C1-208ENST00000567843 ZNF577Q9BSK1 485 aa13.9□□□□□ -0.18
GTF3C1-208ENST00000567843 TSPYL2Q9H2G4 693 aaPredicted RBP13.9□□□□□ -0.18
GTF3C1-208ENST00000567843 AGO3Q9H9G7 860 aaKnown RBP13.9□□□□□ -0.18
GTF3C1-208ENST00000567843 CYP46A1Q9Y6A2 500 aa13.9□□□□□ -0.18
GTF3C1-208ENST00000567843 BRWD1Q9NSI6 2320 aa13.89□□□□□ -0.19
GTF3C1-208ENST00000567843 ESYT2A0FGR8 921 aa13.89□□□□□ -0.19
GTF3C1-208ENST00000567843 IPO5O00410 1097 aaKnown RBP13.89□□□□□ -0.19
GTF3C1-208ENST00000567843 CYP3A4P08684 503 aa13.89□□□□□ -0.19
GTF3C1-208ENST00000567843 IFNAR1P17181 557 aa13.89□□□□□ -0.19
GTF3C1-208ENST00000567843 POU3F3P20264 500 aaPredicted RBP13.89□□□□□ -0.19
GTF3C1-208ENST00000567843 GNA11P29992 359 aa13.89□□□□□ -0.19
GTF3C1-208ENST00000567843 KCNQ1P51787 676 aa13.89□□□□□ -0.19
GTF3C1-208ENST00000567843 NLRP5P59047 1200 aa13.89□□□□□ -0.19
GTF3C1-208ENST00000567843 MRPS6P82932 125 aaKnown RBP13.89□□□□□ -0.19
GTF3C1-208ENST00000567843 HTRA4P83105 476 aaPredicted RBP13.89□□□□□ -0.19
GTF3C1-208ENST00000567843 ABHD15Q6UXT9 468 aa13.89□□□□□ -0.19
GTF3C1-208ENST00000567843 PLPPR4Q7Z2D5 763 aa13.89□□□□□ -0.19
GTF3C1-208ENST00000567843 FBXL16Q8N461 479 aa13.89□□□□□ -0.19
GTF3C1-208ENST00000567843 IL27Q8NEV9 243 aa13.89□□□□□ -0.19
GTF3C1-208ENST00000567843 FBXO22Q8NEZ5 403 aa13.89□□□□□ -0.19
GTF3C1-208ENST00000567843 CRYGNQ8WXF5 182 aa13.89□□□□□ -0.19
GTF3C1-208ENST00000567843 GJA10Q969M2 543 aa13.89□□□□□ -0.19
GTF3C1-208ENST00000567843 AIFM3Q96NN9 605 aa13.89□□□□□ -0.19
GTF3C1-208ENST00000567843 PPP1R16BQ96T49 567 aa13.89□□□□□ -0.19
GTF3C1-208ENST00000567843 RNF26Q9BY78 433 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms