RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 STAT5BP51692 787 aa13.9□□□□□ -0.18
GTF3C1-204ENST00000564664 IER5Q5VY09 327 aa13.9□□□□□ -0.18
GTF3C1-204ENST00000564664 TYW1BQ6NUM6 668 aa13.9□□□□□ -0.18
GTF3C1-204ENST00000564664 BLOC1S2Q6QNY1 142 aa13.9□□□□□ -0.18
GTF3C1-204ENST00000564664 TMCO2Q7Z6W1 182 aaPredicted RBP13.9□□□□□ -0.18
GTF3C1-204ENST00000564664 ADAMTS19Q8TE59 1207 aa13.9□□□□□ -0.18
GTF3C1-204ENST00000564664 CCDC136Q96JN2 1154 aa13.9□□□□□ -0.18
GTF3C1-204ENST00000564664 TCEANC2Q96MN5 208 aa13.9□□□□□ -0.18
GTF3C1-204ENST00000564664 ANO3Q9BYT9 981 aa13.9□□□□□ -0.18
GTF3C1-204ENST00000564664 TUBE1Q9UJT0 475 aa13.9□□□□□ -0.18
GTF3C1-204ENST00000564664 TELO2Q9Y4R8 837 aa13.9□□□□□ -0.18
GTF3C1-204ENST00000564664 SPTBN5Q9NRC6 3674 aaKnown RBP13.89□□□□□ -0.19
GTF3C1-204ENST00000564664 PRPF3O43395 683 aaKnown RBP13.89□□□□□ -0.19
GTF3C1-204ENST00000564664 CTSHP09668 335 aa13.89□□□□□ -0.19
GTF3C1-204ENST00000564664 SCG2P13521 617 aa13.89□□□□□ -0.19
GTF3C1-204ENST00000564664 GNA11P29992 359 aa13.89□□□□□ -0.19
GTF3C1-204ENST00000564664 CDC27P30260 824 aa13.89□□□□□ -0.19
GTF3C1-204ENST00000564664 ADD1P35611 737 aaKnown RBP13.89□□□□□ -0.19
GTF3C1-204ENST00000564664 ACTR2P61160 394 aa13.89□□□□□ -0.19
GTF3C1-204ENST00000564664 MGAT3Q09327 533 aa13.89□□□□□ -0.19
GTF3C1-204ENST00000564664 PTPROQ16827 1216 aa13.89□□□□□ -0.19
GTF3C1-204ENST00000564664 MARCH8Q5T0T0 291 aa13.89□□□□□ -0.19
GTF3C1-204ENST00000564664 FAM117BQ6P1L5 589 aa13.89□□□□□ -0.19
GTF3C1-204ENST00000564664 Q6ZUG5 572 aa13.89□□□□□ -0.19
GTF3C1-204ENST00000564664 CYP2W1Q8TAV3 490 aa13.89□□□□□ -0.19
GTF3C1-204ENST00000564664 UHRF1Q96T88 793 aaPredicted RBP13.89□□□□□ -0.19
GTF3C1-204ENST00000564664 YME1L1Q96TA2 773 aa13.89□□□□□ -0.19
GTF3C1-204ENST00000564664 AGXT2Q9BYV1 514 aa13.89□□□□□ -0.19
GTF3C1-204ENST00000564664 ZMYND12Q9H0C1 365 aa13.89□□□□□ -0.19
GTF3C1-204ENST00000564664 AGO4Q9HCK5 861 aaKnown RBP13.89□□□□□ -0.19
GTF3C1-204ENST00000564664 C6orf50Q9HD87 102 aa13.89□□□□□ -0.19
GTF3C1-204ENST00000564664 PCDHA2Q9Y5H9 948 aa13.89□□□□□ -0.19
GTF3C1-204ENST00000564664 PTPRSQ13332 1948 aa13.88□□□□□ -0.19
GTF3C1-204ENST00000564664 IGKV6D-21A0A0A0MT36 114 aa13.88□□□□□ -0.19
GTF3C1-204ENST00000564664 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.88□□□□□ -0.19
GTF3C1-204ENST00000564664 ARP10275 920 aa13.88□□□□□ -0.19
GTF3C1-204ENST00000564664 INSRRP14616 1297 aa13.88□□□□□ -0.19
GTF3C1-204ENST00000564664 AKAP17AQ02040 695 aaKnown RBP13.88□□□□□ -0.19
GTF3C1-204ENST00000564664 RUFY4Q6ZNE9 571 aa13.88□□□□□ -0.19
GTF3C1-204ENST00000564664 SKAP1Q86WV1 359 aa13.88□□□□□ -0.19
GTF3C1-204ENST00000564664 FBXO22Q8NEZ5 403 aa13.88□□□□□ -0.19
GTF3C1-204ENST00000564664 BICD2Q8TD16 824 aa13.88□□□□□ -0.19
GTF3C1-204ENST00000564664 DNAJB3Q8WWF6 145 aa13.88□□□□□ -0.19
GTF3C1-204ENST00000564664 IL17RAQ96F46 866 aa13.88□□□□□ -0.19
GTF3C1-204ENST00000564664 JAKMIP1Q96N16 626 aaKnown RBP13.88□□□□□ -0.19
GTF3C1-204ENST00000564664 PCYT2Q99447 389 aa13.88□□□□□ -0.19
GTF3C1-204ENST00000564664 FTHL17Q9BXU8 183 aa13.88□□□□□ -0.19
GTF3C1-204ENST00000564664 TBC1D22BQ9NU19 505 aa13.88□□□□□ -0.19
GTF3C1-204ENST00000564664 PKD2L1Q9P0L9 805 aa13.88□□□□□ -0.19
GTF3C1-204ENST00000564664 NAP1L2Q9ULW6 460 aaPredicted RBP13.88□□□□□ -0.19
GTF3C1-204ENST00000564664 RWDD3Q9Y3V2 267 aa13.88□□□□□ -0.19
GTF3C1-204ENST00000564664 SNX14Q9Y5W7 946 aa13.88□□□□□ -0.19
GTF3C1-204ENST00000564664 DOCK5Q9H7D0 1870 aa13.88□□□□□ -0.19
GTF3C1-204ENST00000564664 MICAL3Q7RTP6 2002 aa13.88□□□□□ -0.19
GTF3C1-204ENST00000564664 NID2Q14112 1375 aa13.87□□□□□ -0.19
GTF3C1-204ENST00000564664 POTEB3A0JP26 581 aa13.87□□□□□ -0.19
GTF3C1-204ENST00000564664 M0QZ92 97 aa13.87□□□□□ -0.19
GTF3C1-204ENST00000564664 ENPP3O14638 875 aa13.87□□□□□ -0.19
GTF3C1-204ENST00000564664 RB1P06400 928 aa13.87□□□□□ -0.19
GTF3C1-204ENST00000564664 MARK3P27448 753 aa13.87□□□□□ -0.19
GTF3C1-204ENST00000564664 EVCP57679 992 aa13.87□□□□□ -0.19
GTF3C1-204ENST00000564664 MRPS6P82932 125 aaKnown RBP13.87□□□□□ -0.19
GTF3C1-204ENST00000564664 APOBRQ0VD83 1088 aa13.87□□□□□ -0.19
GTF3C1-204ENST00000564664 LPIN1Q14693 890 aa13.87□□□□□ -0.19
GTF3C1-204ENST00000564664 EPC2Q52LR7 807 aa13.87□□□□□ -0.19
GTF3C1-204ENST00000564664 FAM160B1Q5W0V3 765 aa13.87□□□□□ -0.19
GTF3C1-204ENST00000564664 KRT40Q6A162 431 aa13.87□□□□□ -0.19
GTF3C1-204ENST00000564664 POTEBQ6S5H4 581 aa13.87□□□□□ -0.19
GTF3C1-204ENST00000564664 TSHZ1Q6ZSZ6 1077 aa13.87□□□□□ -0.19
GTF3C1-204ENST00000564664 BRF1Q92994 677 aa13.87□□□□□ -0.19
GTF3C1-204ENST00000564664 MRPL38Q96DV4 380 aaKnown RBP13.87□□□□□ -0.19
GTF3C1-204ENST00000564664 TRPC6Q9Y210 931 aa13.87□□□□□ -0.19
GTF3C1-204ENST00000564664 SMIM35A0A1B0GVV1 85 aa13.86□□□□□ -0.19
GTF3C1-204ENST00000564664 H3BNC9 293 aa13.86□□□□□ -0.19
GTF3C1-204ENST00000564664 HBP1O60381 514 aa13.86□□□□□ -0.19
GTF3C1-204ENST00000564664 UPP2O95045 317 aa13.86□□□□□ -0.19
GTF3C1-204ENST00000564664 GHRP10912 638 aa13.86□□□□□ -0.19
GTF3C1-204ENST00000564664 RPS6KB1P23443 525 aa13.86□□□□□ -0.19
GTF3C1-204ENST00000564664 SETQ01105 290 aaPredicted RBP13.86□□□□□ -0.19
GTF3C1-204ENST00000564664 ITGB3BPQ13352 177 aaPredicted RBP13.86□□□□□ -0.19
GTF3C1-204ENST00000564664 PLCB4Q15147 1175 aa13.86□□□□□ -0.19
GTF3C1-204ENST00000564664 FBXO47Q5MNV8 452 aa13.86□□□□□ -0.19
GTF3C1-204ENST00000564664 MIS18BP1Q6P0N0 1132 aa13.86□□□□□ -0.19
GTF3C1-204ENST00000564664 ABHD15Q6UXT9 468 aa13.86□□□□□ -0.19
GTF3C1-204ENST00000564664 SPRED2Q7Z698 418 aa13.86□□□□□ -0.19
GTF3C1-204ENST00000564664 PLA2G4DQ86XP0 818 aa13.86□□□□□ -0.19
GTF3C1-204ENST00000564664 TMEM192Q8IY95 271 aa13.86□□□□□ -0.19
GTF3C1-204ENST00000564664 GDPD5Q8WTR4 605 aa13.86□□□□□ -0.19
GTF3C1-204ENST00000564664 CRYGNQ8WXF5 182 aa13.86□□□□□ -0.19
GTF3C1-204ENST00000564664 C17orf80Q9BSJ5 609 aa13.86□□□□□ -0.19
GTF3C1-204ENST00000564664 RNF26Q9BY78 433 aaPredicted RBP13.86□□□□□ -0.19
GTF3C1-204ENST00000564664 SH3GLB2Q9NR46 395 aa13.86□□□□□ -0.19
GTF3C1-204ENST00000564664 RNF216Q9NWF9 866 aaPredicted RBP13.86□□□□□ -0.19
GTF3C1-204ENST00000564664 MTUS1Q9ULD2 1270 aa13.86□□□□□ -0.19
GTF3C1-204ENST00000564664 CDY2AQ9Y6F7 541 aa13.86□□□□□ -0.19
GTF3C1-204ENST00000564664 KDM3AQ9Y4C1 1321 aa13.86□□□□□ -0.19
GTF3C1-204ENST00000564664 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.85□□□□□ -0.19
GTF3C1-204ENST00000564664 IPO5O00410 1097 aaKnown RBP13.85□□□□□ -0.19
GTF3C1-204ENST00000564664 NCK2O43639 380 aa13.85□□□□□ -0.19
GTF3C1-204ENST00000564664 IFNAR1P17181 557 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms