RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 ZNF460Q14592 562 aa6.35□□□□□ -1.39
CHD9-215ENST00000565442 R3HDM1Q15032 1099 aaKnown RBP6.35□□□□□ -1.39
CHD9-215ENST00000565442 LBX2Q6XYB7 198 aa6.35□□□□□ -1.39
CHD9-215ENST00000565442 LRRTM3Q86VH5 581 aa6.35□□□□□ -1.39
CHD9-215ENST00000565442 ZFYVE21Q9BQ24 234 aa6.35□□□□□ -1.39
CHD9-215ENST00000565442 MAGEC2Q9UBF1 373 aaPredicted RBP6.35□□□□□ -1.39
CHD9-215ENST00000565442 FBXL7Q9UJT9 491 aa6.35□□□□□ -1.39
CHD9-215ENST00000565442 TCAF1Q9Y4C2 921 aa6.35□□□□□ -1.39
CHD9-215ENST00000565442 TNPO3Q9Y5L0 923 aaKnown RBP6.35□□□□□ -1.39
CHD9-215ENST00000565442 A0A087X0B3 334 aa6.34□□□□□ -1.39
CHD9-215ENST00000565442 TCRBV16S1A1N1A0A5B0 115 aa6.34□□□□□ -1.39
CHD9-215ENST00000565442 MUSKO15146 869 aa6.34□□□□□ -1.39
CHD9-215ENST00000565442 MYO1BO43795 1136 aa6.34□□□□□ -1.39
CHD9-215ENST00000565442 OPA1O60313 960 aa6.34□□□□□ -1.39
CHD9-215ENST00000565442 NPHS1O60500 1241 aa6.34□□□□□ -1.39
CHD9-215ENST00000565442 PDE8AO60658 829 aa6.34□□□□□ -1.39
CHD9-215ENST00000565442 FUCA1P04066 466 aa6.34□□□□□ -1.39
CHD9-215ENST00000565442 BCL6P41182 706 aa6.34□□□□□ -1.39
CHD9-215ENST00000565442 RBM10P98175 930 aaKnown RBP6.34□□□□□ -1.39
CHD9-215ENST00000565442 SPDYAQ5MJ70 313 aa6.34□□□□□ -1.39
CHD9-215ENST00000565442 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.34□□□□□ -1.39
CHD9-215ENST00000565442 IGDCC4Q8TDY8 1250 aa6.34□□□□□ -1.39
CHD9-215ENST00000565442 DPF3Q92784 378 aa6.34□□□□□ -1.39
CHD9-215ENST00000565442 GPATCH3Q96I76 525 aa6.34□□□□□ -1.39
CHD9-215ENST00000565442 TARS2Q9BW92 718 aaKnown RBP6.34□□□□□ -1.39
CHD9-215ENST00000565442 AP5M1Q9H0R1 490 aa6.34□□□□□ -1.39
CHD9-215ENST00000565442 INTS7Q9NVH2 962 aaKnown RBP6.34□□□□□ -1.39
CHD9-215ENST00000565442 TIMM13Q9Y5L4 95 aaPredicted RBP6.34□□□□□ -1.39
CHD9-215ENST00000565442 CYP1A1P04798 512 aaPredicted RBP6.33□□□□□ -1.4
CHD9-215ENST00000565442 ZNF28P17035 718 aa6.33□□□□□ -1.4
CHD9-215ENST00000565442 RPL11P62913 178 aaKnown RBP6.33□□□□□ -1.4
CHD9-215ENST00000565442 PTPROQ16827 1216 aa6.33□□□□□ -1.4
CHD9-215ENST00000565442 PRAMEF18Q5VWM3 479 aa6.33□□□□□ -1.4
CHD9-215ENST00000565442 THNSL2Q86YJ6 484 aa6.33□□□□□ -1.4
CHD9-215ENST00000565442 UBR7Q8N806 425 aa6.33□□□□□ -1.4
CHD9-215ENST00000565442 ALG1Q9BT22 464 aa6.33□□□□□ -1.4
CHD9-215ENST00000565442 PPARGC1AQ9UBK2 798 aaKnown RBP6.33□□□□□ -1.4
CHD9-215ENST00000565442 PATE3B3GLJ2 98 aa6.32□□□□□ -1.4
CHD9-215ENST00000565442 ASLP04424 464 aa6.32□□□□□ -1.4
CHD9-215ENST00000565442 APPP05067 770 aa6.32□□□□□ -1.4
CHD9-215ENST00000565442 SRGAP2CP0DJJ0 459 aa6.32□□□□□ -1.4
CHD9-215ENST00000565442 IGFALSP35858 605 aa6.32□□□□□ -1.4
CHD9-215ENST00000565442 EPHB4P54760 987 aa6.32□□□□□ -1.4
CHD9-215ENST00000565442 LSAMPQ13449 338 aa6.32□□□□□ -1.4
CHD9-215ENST00000565442 KIZQ2M2Z5 673 aa6.32□□□□□ -1.4
CHD9-215ENST00000565442 CEP68Q76N32 757 aa6.32□□□□□ -1.4
CHD9-215ENST00000565442 ZC3H7AQ8IWR0 971 aaKnown RBP6.32□□□□□ -1.4
CHD9-215ENST00000565442 PLEKHO2Q8TD55 490 aa6.32□□□□□ -1.4
CHD9-215ENST00000565442 MBD6Q96DN6 1003 aa6.32□□□□□ -1.4
CHD9-215ENST00000565442 WWC2-AS2Q96NR7 200 aa6.32□□□□□ -1.4
CHD9-215ENST00000565442 SEMA4AQ9H3S1 761 aa6.32□□□□□ -1.4
CHD9-215ENST00000565442 MARCH2Q9P0N8 246 aa6.32□□□□□ -1.4
CHD9-215ENST00000565442 COL4A3BPQ9Y5P4 624 aa6.32□□□□□ -1.4
CHD9-215ENST00000565442 FAM83GA6ND36 823 aa6.31□□□□□ -1.4
CHD9-215ENST00000565442 SGSM2O43147 1006 aa6.31□□□□□ -1.4
CHD9-215ENST00000565442 SOD2P04179 222 aa6.31□□□□□ -1.4
CHD9-215ENST00000565442 JMJD7P0C870 316 aa6.31□□□□□ -1.4
CHD9-215ENST00000565442 NAT1P18440 290 aa6.31□□□□□ -1.4
CHD9-215ENST00000565442 FPR2P25090 351 aa6.31□□□□□ -1.4
CHD9-215ENST00000565442 CNGA1P29973 690 aa6.31□□□□□ -1.4
CHD9-215ENST00000565442 NEK4P51957 841 aa6.31□□□□□ -1.4
CHD9-215ENST00000565442 PPP2CBP62714 309 aa6.31□□□□□ -1.4
CHD9-215ENST00000565442 PPP2CAP67775 309 aa6.31□□□□□ -1.4
CHD9-215ENST00000565442 PAK1Q13153 545 aa6.31□□□□□ -1.4
CHD9-215ENST00000565442 PKN3Q6P5Z2 889 aa6.31□□□□□ -1.4
CHD9-215ENST00000565442 ABHD17CQ6PCB6 329 aa6.31□□□□□ -1.4
CHD9-215ENST00000565442 ARHGEF18Q6ZSZ5 1173 aa6.31□□□□□ -1.4
CHD9-215ENST00000565442 NLRP10Q86W26 655 aa6.31□□□□□ -1.4
CHD9-215ENST00000565442 TEX2Q8IWB9 1127 aa6.31□□□□□ -1.4
CHD9-215ENST00000565442 FAM126BQ8IXS8 530 aa6.31□□□□□ -1.4
CHD9-215ENST00000565442 PCDH19Q8TAB3 1148 aa6.31□□□□□ -1.4
CHD9-215ENST00000565442 IPPKQ9H8X2 491 aa6.31□□□□□ -1.4
CHD9-215ENST00000565442 JADE2Q9NQC1 790 aa6.31□□□□□ -1.4
CHD9-215ENST00000565442 CLDND1Q9NY35 253 aa6.31□□□□□ -1.4
CHD9-215ENST00000565442 GSG1L2A8MUP6 293 aa6.3□□□□□ -1.4
CHD9-215ENST00000565442 ARVCFO00192 962 aa6.3□□□□□ -1.4
CHD9-215ENST00000565442 KPNA6O60684 536 aa6.3□□□□□ -1.4
CHD9-215ENST00000565442 VIL1P09327 827 aaKnown RBP6.3□□□□□ -1.4
CHD9-215ENST00000565442 KCNA6P17658 529 aa6.3□□□□□ -1.4
CHD9-215ENST00000565442 GRK2P25098 689 aa6.3□□□□□ -1.4
CHD9-215ENST00000565442 GRK3P35626 688 aa6.3□□□□□ -1.4
CHD9-215ENST00000565442 STAT3P40763 770 aa6.3□□□□□ -1.4
CHD9-215ENST00000565442 GTF2A2P52657 109 aa6.3□□□□□ -1.4
CHD9-215ENST00000565442 TGFB2P61812 414 aa6.3□□□□□ -1.4
CHD9-215ENST00000565442 ADAM9Q13443 819 aa6.3□□□□□ -1.4
CHD9-215ENST00000565442 FHL2Q14192 279 aa6.3□□□□□ -1.4
CHD9-215ENST00000565442 PCBP1Q15365 356 aaKnown RBP eCLIP6.3□□□□□ -1.4
CHD9-215ENST00000565442 CHAC2Q8WUX2 184 aa6.3□□□□□ -1.4
CHD9-215ENST00000565442 TRMT2BQ96GJ1 504 aaKnown RBP6.3□□□□□ -1.4
CHD9-215ENST00000565442 TMEM169Q96HH4 297 aa6.3□□□□□ -1.4
CHD9-215ENST00000565442 YTHDC1Q96MU7 727 aaKnown RBP6.3□□□□□ -1.4
CHD9-215ENST00000565442 PUS7Q96PZ0 661 aaKnown RBP6.3□□□□□ -1.4
CHD9-215ENST00000565442 KCNJ15Q99712 375 aa6.3□□□□□ -1.4
CHD9-215ENST00000565442 JAM3Q9BX67 310 aa6.3□□□□□ -1.4
CHD9-215ENST00000565442 CDIP1Q9H305 208 aa6.3□□□□□ -1.4
CHD9-215ENST00000565442 TMX1Q9H3N1 280 aa6.3□□□□□ -1.4
CHD9-215ENST00000565442 SAMD15Q9P1V8 674 aa6.3□□□□□ -1.4
CHD9-215ENST00000565442 C11orf21Q9P2W6 132 aa6.3□□□□□ -1.4
CHD9-215ENST00000565442 COQ6Q9Y2Z9 468 aa6.3□□□□□ -1.4
CHD9-215ENST00000565442 TESMINQ9Y4I5 508 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms