RNA–Protein interactions for RNA: ENST00000564745.1

CDH1-207, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-207ENST00000564745 PHOSPHO1Q8TCT1 267 aa6.54□□□□□ -1.36
CDH1-207ENST00000564745 TOPORSQ9NS56 1045 aaPredicted RBP6.54□□□□□ -1.36
CDH1-207ENST00000564745 C14orf119Q9NWQ9 140 aa6.54□□□□□ -1.36
CDH1-207ENST00000564745 NUDT5Q9UKK9 219 aa6.54□□□□□ -1.36
CDH1-207ENST00000564745 EID1Q9Y6B2 187 aa6.54□□□□□ -1.36
CDH1-207ENST00000564745 MMEP08473 750 aa6.53□□□□□ -1.36
CDH1-207ENST00000564745 PDE6BP35913 854 aa6.53□□□□□ -1.36
CDH1-207ENST00000564745 SESN3P58005 492 aa6.53□□□□□ -1.36
CDH1-207ENST00000564745 RBM10P98175 930 aaKnown RBP6.53□□□□□ -1.36
CDH1-207ENST00000564745 PAN2Q504Q3 1202 aaKnown RBP6.53□□□□□ -1.36
CDH1-207ENST00000564745 CC2D1AQ6P1N0 951 aaPredicted RBP6.53□□□□□ -1.36
CDH1-207ENST00000564745 RTF1Q92541 710 aaKnown RBP6.53□□□□□ -1.36
CDH1-207ENST00000564745 AHCYL2Q96HN2 611 aaKnown RBP6.53□□□□□ -1.36
CDH1-207ENST00000564745 SEMA4AQ9H3S1 761 aa6.53□□□□□ -1.36
CDH1-207ENST00000564745 RBPJLQ9UBG7 517 aa6.53□□□□□ -1.36
CDH1-207ENST00000564745 MT-CO1P00395 513 aa6.52□□□□□ -1.37
CDH1-207ENST00000564745 STAT5AP42229 794 aa6.52□□□□□ -1.37
CDH1-207ENST00000564745 NEK2P51955 445 aa6.52□□□□□ -1.37
CDH1-207ENST00000564745 SCAND1P57086 179 aa6.52□□□□□ -1.37
CDH1-207ENST00000564745 PHC1P78364 1004 aa6.52□□□□□ -1.37
CDH1-207ENST00000564745 NR1I3Q14994 352 aa6.52□□□□□ -1.37
CDH1-207ENST00000564745 PDCD1Q15116 288 aa6.52□□□□□ -1.37
CDH1-207ENST00000564745 LRRC41Q15345 812 aa6.52□□□□□ -1.37
CDH1-207ENST00000564745 INAVAQ3KP66 663 aa6.52□□□□□ -1.37
CDH1-207ENST00000564745 ATG4DQ86TL0 474 aaPredicted RBP6.52□□□□□ -1.37
CDH1-207ENST00000564745 PASD1Q8IV76 773 aa6.52□□□□□ -1.37
CDH1-207ENST00000564745 TRIM48Q8IWZ4 208 aa6.52□□□□□ -1.37
CDH1-207ENST00000564745 ASB15Q8WXK1 588 aa6.52□□□□□ -1.37
CDH1-207ENST00000564745 ERCC4Q92889 916 aaPredicted RBP6.52□□□□□ -1.37
CDH1-207ENST00000564745 TSPAN17Q96FV3 270 aa6.52□□□□□ -1.37
CDH1-207ENST00000564745 C16orf92Q96LL3 132 aa6.52□□□□□ -1.37
CDH1-207ENST00000564745 SYT3Q9BQG1 590 aa6.52□□□□□ -1.37
CDH1-207ENST00000564745 KCNK12Q9HB15 430 aa6.52□□□□□ -1.37
CDH1-207ENST00000564745 ACSS2Q9NR19 701 aa6.52□□□□□ -1.37
CDH1-207ENST00000564745 CHPF2Q9P2E5 772 aa6.52□□□□□ -1.37
CDH1-207ENST00000564745 NUB1Q9Y5A7 615 aa6.52□□□□□ -1.37
CDH1-207ENST00000564745 OR14I1A6ND48 311 aa6.51□□□□□ -1.37
CDH1-207ENST00000564745 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.51□□□□□ -1.37
CDH1-207ENST00000564745 K7ESF4 209 aa6.51□□□□□ -1.37
CDH1-207ENST00000564745 FOXP2O15409 715 aa6.51□□□□□ -1.37
CDH1-207ENST00000564745 LRG1P02750 347 aa6.51□□□□□ -1.37
CDH1-207ENST00000564745 FAHP16930 419 aa6.51□□□□□ -1.37
CDH1-207ENST00000564745 SDHAP31040 664 aa6.51□□□□□ -1.37
CDH1-207ENST00000564745 MC4RP32245 332 aa6.51□□□□□ -1.37
CDH1-207ENST00000564745 LSP1P33241 339 aa6.51□□□□□ -1.37
CDH1-207ENST00000564745 GJA4P35212 333 aa6.51□□□□□ -1.37
CDH1-207ENST00000564745 MAPKAPK2P49137 400 aa6.51□□□□□ -1.37
CDH1-207ENST00000564745 RAB27AP51159 221 aa6.51□□□□□ -1.37
CDH1-207ENST00000564745 NBPF11Q86T75 865 aa6.51□□□□□ -1.37
CDH1-207ENST00000564745 RASSF3Q86WH2 238 aa6.51□□□□□ -1.37
CDH1-207ENST00000564745 FMNL3Q8IVF7 1028 aa6.51□□□□□ -1.37
CDH1-207ENST00000564745 FAM26EQ8N5C1 309 aa6.51□□□□□ -1.37
CDH1-207ENST00000564745 ZNF610Q8N9Z0 462 aa6.51□□□□□ -1.37
CDH1-207ENST00000564745 TSR2Q969E8 191 aaKnown RBP6.51□□□□□ -1.37
CDH1-207ENST00000564745 ZNF496Q96IT1 587 aaPredicted RBP6.51□□□□□ -1.37
CDH1-207ENST00000564745 PDGFDQ9GZP0 370 aaPredicted RBP6.51□□□□□ -1.37
CDH1-207ENST00000564745 SLC6A17Q9H1V8 727 aa6.51□□□□□ -1.37
CDH1-207ENST00000564745 NOC2LQ9Y3T9 749 aaKnown RBP6.51□□□□□ -1.37
CDH1-207ENST00000564745 SHTN1A0MZ66 631 aa6.5□□□□□ -1.37
CDH1-207ENST00000564745 FZD9O00144 591 aa6.5□□□□□ -1.37
CDH1-207ENST00000564745 H2AFYO75367 372 aaKnown RBP6.5□□□□□ -1.37
CDH1-207ENST00000564745 FBXO21O94952 628 aa6.5□□□□□ -1.37
CDH1-207ENST00000564745 ZBTB7AO95365 584 aa6.5□□□□□ -1.37
CDH1-207ENST00000564745 PAPLNO95428 1278 aa6.5□□□□□ -1.37
CDH1-207ENST00000564745 CYP17A1P05093 508 aa6.5□□□□□ -1.37
CDH1-207ENST00000564745 MYBL2P10244 700 aa6.5□□□□□ -1.37
CDH1-207ENST00000564745 YBX1P67809 324 aaKnown RBP6.5□□□□□ -1.37
CDH1-207ENST00000564745 ZNF200P98182 395 aaPredicted RBP6.5□□□□□ -1.37
CDH1-207ENST00000564745 KLF1Q13351 362 aaPredicted RBP6.5□□□□□ -1.37
CDH1-207ENST00000564745 PCBP2Q15366 365 aaKnown RBP eCLIP6.5□□□□□ -1.37
CDH1-207ENST00000564745 PTPN21Q16825 1174 aa6.5□□□□□ -1.37
CDH1-207ENST00000564745 ZC3H14Q6PJT7 736 aaKnown RBP6.5□□□□□ -1.37
CDH1-207ENST00000564745 TMC6Q7Z403 805 aa6.5□□□□□ -1.37
CDH1-207ENST00000564745 ZSWIM9Q86XI8 627 aa6.5□□□□□ -1.37
CDH1-207ENST00000564745 TTLL11Q8NHH1 800 aa6.5□□□□□ -1.37
CDH1-207ENST00000564745 TGFBRAP1Q8WUH2 860 aa6.5□□□□□ -1.37
CDH1-207ENST00000564745 ALG3Q92685 438 aa6.5□□□□□ -1.37
CDH1-207ENST00000564745 FOXRED1Q96CU9 486 aaPredicted RBP6.5□□□□□ -1.37
CDH1-207ENST00000564745 HOOK2Q96ED9 719 aa6.5□□□□□ -1.37
CDH1-207ENST00000564745 GBP4Q96PP9 640 aa6.5□□□□□ -1.37
CDH1-207ENST00000564745 MENTQ9BUN1 341 aa6.5□□□□□ -1.37
CDH1-207ENST00000564745 ZDHHC5Q9C0B5 715 aa6.5□□□□□ -1.37
CDH1-207ENST00000564745 DTLQ9NZJ0 730 aa6.5□□□□□ -1.37
CDH1-207ENST00000564745 WASF3Q9UPY6 502 aa6.5□□□□□ -1.37
CDH1-207ENST00000564745 AKAP10O43572 662 aa6.49□□□□□ -1.37
CDH1-207ENST00000564745 KDM1AO60341 852 aa6.49□□□□□ -1.37
CDH1-207ENST00000564745 GLI1P08151 1106 aa6.49□□□□□ -1.37
CDH1-207ENST00000564745 VIPR1P32241 457 aa6.49□□□□□ -1.37
CDH1-207ENST00000564745 EPHB1P54762 984 aa6.49□□□□□ -1.37
CDH1-207ENST00000564745 LRRC32Q14392 662 aa6.49□□□□□ -1.37
CDH1-207ENST00000564745 SLC9A5Q14940 896 aa6.49□□□□□ -1.37
CDH1-207ENST00000564745 KCNMB1Q16558 191 aa6.49□□□□□ -1.37
CDH1-207ENST00000564745 GPR158Q5T848 1215 aa6.49□□□□□ -1.37
CDH1-207ENST00000564745 TEPPQ6URK8 271 aa6.49□□□□□ -1.37
CDH1-207ENST00000564745 RTN4RL1Q86UN2 441 aaPredicted RBP6.49□□□□□ -1.37
CDH1-207ENST00000564745 PROSER1Q86XN7 944 aa6.49□□□□□ -1.37
CDH1-207ENST00000564745 MIB1Q86YT6 1006 aa6.49□□□□□ -1.37
CDH1-207ENST00000564745 FAM126BQ8IXS8 530 aa6.49□□□□□ -1.37
CDH1-207ENST00000564745 LIN37Q96GY3 246 aaPredicted RBP6.49□□□□□ -1.37
CDH1-207ENST00000564745 FUBP3Q96I24 572 aaKnown RBP eCLIP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms