RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 RASGRP4Q8TDF6 673 aa11.54□□□□□ -0.56
GTF3C1-206ENST00000566779 AFAP1L1Q8TED9 768 aa11.54□□□□□ -0.56
GTF3C1-206ENST00000566779 PPM1EQ8WY54 764 aa11.54□□□□□ -0.56
GTF3C1-206ENST00000566779 SDF4Q9BRK5 362 aa11.54□□□□□ -0.56
GTF3C1-206ENST00000566779 USP26Q9BXU7 913 aa11.54□□□□□ -0.56
GTF3C1-206ENST00000566779 ZNF576Q9H609 170 aa11.54□□□□□ -0.56
GTF3C1-206ENST00000566779 C6orf50Q9HD87 102 aa11.54□□□□□ -0.56
GTF3C1-206ENST00000566779 JPH1Q9HDC5 661 aaPredicted RBP11.54□□□□□ -0.56
GTF3C1-206ENST00000566779 PDRG1Q9NUG6 133 aa11.54□□□□□ -0.56
GTF3C1-206ENST00000566779 SETD4Q9NVD3 440 aa11.54□□□□□ -0.56
GTF3C1-206ENST00000566779 VPS54Q9P1Q0 977 aa11.54□□□□□ -0.56
GTF3C1-206ENST00000566779 TCEAL9Q9UHQ7 104 aa11.54□□□□□ -0.56
GTF3C1-206ENST00000566779 UBIAD1Q9Y5Z9 338 aa11.54□□□□□ -0.56
GTF3C1-206ENST00000566779 NLRC5Q86WI3 1866 aa11.54□□□□□ -0.56
GTF3C1-206ENST00000566779 TREHO43280 583 aa11.53□□□□□ -0.56
GTF3C1-206ENST00000566779 HOXD8P13378 290 aaPredicted RBP11.53□□□□□ -0.56
GTF3C1-206ENST00000566779 KCNA2P16389 499 aa11.53□□□□□ -0.56
GTF3C1-206ENST00000566779 PDIA3P30101 505 aaKnown RBP11.53□□□□□ -0.56
GTF3C1-206ENST00000566779 PTK7Q13308 1070 aa11.53□□□□□ -0.56
GTF3C1-206ENST00000566779 AP3B2Q13367 1082 aa11.53□□□□□ -0.56
GTF3C1-206ENST00000566779 TOB2Q14106 344 aaPredicted RBP11.53□□□□□ -0.56
GTF3C1-206ENST00000566779 GRIN2CQ14957 1233 aa11.53□□□□□ -0.56
GTF3C1-206ENST00000566779 ZNF618Q5T7W0 954 aa11.53□□□□□ -0.56
GTF3C1-206ENST00000566779 PPP2R2DQ66LE6 453 aa11.53□□□□□ -0.56
GTF3C1-206ENST00000566779 TMCO2Q7Z6W1 182 aaPredicted RBP11.53□□□□□ -0.56
GTF3C1-206ENST00000566779 TRIM22Q8IYM9 498 aa11.53□□□□□ -0.56
GTF3C1-206ENST00000566779 MICALL1Q8N3F8 863 aa11.53□□□□□ -0.56
GTF3C1-206ENST00000566779 GIMAP8Q8ND71 665 aaPredicted RBP11.53□□□□□ -0.56
GTF3C1-206ENST00000566779 CCDC12Q8WUD4 166 aaPredicted RBP11.53□□□□□ -0.56
GTF3C1-206ENST00000566779 PRDM12Q9H4Q4 367 aa11.53□□□□□ -0.56
GTF3C1-206ENST00000566779 CERS4Q9HA82 394 aa11.53□□□□□ -0.56
GTF3C1-206ENST00000566779 SLC28A3Q9HAS3 691 aa11.53□□□□□ -0.56
GTF3C1-206ENST00000566779 JADE2Q9NQC1 790 aa11.53□□□□□ -0.56
GTF3C1-206ENST00000566779 YBX2Q9Y2T7 364 aaKnown RBP11.53□□□□□ -0.56
GTF3C1-206ENST00000566779 ADAMTS3O15072 1205 aa11.52□□□□□ -0.57
GTF3C1-206ENST00000566779 PRPF3O43395 683 aaKnown RBP11.52□□□□□ -0.57
GTF3C1-206ENST00000566779 FOSP01100 380 aaPredicted RBP11.52□□□□□ -0.57
GTF3C1-206ENST00000566779 ARP10275 920 aa11.52□□□□□ -0.57
GTF3C1-206ENST00000566779 IGFBP4P22692 258 aa11.52□□□□□ -0.57
GTF3C1-206ENST00000566779 NLRP5P59047 1200 aa11.52□□□□□ -0.57
GTF3C1-206ENST00000566779 SSRP1Q08945 709 aaKnown RBP11.52□□□□□ -0.57
GTF3C1-206ENST00000566779 PPFIA1Q13136 1202 aa11.52□□□□□ -0.57
GTF3C1-206ENST00000566779 RASIP1Q5U651 963 aa11.52□□□□□ -0.57
GTF3C1-206ENST00000566779 TRMT1LQ7Z2T5 733 aaKnown RBP11.52□□□□□ -0.57
GTF3C1-206ENST00000566779 PLA2G4DQ86XP0 818 aa11.52□□□□□ -0.57
GTF3C1-206ENST00000566779 CCDC148Q8NFR7 591 aa11.52□□□□□ -0.57
GTF3C1-206ENST00000566779 LMBR1Q8WVP7 490 aa11.52□□□□□ -0.57
GTF3C1-206ENST00000566779 GAS2L1Q99501 681 aaPredicted RBP11.52□□□□□ -0.57
GTF3C1-206ENST00000566779 SENP7Q9BQF6 1050 aa11.52□□□□□ -0.57
GTF3C1-206ENST00000566779 MXRA8Q9BRK3 442 aa11.52□□□□□ -0.57
GTF3C1-206ENST00000566779 ZBED2Q9BTP6 218 aa11.52□□□□□ -0.57
GTF3C1-206ENST00000566779 GLT8D2Q9H1C3 349 aa11.52□□□□□ -0.57
GTF3C1-206ENST00000566779 RNPEPQ9H4A4 650 aa11.52□□□□□ -0.57
GTF3C1-206ENST00000566779 AZI2Q9H6S1 392 aa11.52□□□□□ -0.57
GTF3C1-206ENST00000566779 ZSWIM6Q9HCJ5 1215 aa11.52□□□□□ -0.57
GTF3C1-206ENST00000566779 KCNH7Q9NS40 1196 aa11.52□□□□□ -0.57
GTF3C1-206ENST00000566779 SLC9A2Q9UBY0 812 aa11.52□□□□□ -0.57
GTF3C1-206ENST00000566779 NID2Q14112 1375 aa11.52□□□□□ -0.57
GTF3C1-206ENST00000566779 GSTTP1A0A1W2PQM5 241 aa11.51□□□□□ -0.57
GTF3C1-206ENST00000566779 RSPH10B2B2RC85 870 aa11.51□□□□□ -0.57
GTF3C1-206ENST00000566779 BACH1O14867 736 aa11.51□□□□□ -0.57
GTF3C1-206ENST00000566779 NBNO60934 754 aa11.51□□□□□ -0.57
GTF3C1-206ENST00000566779 CA3P07451 260 aa11.51□□□□□ -0.57
GTF3C1-206ENST00000566779 RSPH10BP0C881 870 aa11.51□□□□□ -0.57
GTF3C1-206ENST00000566779 GNAT1P11488 350 aa11.51□□□□□ -0.57
GTF3C1-206ENST00000566779 SREBF1P36956 1147 aa11.51□□□□□ -0.57
GTF3C1-206ENST00000566779 FOSBP53539 338 aa11.51□□□□□ -0.57
GTF3C1-206ENST00000566779 PKN1Q16512 942 aa11.51□□□□□ -0.57
GTF3C1-206ENST00000566779 CEP55Q53EZ4 464 aa11.51□□□□□ -0.57
GTF3C1-206ENST00000566779 CPLX2Q6PUV4 134 aaKnown RBP11.51□□□□□ -0.57
GTF3C1-206ENST00000566779 SERINC5Q86VE9 423 aa11.51□□□□□ -0.57
GTF3C1-206ENST00000566779 SEPT1Q8WYJ6 367 aa11.51□□□□□ -0.57
GTF3C1-206ENST00000566779 VWCEQ96DN2 955 aa11.51□□□□□ -0.57
GTF3C1-206ENST00000566779 ZBTB10Q96DT7 871 aa11.51□□□□□ -0.57
GTF3C1-206ENST00000566779 SLC9A7Q96T83 725 aa11.51□□□□□ -0.57
GTF3C1-206ENST00000566779 RNF26Q9BY78 433 aaPredicted RBP11.51□□□□□ -0.57
GTF3C1-206ENST00000566779 FAM49AQ9H0Q0 323 aaPredicted RBP11.51□□□□□ -0.57
GTF3C1-206ENST00000566779 ERAP1Q9NZ08 941 aa11.51□□□□□ -0.57
GTF3C1-206ENST00000566779 TMEM265A0A087WTH1 108 aa11.5□□□□□ -0.57
GTF3C1-206ENST00000566779 IFNAR1P17181 557 aa11.5□□□□□ -0.57
GTF3C1-206ENST00000566779 IBSPP21815 317 aaPredicted RBP11.5□□□□□ -0.57
GTF3C1-206ENST00000566779 GNA11P29992 359 aa11.5□□□□□ -0.57
GTF3C1-206ENST00000566779 ACTR2P61160 394 aa11.5□□□□□ -0.57
GTF3C1-206ENST00000566779 WDR5P61964 334 aaKnown RBP11.5□□□□□ -0.57
GTF3C1-206ENST00000566779 DEFB103AP81534 67 aa11.5□□□□□ -0.57
GTF3C1-206ENST00000566779 ITGB3BPQ13352 177 aaPredicted RBP11.5□□□□□ -0.57
GTF3C1-206ENST00000566779 GRIK4Q16099 956 aa11.5□□□□□ -0.57
GTF3C1-206ENST00000566779 TCTN1Q2MV58 587 aa11.5□□□□□ -0.57
GTF3C1-206ENST00000566779 TRIM71Q2Q1W2 868 aaKnown RBP11.5□□□□□ -0.57
GTF3C1-206ENST00000566779 PRR16Q569H4 304 aa11.5□□□□□ -0.57
GTF3C1-206ENST00000566779 ERICH6BQ5W0A0 696 aa11.5□□□□□ -0.57
GTF3C1-206ENST00000566779 CNKSR3Q6P9H4 555 aa11.5□□□□□ -0.57
GTF3C1-206ENST00000566779 RUFY4Q6ZNE9 571 aa11.5□□□□□ -0.57
GTF3C1-206ENST00000566779 TRAPPC12Q8WVT3 735 aa11.5□□□□□ -0.57
GTF3C1-206ENST00000566779 AIFM3Q96NN9 605 aa11.5□□□□□ -0.57
GTF3C1-206ENST00000566779 SLKQ9H2G2 1235 aaPredicted RBP11.5□□□□□ -0.57
GTF3C1-206ENST00000566779 AGO4Q9HCK5 861 aaKnown RBP11.5□□□□□ -0.57
GTF3C1-206ENST00000566779 TUBE1Q9UJT0 475 aa11.5□□□□□ -0.57
GTF3C1-206ENST00000566779 MTUS1Q9ULD2 1270 aa11.5□□□□□ -0.57
GTF3C1-206ENST00000566779 ESYT2A0FGR8 921 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms