RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 CENPPQ6IPU0 288 aa17.28■□□□□ 0.36
COMMD4-210ENST00000564587 CHADLQ6NUI6 762 aa17.28■□□□□ 0.36
COMMD4-210ENST00000564587 TTI2Q6NXR4 508 aa17.28■□□□□ 0.36
COMMD4-210ENST00000564587 CCDC186Q7Z3E2 898 aa17.28■□□□□ 0.36
COMMD4-210ENST00000564587 MYOCDQ8IZQ8 938 aa17.28■□□□□ 0.36
COMMD4-210ENST00000564587 KIAA0895Q8NCT3 520 aa17.28■□□□□ 0.36
COMMD4-210ENST00000564587 ZFP91Q96JP5 570 aaPredicted RBP17.28■□□□□ 0.36
COMMD4-210ENST00000564587 LXNQ9BS40 222 aa17.28■□□□□ 0.36
COMMD4-210ENST00000564587 TIPINQ9BVW5 301 aa17.28■□□□□ 0.36
COMMD4-210ENST00000564587 SLC39A2Q9NP94 309 aa17.28■□□□□ 0.36
COMMD4-210ENST00000564587 SEL1LQ9UBV2 794 aa17.28■□□□□ 0.36
COMMD4-210ENST00000564587 LIMA1Q9UHB6 759 aaKnown RBP17.28■□□□□ 0.36
COMMD4-210ENST00000564587 ODF2LQ9ULJ1 636 aa17.28■□□□□ 0.36
COMMD4-210ENST00000564587 SAMM50Q9Y512 469 aa17.28■□□□□ 0.36
COMMD4-210ENST00000564587 CCL15-CCL14A0A0B4J2E2 113 aa17.27■□□□□ 0.36
COMMD4-210ENST00000564587 A0A1B0GTH6 734 aa17.27■□□□□ 0.36
COMMD4-210ENST00000564587 TPM2P07951 284 aa17.27■□□□□ 0.36
COMMD4-210ENST00000564587 EDNRBP24530 442 aa17.27■□□□□ 0.36
COMMD4-210ENST00000564587 PSMC5P62195 406 aa17.27■□□□□ 0.36
COMMD4-210ENST00000564587 CCL15Q16663 113 aa17.27■□□□□ 0.36
COMMD4-210ENST00000564587 ARSHQ5FYA8 562 aa17.27■□□□□ 0.36
COMMD4-210ENST00000564587 SPRYD7Q5W111 196 aa17.27■□□□□ 0.36
COMMD4-210ENST00000564587 RINT1Q6NUQ1 792 aa17.27■□□□□ 0.36
COMMD4-210ENST00000564587 KCNV1Q6PIU1 500 aa17.27■□□□□ 0.36
COMMD4-210ENST00000564587 C4orf19Q8IY42 314 aa17.27■□□□□ 0.36
COMMD4-210ENST00000564587 FAM133AQ8N9E0 248 aa17.27■□□□□ 0.36
COMMD4-210ENST00000564587 CCDC150Q8NCX0 1101 aa17.27■□□□□ 0.36
COMMD4-210ENST00000564587 MS4A4AQ96JQ5 239 aa17.27■□□□□ 0.36
COMMD4-210ENST00000564587 MAPK8IP1Q9UQF2 711 aa17.27■□□□□ 0.36
COMMD4-210ENST00000564587 PCDHA10Q9Y5I2 948 aa17.27■□□□□ 0.36
COMMD4-210ENST00000564587 PCNTO95613 3336 aa17.26■□□□□ 0.35
COMMD4-210ENST00000564587 ARHGEF35A5YM69 484 aa17.26■□□□□ 0.35
COMMD4-210ENST00000564587 DDX39AO00148 427 aaKnown RBP17.26■□□□□ 0.35
COMMD4-210ENST00000564587 TGFB3P10600 412 aa17.26■□□□□ 0.35
COMMD4-210ENST00000564587 KCNA2P16389 499 aa17.26■□□□□ 0.35
COMMD4-210ENST00000564587 GUCY2CP25092 1073 aa17.26■□□□□ 0.35
COMMD4-210ENST00000564587 ERVK-9P63128 1117 aa17.26■□□□□ 0.35
COMMD4-210ENST00000564587 ERVK-24P63145 666 aa17.26■□□□□ 0.35
COMMD4-210ENST00000564587 NR1I3Q14994 352 aa17.26■□□□□ 0.35
COMMD4-210ENST00000564587 PPP4R3CPQ6ZMV5 832 aa17.26■□□□□ 0.35
COMMD4-210ENST00000564587 STXBP4Q6ZWJ1 553 aa17.26■□□□□ 0.35
COMMD4-210ENST00000564587 TMC6Q7Z403 805 aa17.26■□□□□ 0.35
COMMD4-210ENST00000564587 VSTM4Q8IW00 320 aa17.26■□□□□ 0.35
COMMD4-210ENST00000564587 CSGALNACT2Q8N6G5 542 aa17.26■□□□□ 0.35
COMMD4-210ENST00000564587 GPRC5AQ8NFJ5 357 aa17.26■□□□□ 0.35
COMMD4-210ENST00000564587 SMCR8Q8TEV9 937 aaPredicted RBP17.26■□□□□ 0.35
COMMD4-210ENST00000564587 PURBQ96QR8 312 aaKnown RBP17.26■□□□□ 0.35
COMMD4-210ENST00000564587 MMP19Q99542 508 aa17.26■□□□□ 0.35
COMMD4-210ENST00000564587 ANKEF1Q9NU02 776 aa17.26■□□□□ 0.35
COMMD4-210ENST00000564587 PKD2L1Q9P0L9 805 aa17.26■□□□□ 0.35
COMMD4-210ENST00000564587 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.26■□□□□ 0.35
COMMD4-210ENST00000564587 TRPM7Q96QT4 1865 aa17.25■□□□□ 0.35
COMMD4-210ENST00000564587 KCNJ18B7U540 433 aa17.25■□□□□ 0.35
COMMD4-210ENST00000564587 PDHXO00330 501 aa17.25■□□□□ 0.35
COMMD4-210ENST00000564587 SLC34A2O95436 690 aa17.25■□□□□ 0.35
COMMD4-210ENST00000564587 PSAPP07602 524 aa17.25■□□□□ 0.35
COMMD4-210ENST00000564587 KCNJ12Q14500 433 aa17.25■□□□□ 0.35
COMMD4-210ENST00000564587 TCP11X2Q5H9J9 407 aa17.25■□□□□ 0.35
COMMD4-210ENST00000564587 C1orf186Q6ZWK4 172 aa17.25■□□□□ 0.35
COMMD4-210ENST00000564587 PIGOQ8TEQ8 1089 aa17.25■□□□□ 0.35
COMMD4-210ENST00000564587 ATP6V0A1Q93050 837 aa17.25■□□□□ 0.35
COMMD4-210ENST00000564587 CCDC43Q96MW1 224 aaKnown RBP17.25■□□□□ 0.35
COMMD4-210ENST00000564587 NAP1L5Q96NT1 182 aaPredicted RBP17.25■□□□□ 0.35
COMMD4-210ENST00000564587 PARK7Q99497 189 aaKnown RBP17.25■□□□□ 0.35
COMMD4-210ENST00000564587 REEP2Q9BRK0 252 aa17.25■□□□□ 0.35
COMMD4-210ENST00000564587 SRRTQ9BXP5 876 aaKnown RBP17.25■□□□□ 0.35
COMMD4-210ENST00000564587 JPH1Q9HDC5 661 aaPredicted RBP17.25■□□□□ 0.35
COMMD4-210ENST00000564587 OLFML3Q9NRN5 406 aa17.25■□□□□ 0.35
COMMD4-210ENST00000564587 SLC9A2Q9UBY0 812 aa17.25■□□□□ 0.35
COMMD4-210ENST00000564587 PCDHA2Q9Y5H9 948 aa17.25■□□□□ 0.35
COMMD4-210ENST00000564587 LCTP09848 1927 aa17.25■□□□□ 0.35
COMMD4-210ENST00000564587 KIAA1217Q5T5P2 1943 aa17.25■□□□□ 0.35
COMMD4-210ENST00000564587 ATP9AO75110 1047 aa17.24■□□□□ 0.35
COMMD4-210ENST00000564587 FAM13AO94988 1023 aa17.24■□□□□ 0.35
COMMD4-210ENST00000564587 PTGS1P23219 599 aa17.24■□□□□ 0.35
COMMD4-210ENST00000564587 CNTN2Q02246 1040 aa17.24■□□□□ 0.35
COMMD4-210ENST00000564587 NEDD9Q14511 834 aa17.24■□□□□ 0.35
COMMD4-210ENST00000564587 ANKRD40Q6AI12 368 aa17.24■□□□□ 0.35
COMMD4-210ENST00000564587 MIS18BP1Q6P0N0 1132 aa17.24■□□□□ 0.35
COMMD4-210ENST00000564587 OTUD6AQ7L8S5 288 aa17.24■□□□□ 0.35
COMMD4-210ENST00000564587 FILIP1Q7Z7B0 1213 aa17.24■□□□□ 0.35
COMMD4-210ENST00000564587 BANK1Q8NDB2 785 aa17.24■□□□□ 0.35
COMMD4-210ENST00000564587 DUSP9Q99956 384 aaKnown RBP17.24■□□□□ 0.35
COMMD4-210ENST00000564587 ZHX3Q9H4I2 956 aa17.24■□□□□ 0.35
COMMD4-210ENST00000564587 TXNRD2Q9NNW7 524 aa17.24■□□□□ 0.35
COMMD4-210ENST00000564587 ZCCHC17Q9NP64 241 aaKnown RBP17.24■□□□□ 0.35
COMMD4-210ENST00000564587 RTN4Q9NQC3 1192 aaKnown RBP17.24■□□□□ 0.35
COMMD4-210ENST00000564587 MORF4L1Q9UBU8 362 aa17.24■□□□□ 0.35
COMMD4-210ENST00000564587 UBE4BO95155 1302 aa17.23■□□□□ 0.35
COMMD4-210ENST00000564587 DNAJC25-GNG10A0A024R161 153 aa17.23■□□□□ 0.35
COMMD4-210ENST00000564587 SOWAHBA6NEL2 793 aa17.23■□□□□ 0.35
COMMD4-210ENST00000564587 BTBD19C9JJ37 291 aa17.23■□□□□ 0.35
COMMD4-210ENST00000564587 STRNO43815 780 aa17.23■□□□□ 0.35
COMMD4-210ENST00000564587 RGS20O76081 388 aa17.23■□□□□ 0.35
COMMD4-210ENST00000564587 ITGBL1O95965 494 aaPredicted RBP17.23■□□□□ 0.35
COMMD4-210ENST00000564587 COPB1P53618 953 aaKnown RBP17.23■□□□□ 0.35
COMMD4-210ENST00000564587 KRT31Q15323 416 aa17.23■□□□□ 0.35
COMMD4-210ENST00000564587 Q3C1V9 767 aa17.23■□□□□ 0.35
COMMD4-210ENST00000564587 SPECC1LQ69YQ0 1117 aa17.23■□□□□ 0.35
COMMD4-210ENST00000564587 APTXQ7Z2E3 356 aaKnown RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms