RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 ZBTB10Q96DT7 871 aa22.71■■□□□ 1.23
SHCBP1-203ENST00000564272 TUBE1Q9UJT0 475 aa22.71■■□□□ 1.23
SHCBP1-203ENST00000564272 TPCN1Q9ULQ1 816 aa22.71■■□□□ 1.23
SHCBP1-203ENST00000564272 ABHD14A-ACY1A0A1B0GW23 586 aa22.7■■□□□ 1.22
SHCBP1-203ENST00000564272 IPO5O00410 1097 aaKnown RBP22.7■■□□□ 1.22
SHCBP1-203ENST00000564272 DHX15O43143 795 aaKnown RBP22.7■■□□□ 1.22
SHCBP1-203ENST00000564272 DTNBO60941 627 aa22.7■■□□□ 1.22
SHCBP1-203ENST00000564272 ARHGEF15O94989 841 aa22.7■■□□□ 1.22
SHCBP1-203ENST00000564272 SETQ01105 290 aaPredicted RBP22.7■■□□□ 1.22
SHCBP1-203ENST00000564272 IKBKEQ14164 716 aa22.7■■□□□ 1.22
SHCBP1-203ENST00000564272 PRR16Q569H4 304 aa22.7■■□□□ 1.22
SHCBP1-203ENST00000564272 MARCH8Q5T0T0 291 aa22.7■■□□□ 1.22
SHCBP1-203ENST00000564272 CPLX2Q6PUV4 134 aaKnown RBP22.7■■□□□ 1.22
SHCBP1-203ENST00000564272 DBF4BQ8NFT6 615 aa22.7■■□□□ 1.22
SHCBP1-203ENST00000564272 GAS2L1Q99501 681 aaPredicted RBP22.7■■□□□ 1.22
SHCBP1-203ENST00000564272 ZNF577Q9BSK1 485 aa22.7■■□□□ 1.22
SHCBP1-203ENST00000564272 TRPC6Q9Y210 931 aa22.7■■□□□ 1.22
SHCBP1-203ENST00000564272 SIP14410 1827 aa22.7■■□□□ 1.22
SHCBP1-203ENST00000564272 MICAL3Q7RTP6 2002 aa22.69■■□□□ 1.22
SHCBP1-203ENST00000564272 MBLAC1A4D2B0 266 aaPredicted RBP22.69■■□□□ 1.22
SHCBP1-203ENST00000564272 ATG7O95352 703 aa22.69■■□□□ 1.22
SHCBP1-203ENST00000564272 INSRRP14616 1297 aa22.69■■□□□ 1.22
SHCBP1-203ENST00000564272 CIITAP33076 1130 aa22.69■■□□□ 1.22
SHCBP1-203ENST00000564272 STAT5BP51692 787 aa22.69■■□□□ 1.22
SHCBP1-203ENST00000564272 AK2P54819 239 aa22.69■■□□□ 1.22
SHCBP1-203ENST00000564272 PLCB4Q15147 1175 aa22.69■■□□□ 1.22
SHCBP1-203ENST00000564272 PLEKHG4Q58EX7 1191 aa22.69■■□□□ 1.22
SHCBP1-203ENST00000564272 TAF2Q6P1X5 1199 aa22.69■■□□□ 1.22
SHCBP1-203ENST00000564272 SLKQ9H2G2 1235 aaPredicted RBP22.69■■□□□ 1.22
SHCBP1-203ENST00000564272 EDIL3O43854 480 aa22.68■■□□□ 1.22
SHCBP1-203ENST00000564272 TLL1O43897 1013 aa22.68■■□□□ 1.22
SHCBP1-203ENST00000564272 SEC24BO95487 1268 aa22.68■■□□□ 1.22
SHCBP1-203ENST00000564272 ADGRE1Q14246 886 aa22.68■■□□□ 1.22
SHCBP1-203ENST00000564272 ABHD15Q6UXT9 468 aa22.68■■□□□ 1.22
SHCBP1-203ENST00000564272 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.68■■□□□ 1.22
SHCBP1-203ENST00000564272 PLPPR4Q7Z2D5 763 aa22.68■■□□□ 1.22
SHCBP1-203ENST00000564272 TRAPPC12Q8WVT3 735 aa22.68■■□□□ 1.22
SHCBP1-203ENST00000564272 LENG9Q96B70 501 aa22.68■■□□□ 1.22
SHCBP1-203ENST00000564272 PCDHA4Q9UN74 947 aa22.68■■□□□ 1.22
SHCBP1-203ENST00000564272 CHD7Q9P2D1 2997 aa22.67■■□□□ 1.22
SHCBP1-203ENST00000564272 IGKV6D-21A0A0A0MT36 114 aa22.67■■□□□ 1.22
SHCBP1-203ENST00000564272 KIF28PB7ZC32 967 aa22.67■■□□□ 1.22
SHCBP1-203ENST00000564272 BACH1O14867 736 aa22.67■■□□□ 1.22
SHCBP1-203ENST00000564272 PFKFB2O60825 505 aa22.67■■□□□ 1.22
SHCBP1-203ENST00000564272 EFCAB14O75071 495 aa22.67■■□□□ 1.22
SHCBP1-203ENST00000564272 CHRNA1P02708 482 aa22.67■■□□□ 1.22
SHCBP1-203ENST00000564272 MKRN4PQ13434 485 aaPredicted RBP22.67■■□□□ 1.22
SHCBP1-203ENST00000564272 NPY5RQ15761 445 aa22.67■■□□□ 1.22
SHCBP1-203ENST00000564272 FAM26DQ5JW98 314 aa22.67■■□□□ 1.22
SHCBP1-203ENST00000564272 CCDC60Q8IWA6 550 aaPredicted RBP22.67■■□□□ 1.22
SHCBP1-203ENST00000564272 USP38Q8NB14 1042 aa22.67■■□□□ 1.22
SHCBP1-203ENST00000564272 DNAJB3Q8WWF6 145 aa22.67■■□□□ 1.22
SHCBP1-203ENST00000564272 SEPT8Q92599 483 aa22.67■■□□□ 1.22
SHCBP1-203ENST00000564272 IL17RAQ96F46 866 aa22.67■■□□□ 1.22
SHCBP1-203ENST00000564272 CERS4Q9HA82 394 aa22.67■■□□□ 1.22
SHCBP1-203ENST00000564272 EYSQ5T1H1 3165 aa22.66■■□□□ 1.22
SHCBP1-203ENST00000564272 POTEB3A0JP26 581 aa22.66■■□□□ 1.22
SHCBP1-203ENST00000564272 LCHNA4D1U4 455 aa22.66■■□□□ 1.22
SHCBP1-203ENST00000564272 RRN3P2A6NIE6 340 aa22.66■■□□□ 1.22
SHCBP1-203ENST00000564272 CDKL5O76039 1030 aa22.66■■□□□ 1.22
SHCBP1-203ENST00000564272 TAP1Q03518 808 aa22.66■■□□□ 1.22
SHCBP1-203ENST00000564272 MGAT3Q09327 533 aa22.66■■□□□ 1.22
SHCBP1-203ENST00000564272 FAM117BQ6P1L5 589 aa22.66■■□□□ 1.22
SHCBP1-203ENST00000564272 POTEBQ6S5H4 581 aa22.66■■□□□ 1.22
SHCBP1-203ENST00000564272 RPAINQ86UA6 219 aa22.66■■□□□ 1.22
SHCBP1-203ENST00000564272 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.66■■□□□ 1.22
SHCBP1-203ENST00000564272 BLIDQ8IZY5 108 aa22.66■■□□□ 1.22
SHCBP1-203ENST00000564272 TBCKQ8TEA7 893 aa22.66■■□□□ 1.22
SHCBP1-203ENST00000564272 ZBED2Q9BTP6 218 aa22.66■■□□□ 1.22
SHCBP1-203ENST00000564272 FAM49AQ9H0Q0 323 aaPredicted RBP22.66■■□□□ 1.22
SHCBP1-203ENST00000564272 M0R2N6 131 aa22.65■■□□□ 1.22
SHCBP1-203ENST00000564272 LARGE1O95461 756 aa22.65■■□□□ 1.22
SHCBP1-203ENST00000564272 IGFBP4P22692 258 aa22.65■■□□□ 1.22
SHCBP1-203ENST00000564272 ANKRD1Q15327 319 aa22.65■■□□□ 1.22
SHCBP1-203ENST00000564272 FAM160B1Q5W0V3 765 aa22.65■■□□□ 1.22
SHCBP1-203ENST00000564272 MIS18BP1Q6P0N0 1132 aa22.65■■□□□ 1.22
SHCBP1-203ENST00000564272 SPRED2Q7Z698 418 aa22.65■■□□□ 1.22
SHCBP1-203ENST00000564272 RSPH3Q86UC2 560 aa22.65■■□□□ 1.22
SHCBP1-203ENST00000564272 DAGLBQ8NCG7 672 aa22.65■■□□□ 1.22
SHCBP1-203ENST00000564272 ZNF302Q9NR11 478 aa22.65■■□□□ 1.22
SHCBP1-203ENST00000564272 TBC1D22BQ9NU19 505 aa22.65■■□□□ 1.22
SHCBP1-203ENST00000564272 KCNJ14Q9UNX9 436 aa22.65■■□□□ 1.22
SHCBP1-203ENST00000564272 STK36Q9NRP7 1315 aa22.64■■□□□ 1.22
SHCBP1-203ENST00000564272 EPOPA6NHQ4 379 aa22.64■■□□□ 1.21
SHCBP1-203ENST00000564272 GJB5O95377 273 aa22.64■■□□□ 1.21
SHCBP1-203ENST00000564272 CTDNEP1O95476 244 aa22.64■■□□□ 1.21
SHCBP1-203ENST00000564272 GHRP10912 638 aa22.64■■□□□ 1.21
SHCBP1-203ENST00000564272 SLC26A2P50443 739 aa22.64■■□□□ 1.21
SHCBP1-203ENST00000564272 ZNF746Q6NUN9 644 aaPredicted RBP22.64■■□□□ 1.21
SHCBP1-203ENST00000564272 SWSAP1Q6NVH7 229 aa22.64■■□□□ 1.21
SHCBP1-203ENST00000564272 MYOCDQ8IZQ8 938 aa22.64■■□□□ 1.21
SHCBP1-203ENST00000564272 IFIH1Q9BYX4 1025 aaKnown RBP22.64■■□□□ 1.21
SHCBP1-203ENST00000564272 CDY2AQ9Y6F7 541 aa22.64■■□□□ 1.21
SHCBP1-203ENST00000564272 RFXAPO00287 272 aa22.63■■□□□ 1.21
SHCBP1-203ENST00000564272 MSH4O15457 936 aa22.63■■□□□ 1.21
SHCBP1-203ENST00000564272 AMHP03971 560 aa22.63■■□□□ 1.21
SHCBP1-203ENST00000564272 USP11P51784 963 aa22.63■■□□□ 1.21
SHCBP1-203ENST00000564272 KRT76Q01546 638 aa22.63■■□□□ 1.21
SHCBP1-203ENST00000564272 PDXDC2PQ6P474 469 aa22.63■■□□□ 1.21
SHCBP1-203ENST00000564272 NECAB1Q8N987 351 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms