RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 PPP2R5EQ16537 467 aa23.66■■□□□ 1.38
SPSB3-208ENST00000566339 P3H4Q92791 437 aa23.66■■□□□ 1.38
SPSB3-208ENST00000566339 KAT2BQ92831 832 aa23.66■■□□□ 1.38
SPSB3-208ENST00000566339 CABS1Q96KC9 395 aa23.66■■□□□ 1.38
SPSB3-208ENST00000566339 KCTD10Q9H3F6 313 aa23.66■■□□□ 1.38
SPSB3-208ENST00000566339 TMEM260Q9NX78 707 aa23.66■■□□□ 1.38
SPSB3-208ENST00000566339 A0A087X0T9 212 aa23.65■■□□□ 1.38
SPSB3-208ENST00000566339 PNMA6FA0A0J9YX94 578 aa23.65■■□□□ 1.38
SPSB3-208ENST00000566339 RAD51CO43502 376 aa23.65■■□□□ 1.38
SPSB3-208ENST00000566339 TDP2O95551 362 aa23.65■■□□□ 1.38
SPSB3-208ENST00000566339 FAM228BP0C875 321 aa23.65■■□□□ 1.38
SPSB3-208ENST00000566339 MRPL12P52815 198 aaKnown RBP23.65■■□□□ 1.38
SPSB3-208ENST00000566339 RAPGEF1Q13905 1077 aa23.65■■□□□ 1.38
SPSB3-208ENST00000566339 NLRP14Q86W24 1093 aa23.65■■□□□ 1.38
SPSB3-208ENST00000566339 SYCE1Q8N0S2 351 aa23.65■■□□□ 1.38
SPSB3-208ENST00000566339 MYCBPAPQ8TBZ2 947 aa23.65■■□□□ 1.38
SPSB3-208ENST00000566339 AKT1S1Q96B36 256 aa23.65■■□□□ 1.38
SPSB3-208ENST00000566339 CEP95Q96GE4 821 aa23.65■■□□□ 1.38
SPSB3-208ENST00000566339 DIS3Q9Y2L1 958 aaKnown RBP23.65■■□□□ 1.38
SPSB3-208ENST00000566339 GCOM1H8Y6P7 765 aaPredicted RBP23.65■■□□□ 1.38
SPSB3-208ENST00000566339 PAEPP09466 180 aa23.65■■□□□ 1.38
SPSB3-208ENST00000566339 MYZAPP0CAP1 466 aa23.65■■□□□ 1.38
SPSB3-208ENST00000566339 CLUL1Q15846 466 aa23.65■■□□□ 1.38
SPSB3-208ENST00000566339 MAPKAPK5Q8IW41 473 aa23.65■■□□□ 1.38
SPSB3-208ENST00000566339 RASGEF1CQ8N431 466 aa23.65■■□□□ 1.38
SPSB3-208ENST00000566339 KCTD17Q8N5Z5 321 aa23.65■■□□□ 1.38
SPSB3-208ENST00000566339 NCAPGQ9BPX3 1015 aa23.65■■□□□ 1.38
SPSB3-208ENST00000566339 DDX25Q9UHL0 483 aaKnown RBP23.65■■□□□ 1.38
SPSB3-208ENST00000566339 PLAAQ9Y263 795 aa23.65■■□□□ 1.38
SPSB3-208ENST00000566339 ATF5Q9Y2D1 282 aaPredicted RBP23.65■■□□□ 1.38
SPSB3-208ENST00000566339 DAAM1Q9Y4D1 1078 aa23.65■■□□□ 1.38
SPSB3-208ENST00000566339 POTEMA6NI47 508 aa23.64■■□□□ 1.37
SPSB3-208ENST00000566339 PGRMC1O00264 195 aaKnown RBP23.64■■□□□ 1.37
SPSB3-208ENST00000566339 TULP1O00294 542 aaPredicted RBP23.64■■□□□ 1.37
SPSB3-208ENST00000566339 ZPR1O75312 459 aa23.64■■□□□ 1.37
SPSB3-208ENST00000566339 FTCDO95954 541 aa23.64■■□□□ 1.37
SPSB3-208ENST00000566339 EPS15P42566 896 aa23.64■■□□□ 1.37
SPSB3-208ENST00000566339 BTDP43251 543 aa23.64■■□□□ 1.37
SPSB3-208ENST00000566339 MOXD1Q6UVY6 613 aa23.64■■□□□ 1.37
SPSB3-208ENST00000566339 KCNK18Q7Z418 384 aa23.64■■□□□ 1.37
SPSB3-208ENST00000566339 SH2D3CQ8N5H7 860 aa23.64■■□□□ 1.37
SPSB3-208ENST00000566339 CCT8L2Q96SF2 557 aa23.64■■□□□ 1.37
SPSB3-208ENST00000566339 NENFQ9UMX5 172 aa23.64■■□□□ 1.37
SPSB3-208ENST00000566339 TRAF3IP3Q9Y228 551 aa23.64■■□□□ 1.37
SPSB3-208ENST00000566339 FLOT1O75955 427 aa23.63■■□□□ 1.37
SPSB3-208ENST00000566339 IRX3P78415 501 aaPredicted RBP23.63■■□□□ 1.37
SPSB3-208ENST00000566339 LRRC41Q15345 812 aa23.63■■□□□ 1.37
SPSB3-208ENST00000566339 SMIM5Q71RC9 77 aa23.63■■□□□ 1.37
SPSB3-208ENST00000566339 SLFN11Q7Z7L1 901 aa23.63■■□□□ 1.37
SPSB3-208ENST00000566339 VPS36Q86VN1 386 aa23.63■■□□□ 1.37
SPSB3-208ENST00000566339 FMNL3Q8IVF7 1028 aa23.63■■□□□ 1.37
SPSB3-208ENST00000566339 TEX11Q8IYF3 940 aa23.63■■□□□ 1.37
SPSB3-208ENST00000566339 LRRC57Q8N9N7 239 aa23.63■■□□□ 1.37
SPSB3-208ENST00000566339 SEC14L1Q92503 715 aa23.63■■□□□ 1.37
SPSB3-208ENST00000566339 CUL5Q93034 780 aa23.63■■□□□ 1.37
SPSB3-208ENST00000566339 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.63■■□□□ 1.372e-25■■□□□ 13
SPSB3-208ENST00000566339 SUCLA2Q9P2R7 463 aaPredicted RBP23.63■■□□□ 1.37
SPSB3-208ENST00000566339 TTC7AQ9ULT0 858 aaPredicted RBP23.63■■□□□ 1.37
SPSB3-208ENST00000566339 GRAPQ13588 217 aa23.63■■□□□ 1.37
SPSB3-208ENST00000566339 C6orf89Q6UWU4 347 aa23.63■■□□□ 1.37
SPSB3-208ENST00000566339 MAATS1Q7Z4T9 603 aa23.63■■□□□ 1.37
SPSB3-208ENST00000566339 CCDC26Q8TAB7 109 aa23.63■■□□□ 1.37
SPSB3-208ENST00000566339 GRAPLQ8TC17 118 aaPredicted RBP23.63■■□□□ 1.37
SPSB3-208ENST00000566339 NUDT12Q9BQG2 462 aa23.63■■□□□ 1.37
SPSB3-208ENST00000566339 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.63■■□□□ 1.37
SPSB3-208ENST00000566339 METTL14Q9HCE5 456 aaKnown RBP23.63■■□□□ 1.37
SPSB3-208ENST00000566339 EMILIN3Q9NT22 766 aa23.63■■□□□ 1.37
SPSB3-208ENST00000566339 PPP1R1BQ9UD71 204 aaPredicted RBP23.63■■□□□ 1.37
SPSB3-208ENST00000566339 PCDHA12Q9UN75 941 aa23.63■■□□□ 1.37
SPSB3-208ENST00000566339 SAMM50Q9Y512 469 aa23.63■■□□□ 1.37
SPSB3-208ENST00000566339 GAKO14976 1311 aa23.62■■□□□ 1.37
SPSB3-208ENST00000566339 IGKV6D-41A0A0C4DH26 115 aa23.62■■□□□ 1.37
SPSB3-208ENST00000566339 USP17L5A8MUK1 530 aa23.62■■□□□ 1.37
SPSB3-208ENST00000566339 H0YGN5 161 aa23.62■■□□□ 1.37
SPSB3-208ENST00000566339 GNPATO15228 680 aa23.62■■□□□ 1.37
SPSB3-208ENST00000566339 ATP1A2P50993 1020 aa23.62■■□□□ 1.37
SPSB3-208ENST00000566339 CDR1P51861 262 aa23.62■■□□□ 1.37
SPSB3-208ENST00000566339 ATP2B2Q01814 1243 aa23.62■■□□□ 1.37
SPSB3-208ENST00000566339 CEP85LQ5SZL2 805 aa23.62■■□□□ 1.37
SPSB3-208ENST00000566339 KCTD16Q68DU8 428 aa23.62■■□□□ 1.37
SPSB3-208ENST00000566339 IRF2BP2Q7Z5L9 587 aa23.62■■□□□ 1.37
SPSB3-208ENST00000566339 HAS1Q92839 578 aa23.62■■□□□ 1.37
SPSB3-208ENST00000566339 VCPKMTQ9H867 229 aa23.62■■□□□ 1.37
SPSB3-208ENST00000566339 MTMR4Q9NYA4 1195 aa23.62■■□□□ 1.37
SPSB3-208ENST00000566339 ADAMTS1Q9UHI8 967 aa23.62■■□□□ 1.37
SPSB3-208ENST00000566339 NFS1Q9Y697 457 aa23.62■■□□□ 1.37
SPSB3-208ENST00000566339 CAPN7Q9Y6W3 813 aa23.62■■□□□ 1.37
SPSB3-208ENST00000566339 UTRNP46939 3433 aa23.61■■□□□ 1.37
SPSB3-208ENST00000566339 GTPBP10A4D1E9 387 aaKnown RBP23.61■■□□□ 1.37
SPSB3-208ENST00000566339 PLA2G4BP0C869 781 aa23.61■■□□□ 1.37
SPSB3-208ENST00000566339 SMTNP53814 917 aa23.61■■□□□ 1.37
SPSB3-208ENST00000566339 ACTN3Q08043 901 aaPredicted RBP23.61■■□□□ 1.37
SPSB3-208ENST00000566339 KCNH2Q12809 1159 aa23.61■■□□□ 1.37
SPSB3-208ENST00000566339 ADAM9Q13443 819 aa23.61■■□□□ 1.37
SPSB3-208ENST00000566339 DIXDC1Q155Q3 683 aa23.61■■□□□ 1.37
SPSB3-208ENST00000566339 SLC4A8Q2Y0W8 1093 aa23.61■■□□□ 1.37
SPSB3-208ENST00000566339 SCFD1Q8WVM8 642 aa23.61■■□□□ 1.37
SPSB3-208ENST00000566339 HINFPQ9BQA5 517 aa23.61■■□□□ 1.37
SPSB3-208ENST00000566339 VAT1LQ9HCJ6 419 aa23.61■■□□□ 1.37
SPSB3-208ENST00000566339 FAM114A2Q9NRY5 505 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms