RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 GPNMBQ14956 572 aa20.8■□□□□ 0.92
SYNGR3-204ENST00000564642 GRIK4Q16099 956 aa20.8■□□□□ 0.92
SYNGR3-204ENST00000564642 FAM160B1Q5W0V3 765 aa20.8■□□□□ 0.92
SYNGR3-204ENST00000564642 KRT25Q7Z3Z0 450 aa20.8■□□□□ 0.92
SYNGR3-204ENST00000564642 MSRAQ9UJ68 235 aa20.8■□□□□ 0.92
SYNGR3-204ENST00000564642 LIMCH1Q9UPQ0 1083 aa20.8■□□□□ 0.92
SYNGR3-204ENST00000564642 TRPC6Q9Y210 931 aa20.8■□□□□ 0.92
SYNGR3-204ENST00000564642 TET1Q8NFU7 2136 aa20.8■□□□□ 0.92
SYNGR3-204ENST00000564642 TMEM265A0A087WTH1 108 aa20.79■□□□□ 0.92
SYNGR3-204ENST00000564642 CCDC194A0A1B0GVG4 234 aa20.79■□□□□ 0.92
SYNGR3-204ENST00000564642 RRN3P2A6NIE6 340 aa20.79■□□□□ 0.92
SYNGR3-204ENST00000564642 BAIAP3O94812 1187 aa20.79■□□□□ 0.92
SYNGR3-204ENST00000564642 SLC26A2P50443 739 aa20.79■□□□□ 0.92
SYNGR3-204ENST00000564642 IGBP1P78318 339 aa20.79■□□□□ 0.92
SYNGR3-204ENST00000564642 KRT76Q01546 638 aa20.79■□□□□ 0.92
SYNGR3-204ENST00000564642 NPY5RQ15761 445 aa20.79■□□□□ 0.92
SYNGR3-204ENST00000564642 RAB30Q15771 203 aa20.79■□□□□ 0.92
SYNGR3-204ENST00000564642 ZNF746Q6NUN9 644 aaPredicted RBP20.79■□□□□ 0.92
SYNGR3-204ENST00000564642 CNKSR3Q6P9H4 555 aa20.79■□□□□ 0.92
SYNGR3-204ENST00000564642 ABHD15Q6UXT9 468 aa20.79■□□□□ 0.92
SYNGR3-204ENST00000564642 TIFAQ96CG3 184 aa20.79■□□□□ 0.92
SYNGR3-204ENST00000564642 PBX4Q9BYU1 374 aa20.79■□□□□ 0.92
SYNGR3-204ENST00000564642 GBF1Q92538 1859 aa20.79■□□□□ 0.92
SYNGR3-204ENST00000564642 MYH9P35579 1960 aaKnown RBP20.78■□□□□ 0.92
SYNGR3-204ENST00000564642 IGKV6D-21A0A0A0MT36 114 aa20.78■□□□□ 0.92
SYNGR3-204ENST00000564642 POTEB3A0JP26 581 aa20.78■□□□□ 0.92
SYNGR3-204ENST00000564642 EDIL3O43854 480 aa20.78■□□□□ 0.92
SYNGR3-204ENST00000564642 CXCL10P02778 98 aa20.78■□□□□ 0.92
SYNGR3-204ENST00000564642 INSRRP14616 1297 aa20.78■□□□□ 0.92
SYNGR3-204ENST00000564642 ATP2A2P16615 1042 aaKnown RBP20.78■□□□□ 0.92
SYNGR3-204ENST00000564642 PBX2P40425 430 aa20.78■□□□□ 0.92
SYNGR3-204ENST00000564642 PLCB4Q15147 1175 aa20.78■□□□□ 0.92
SYNGR3-204ENST00000564642 SWSAP1Q6NVH7 229 aa20.78■□□□□ 0.92
SYNGR3-204ENST00000564642 TAF2Q6P1X5 1199 aa20.78■□□□□ 0.92
SYNGR3-204ENST00000564642 TRAF7Q6Q0C0 670 aa20.78■□□□□ 0.92
SYNGR3-204ENST00000564642 POTEBQ6S5H4 581 aa20.78■□□□□ 0.92
SYNGR3-204ENST00000564642 RSPH3Q86UC2 560 aa20.78■□□□□ 0.92
SYNGR3-204ENST00000564642 SMAP1Q8IYB5 467 aaPredicted RBP20.78■□□□□ 0.92
SYNGR3-204ENST00000564642 NSUN7Q8NE18 718 aaKnown RBP20.78■□□□□ 0.92
SYNGR3-204ENST00000564642 LENG9Q96B70 501 aa20.78■□□□□ 0.92
SYNGR3-204ENST00000564642 UPF2Q9HAU5 1272 aaKnown RBP20.78■□□□□ 0.92
SYNGR3-204ENST00000564642 ZNF302Q9NR11 478 aa20.78■□□□□ 0.92
SYNGR3-204ENST00000564642 GJB4Q9NTQ9 266 aa20.78■□□□□ 0.92
SYNGR3-204ENST00000564642 TUBE1Q9UJT0 475 aa20.78■□□□□ 0.92
SYNGR3-204ENST00000564642 SAMM50Q9Y512 469 aa20.78■□□□□ 0.92
SYNGR3-204ENST00000564642 UNC80Q8N2C7 3258 aa20.78■□□□□ 0.92
SYNGR3-204ENST00000564642 MSH4O15457 936 aa20.77■□□□□ 0.92
SYNGR3-204ENST00000564642 PSAPP07602 524 aa20.77■□□□□ 0.92
SYNGR3-204ENST00000564642 CTSHP09668 335 aa20.77■□□□□ 0.92
SYNGR3-204ENST00000564642 FDPSP14324 419 aaKnown RBP20.77■□□□□ 0.92
SYNGR3-204ENST00000564642 KCNJ6P48051 423 aa20.77■□□□□ 0.92
SYNGR3-204ENST00000564642 INF2Q27J81 1249 aa20.77■□□□□ 0.92
SYNGR3-204ENST00000564642 Q4G0T1 1027 aa20.77■□□□□ 0.92
SYNGR3-204ENST00000564642 PDXDC2PQ6P474 469 aa20.77■□□□□ 0.92
SYNGR3-204ENST00000564642 SLC9A7Q96T83 725 aa20.77■□□□□ 0.92
SYNGR3-204ENST00000564642 TTYH1Q9H313 450 aaPredicted RBP20.77■□□□□ 0.92
SYNGR3-204ENST00000564642 BRMS1Q9HCU9 246 aa20.77■□□□□ 0.92
SYNGR3-204ENST00000564642 PCDHA10Q9Y5I2 948 aa20.77■□□□□ 0.92
SYNGR3-204ENST00000564642 CYP3A7-CYP3A51PA0A087WV96 503 aa20.76■□□□□ 0.91
SYNGR3-204ENST00000564642 MBLAC1A4D2B0 266 aaPredicted RBP20.76■□□□□ 0.91
SYNGR3-204ENST00000564642 GAS7O60861 476 aa20.76■□□□□ 0.91
SYNGR3-204ENST00000564642 CYP3A7P24462 503 aa20.76■□□□□ 0.91
SYNGR3-204ENST00000564642 RBM25P49756 843 aaKnown RBP20.76■□□□□ 0.91
SYNGR3-204ENST00000564642 TRIM29Q14134 588 aa20.76■□□□□ 0.91
SYNGR3-204ENST00000564642 IKBKEQ14164 716 aa20.76■□□□□ 0.91
SYNGR3-204ENST00000564642 MBTPS1Q14703 1052 aa20.76■□□□□ 0.91
SYNGR3-204ENST00000564642 MARCH8Q5T0T0 291 aa20.76■□□□□ 0.91
SYNGR3-204ENST00000564642 RUFY4Q6ZNE9 571 aa20.76■□□□□ 0.91
SYNGR3-204ENST00000564642 CKAP2LQ8IYA6 745 aa20.76■□□□□ 0.91
SYNGR3-204ENST00000564642 PHOSPHO2Q8TCD6 241 aa20.76■□□□□ 0.91
SYNGR3-204ENST00000564642 ZSCAN31Q96LW9 406 aaPredicted RBP20.76■□□□□ 0.91
SYNGR3-204ENST00000564642 RIT2Q99578 217 aa20.76■□□□□ 0.91
SYNGR3-204ENST00000564642 KIF2CQ99661 725 aa20.76■□□□□ 0.91
SYNGR3-204ENST00000564642 ZNF576Q9H609 170 aa20.76■□□□□ 0.91
SYNGR3-204ENST00000564642 ABHD14A-ACY1A0A1B0GW23 586 aa20.75■□□□□ 0.91
SYNGR3-204ENST00000564642 HBP1O60381 514 aa20.75■□□□□ 0.91
SYNGR3-204ENST00000564642 TDP2O95551 362 aa20.75■□□□□ 0.91
SYNGR3-204ENST00000564642 KRT2P35908 639 aa20.75■□□□□ 0.91
SYNGR3-204ENST00000564642 RABGGTBP53611 331 aa20.75■□□□□ 0.91
SYNGR3-204ENST00000564642 LETM2Q2VYF4 491 aa20.75■□□□□ 0.91
SYNGR3-204ENST00000564642 LRCH2Q5VUJ6 765 aa20.75■□□□□ 0.91
SYNGR3-204ENST00000564642 MOXD1Q6UVY6 613 aa20.75■□□□□ 0.91
SYNGR3-204ENST00000564642 PIK3AP1Q6ZUJ8 805 aa20.75■□□□□ 0.91
SYNGR3-204ENST00000564642 CCDC60Q8IWA6 550 aaPredicted RBP20.75■□□□□ 0.91
SYNGR3-204ENST00000564642 GUCD1Q96NT3 240 aa20.75■□□□□ 0.91
SYNGR3-204ENST00000564642 TEKT3Q9BXF9 490 aa20.75■□□□□ 0.91
SYNGR3-204ENST00000564642 SLC28A3Q9HAS3 691 aa20.75■□□□□ 0.91
SYNGR3-204ENST00000564642 STXBP5LQ9Y2K9 1186 aa20.75■□□□□ 0.91
SYNGR3-204ENST00000564642 PCDHA11Q9Y5I1 949 aa20.75■□□□□ 0.91
SYNGR3-204ENST00000564642 WDR64B1ANS9 1081 aa20.74■□□□□ 0.91
SYNGR3-204ENST00000564642 JAK2O60674 1132 aa20.74■□□□□ 0.91
SYNGR3-204ENST00000564642 EFCAB14O75071 495 aa20.74■□□□□ 0.91
SYNGR3-204ENST00000564642 RPLP2P05387 115 aaKnown RBP20.74■□□□□ 0.91
SYNGR3-204ENST00000564642 FAM26DQ5JW98 314 aa20.74■□□□□ 0.91
SYNGR3-204ENST00000564642 NEK8Q86SG6 692 aa20.74■□□□□ 0.91
SYNGR3-204ENST00000564642 RPAINQ86UA6 219 aa20.74■□□□□ 0.91
SYNGR3-204ENST00000564642 CCDC83Q8IWF9 413 aa20.74■□□□□ 0.91
SYNGR3-204ENST00000564642 OXER1Q8TDS5 423 aa20.74■□□□□ 0.91
SYNGR3-204ENST00000564642 ATP8B4Q8TF62 1192 aa20.74■□□□□ 0.91
SYNGR3-204ENST00000564642 DNAJB3Q8WWF6 145 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms